RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 CAV2P51636 162 aa11.49□□□□□ -0.57
C9orf3-217ENST00000479161 HBG1P69891 147 aa11.49□□□□□ -0.57
C9orf3-217ENST00000479161 HBG2P69892 147 aa11.49□□□□□ -0.57
C9orf3-217ENST00000479161 SAMD13Q5VXD3 122 aa11.49□□□□□ -0.57
C9orf3-217ENST00000479161 CYP2G1PQ6ZSU1 146 aa11.49□□□□□ -0.57
C9orf3-217ENST00000479161 STX12Q86Y82 276 aa11.49□□□□□ -0.57
C9orf3-217ENST00000479161 ASCL2Q99929 193 aa11.49□□□□□ -0.57
C9orf3-217ENST00000479161 SPATA25Q9BR10 227 aa11.49□□□□□ -0.57
C9orf3-217ENST00000479161 SELENOKQ9Y6D0 94 aa11.49□□□□□ -0.57
C9orf3-217ENST00000479161 IGHV3-66A0A0C4DH42 116 aa11.48□□□□□ -0.57
C9orf3-217ENST00000479161 UBE2CO00762 179 aa11.48□□□□□ -0.57
C9orf3-217ENST00000479161 PET100P0DJ07 73 aa11.48□□□□□ -0.57
C9orf3-217ENST00000479161 S100A10P60903 97 aa11.48□□□□□ -0.57
C9orf3-217ENST00000479161 LYZP61626 148 aa11.48□□□□□ -0.57
C9orf3-217ENST00000479161 RPL11P62913 178 aaKnown RBP11.48□□□□□ -0.57
C9orf3-217ENST00000479161 SLC38A11Q08AI6 406 aa11.48□□□□□ -0.57
C9orf3-217ENST00000479161 SIGLEC15Q6ZMC9 328 aa11.48□□□□□ -0.57
C9orf3-217ENST00000479161 ZNF546Q86UE3 836 aa11.48□□□□□ -0.57
C9orf3-217ENST00000479161 GPR82Q96P67 336 aa11.48□□□□□ -0.57
C9orf3-217ENST00000479161 CITED4Q96RK1 184 aa11.48□□□□□ -0.57
C9orf3-217ENST00000479161 PBDC1Q9BVG4 233 aa11.48□□□□□ -0.57
C9orf3-217ENST00000479161 GGTLC1Q9BX51 225 aa11.48□□□□□ -0.57
C9orf3-217ENST00000479161 SLC25A31Q9H0C2 315 aa11.48□□□□□ -0.57
C9orf3-217ENST00000479161 WFDC10AQ9H1F0 79 aa11.48□□□□□ -0.57
C9orf3-217ENST00000479161 NRN1Q9NPD7 142 aa11.48□□□□□ -0.57
C9orf3-217ENST00000479161 SMCO3A2RU48 225 aa11.47□□□□□ -0.57
C9orf3-217ENST00000479161 FAM24AA6NFZ4 105 aa11.47□□□□□ -0.57
C9orf3-217ENST00000479161 SIX6O95475 246 aa11.47□□□□□ -0.57
C9orf3-217ENST00000479161 RRAS2P62070 204 aaPredicted RBP11.47□□□□□ -0.57
C9orf3-217ENST00000479161 BAXQ07812 192 aa11.47□□□□□ -0.57
C9orf3-217ENST00000479161 OR2F1Q13607 317 aa11.47□□□□□ -0.57
C9orf3-217ENST00000479161 RAB31Q13636 194 aa11.47□□□□□ -0.57
C9orf3-217ENST00000479161 STPG3Q8N7X2 389 aa11.47□□□□□ -0.57
C9orf3-217ENST00000479161 PPP1R1CQ8WVI7 109 aa11.47□□□□□ -0.57
C9orf3-217ENST00000479161 ASB13Q8WXK3 278 aa11.47□□□□□ -0.57
C9orf3-217ENST00000479161 MAP6D1Q9H9H5 199 aa11.47□□□□□ -0.57
C9orf3-217ENST00000479161 UQCC1Q9NVA1 299 aa11.47□□□□□ -0.57
C9orf3-217ENST00000479161 MPDU1O75352 247 aa11.46□□□□□ -0.57
C9orf3-217ENST00000479161 CST7O76096 145 aa11.46□□□□□ -0.57
C9orf3-217ENST00000479161 APOC4P55056 127 aa11.46□□□□□ -0.57
C9orf3-217ENST00000479161 TMEM182Q6ZP80 229 aaPredicted RBP11.46□□□□□ -0.57
C9orf3-217ENST00000479161 GBGT1Q8N5D6 347 aa11.46□□□□□ -0.57
C9orf3-217ENST00000479161 WWC2-AS2Q96NR7 200 aa11.46□□□□□ -0.57
C9orf3-217ENST00000479161 RCHY1Q96PM5 261 aa11.46□□□□□ -0.57
C9orf3-217ENST00000479161 TMEM147Q9BVK8 224 aa11.46□□□□□ -0.57
C9orf3-217ENST00000479161 WDR83OSQ9Y284 106 aa11.46□□□□□ -0.57
C9orf3-217ENST00000479161 ALG5Q9Y673 324 aa11.46□□□□□ -0.57
C9orf3-217ENST00000479161 IGKV3-7A0A075B6H7 116 aa11.45□□□□□ -0.58
C9orf3-217ENST00000479161 IGSF23A1L1A6 192 aa11.45□□□□□ -0.58
C9orf3-217ENST00000479161 ZNF98A6NK75 572 aa11.45□□□□□ -0.58
C9orf3-217ENST00000479161 H0YIZ8 118 aa11.45□□□□□ -0.58
C9orf3-217ENST00000479161 AGPAT2O15120 278 aa11.45□□□□□ -0.58
C9orf3-217ENST00000479161 HYPMO75409 117 aa11.45□□□□□ -0.58
C9orf3-217ENST00000479161 MPC2O95563 127 aa11.45□□□□□ -0.58
C9orf3-217ENST00000479161 LINC00869P0C866 280 aa11.45□□□□□ -0.58
C9orf3-217ENST00000479161 MEOX2P50222 304 aa11.45□□□□□ -0.58
C9orf3-217ENST00000479161 Q6ZWC4 215 aa11.45□□□□□ -0.58
C9orf3-217ENST00000479161 STXBP6Q8NFX7 210 aa11.45□□□□□ -0.58
C9orf3-217ENST00000479161 RNF126Q9BV68 326 aa11.45□□□□□ -0.58
C9orf3-217ENST00000479161 UBQLN2Q9UHD9 624 aa11.45□□□□□ -0.58
C9orf3-217ENST00000479161 TP53TG1Q9Y2A0 90 aa11.45□□□□□ -0.58
C9orf3-217ENST00000479161 KMT2CQ8NEZ4 4911 aaKnown RBP11.45□□□□□ -0.58
C9orf3-217ENST00000479161 ELOA3CA0A087WX78 387 aaPredicted RBP11.44□□□□□ -0.58
C9orf3-217ENST00000479161 LYL1P12980 280 aa11.44□□□□□ -0.58
C9orf3-217ENST00000479161 GATA2P23769 480 aaPredicted RBP11.44□□□□□ -0.58
C9orf3-217ENST00000479161 TFPI2P48307 235 aa11.44□□□□□ -0.58
C9orf3-217ENST00000479161 RAP2BP61225 183 aa11.44□□□□□ -0.58
C9orf3-217ENST00000479161 SNRPD3P62318 126 aaKnown RBP11.44□□□□□ -0.58
C9orf3-217ENST00000479161 OR8I2Q8N0Y5 310 aa11.44□□□□□ -0.58
C9orf3-217ENST00000479161 OR1B1Q8NGR6 318 aa11.44□□□□□ -0.58
C9orf3-217ENST00000479161 SHANK2-AS3Q9BTD1 123 aa11.44□□□□□ -0.58
C9orf3-217ENST00000479161 H3BRN7 92 aa11.43□□□□□ -0.58
C9orf3-217ENST00000479161 ORM2P19652 201 aa11.43□□□□□ -0.58
C9orf3-217ENST00000479161 GALR1P47211 349 aa11.43□□□□□ -0.58
C9orf3-217ENST00000479161 RPL29P47914 159 aaKnown RBP11.43□□□□□ -0.58
C9orf3-217ENST00000479161 DEFB131AP59861 70 aa11.43□□□□□ -0.58
C9orf3-217ENST00000479161 PRR20EP86478 221 aa11.43□□□□□ -0.58
C9orf3-217ENST00000479161 PRR20CP86479 221 aa11.43□□□□□ -0.58
C9orf3-217ENST00000479161 PRR20DP86480 221 aa11.43□□□□□ -0.58
C9orf3-217ENST00000479161 PRR20BP86481 221 aa11.43□□□□□ -0.58
C9orf3-217ENST00000479161 PRR20AP86496 221 aa11.43□□□□□ -0.58
C9orf3-217ENST00000479161 WFDC3Q8IUB2 231 aa11.43□□□□□ -0.58
C9orf3-217ENST00000479161 TMEM217Q8N7C4 229 aa11.43□□□□□ -0.58
C9orf3-217ENST00000479161 MGST2Q99735 147 aa11.43□□□□□ -0.58
C9orf3-217ENST00000479161 SLC25A39Q9BZJ4 359 aaPredicted RBP11.43□□□□□ -0.58
C9orf3-217ENST00000479161 OR5AC2Q9NZP5 309 aa11.43□□□□□ -0.58
C9orf3-217ENST00000479161 HIGD1AQ9Y241 93 aa11.43□□□□□ -0.58
C9orf3-217ENST00000479161 AGRNO00468 2067 aa11.43□□□□□ -0.58
C9orf3-217ENST00000479161 ATP6V1G1O75348 118 aa11.42□□□□□ -0.58
C9orf3-217ENST00000479161 RPL7P18124 248 aaKnown RBP11.42□□□□□ -0.58
C9orf3-217ENST00000479161 CAMLGP49069 296 aa11.42□□□□□ -0.58
C9orf3-217ENST00000479161 PSMB3P49720 205 aa11.42□□□□□ -0.58
C9orf3-217ENST00000479161 EWSR1Q01844 656 aaKnown RBP eCLIP11.42□□□□□ -0.58
C9orf3-217ENST00000479161 TMEM41BQ5BJD5 291 aa11.42□□□□□ -0.58
C9orf3-217ENST00000479161 APRG1Q8IVJ8 170 aa11.42□□□□□ -0.58
C9orf3-217ENST00000479161 FAM24BQ8N5W8 94 aa11.42□□□□□ -0.58
C9orf3-217ENST00000479161 MED28Q9H204 178 aa11.42□□□□□ -0.58
C9orf3-217ENST00000479161 ISLRO14498 428 aa11.41□□□□□ -0.58
C9orf3-217ENST00000479161 SOCS3O14543 225 aa11.41□□□□□ -0.58
C9orf3-217ENST00000479161 CXCL3P19876 107 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms