RNA–Protein interactions for RNA: ENST00000478999.1

VPS45-208, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 468 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-208ENST00000478999 MYOD1P15172 320 aa6.66□□□□□ -1.34
VPS45-208ENST00000478999 PRTN3P24158 256 aa6.66□□□□□ -1.34
VPS45-208ENST00000478999 REG1BP48304 166 aa6.66□□□□□ -1.34
VPS45-208ENST00000478999 RPL15P61313 204 aaKnown RBP6.66□□□□□ -1.34
VPS45-208ENST00000478999 UBE2L3P68036 154 aaKnown RBP6.66□□□□□ -1.34
VPS45-208ENST00000478999 RPEL1Q2QD12 228 aa6.66□□□□□ -1.34
VPS45-208ENST00000478999 SPATA31B1PQ5VZV4 182 aa6.66□□□□□ -1.34
VPS45-208ENST00000478999 WDR73Q6P4I2 378 aa6.66□□□□□ -1.34
VPS45-208ENST00000478999 C1orf122Q6ZSJ8 110 aa6.66□□□□□ -1.34
VPS45-208ENST00000478999 S100A7AQ86SG5 101 aa6.66□□□□□ -1.34
VPS45-208ENST00000478999 OR11H6Q8NGC7 330 aa6.66□□□□□ -1.34
VPS45-208ENST00000478999 OR10W1Q8NGF6 305 aa6.66□□□□□ -1.34
VPS45-208ENST00000478999 OR5R1Q8NH85 324 aa6.66□□□□□ -1.34
VPS45-208ENST00000478999 OCC1Q8TAD7 63 aa6.66□□□□□ -1.34
VPS45-208ENST00000478999 RBM14Q96PK6 669 aaKnown RBP6.66□□□□□ -1.34
VPS45-208ENST00000478999 ELOVL1Q9BW60 279 aa6.66□□□□□ -1.34
VPS45-208ENST00000478999 GSN-AS1Q9NRJ2 163 aa6.66□□□□□ -1.34
VPS45-208ENST00000478999 TNFRSF19Q9NS68 423 aa6.66□□□□□ -1.34
VPS45-208ENST00000478999 ZNRD1Q9P1U0 126 aa6.66□□□□□ -1.34
VPS45-208ENST00000478999 RNF24Q9Y225 148 aa6.66□□□□□ -1.34
VPS45-208ENST00000478999 SIGLEC9Q9Y336 463 aa6.66□□□□□ -1.34
VPS45-208ENST00000478999 TNCP24821 2201 aa6.65□□□□□ -1.34
VPS45-208ENST00000478999 IGHV2-70DA0A0C4DH43 119 aa6.65□□□□□ -1.34
VPS45-208ENST00000478999 A0A0U1RQK1 487 aa6.65□□□□□ -1.34
VPS45-208ENST00000478999 ZNF320A2RRD8 509 aa6.65□□□□□ -1.34
VPS45-208ENST00000478999 XKRY2A2RUG3 117 aa6.65□□□□□ -1.34
VPS45-208ENST00000478999 CGB1A6NKQ9 187 aa6.65□□□□□ -1.34
VPS45-208ENST00000478999 LY6LH3BQJ8 138 aa6.65□□□□□ -1.34
VPS45-208ENST00000478999 ENSAO43768 121 aaKnown RBP6.65□□□□□ -1.34
VPS45-208ENST00000478999 GCGP01275 180 aa6.65□□□□□ -1.34
VPS45-208ENST00000478999 CNN1P51911 297 aaKnown RBP6.65□□□□□ -1.34
VPS45-208ENST00000478999 CCDC144NLQ6NUI1 221 aa6.65□□□□□ -1.34
VPS45-208ENST00000478999 RASL11AQ6T310 242 aa6.65□□□□□ -1.34
VPS45-208ENST00000478999 PPP1R27Q86WC6 154 aa6.65□□□□□ -1.34
VPS45-208ENST00000478999 BCL6BQ8N143 479 aaPredicted RBP6.65□□□□□ -1.34
VPS45-208ENST00000478999 NECAP1Q8NC96 275 aa6.65□□□□□ -1.34
VPS45-208ENST00000478999 TMEM37Q8WXS4 190 aa6.65□□□□□ -1.34
VPS45-208ENST00000478999 TMEM18Q96B42 140 aa6.65□□□□□ -1.34
VPS45-208ENST00000478999 FAM167A-AS1Q96KT0 104 aa6.65□□□□□ -1.34
VPS45-208ENST00000478999 PACRGQ96M98 296 aaPredicted RBP6.65□□□□□ -1.34
VPS45-208ENST00000478999 DERL1Q9BUN8 251 aa6.65□□□□□ -1.34
VPS45-208ENST00000478999 GPR61Q9BZJ8 451 aa6.65□□□□□ -1.34
VPS45-208ENST00000478999 F11RQ9Y624 299 aaKnown RBP6.65□□□□□ -1.34
VPS45-208ENST00000478999 RYR3Q15413 4870 aa6.64□□□□□ -1.35
VPS45-208ENST00000478999 IGKV1D-37A0A075B6S9 117 aa6.64□□□□□ -1.35
VPS45-208ENST00000478999 GGTLC3B5MD39 225 aa6.64□□□□□ -1.35
VPS45-208ENST00000478999 FSHBP01225 129 aa6.64□□□□□ -1.35
VPS45-208ENST00000478999 IGHV4-38-2P0DP08 117 aa6.64□□□□□ -1.35
VPS45-208ENST00000478999 HIST1H1BP16401 226 aaKnown RBP6.64□□□□□ -1.35
VPS45-208ENST00000478999 HTR1DP28221 377 aa6.64□□□□□ -1.35
VPS45-208ENST00000478999 LGALS4P56470 323 aa6.64□□□□□ -1.35
VPS45-208ENST00000478999 ZNF90Q03938 601 aa6.64□□□□□ -1.35
VPS45-208ENST00000478999 MRGPRG-AS1Q2M3A8 158 aa6.64□□□□□ -1.35
VPS45-208ENST00000478999 CENPWQ5EE01 88 aa6.64□□□□□ -1.35
VPS45-208ENST00000478999 FAM231DQ6ZW35 169 aa6.64□□□□□ -1.35
VPS45-208ENST00000478999 MOB3BQ86TA1 216 aa6.64□□□□□ -1.35
VPS45-208ENST00000478999 OR5AU1Q8NGC0 362 aa6.64□□□□□ -1.35
VPS45-208ENST00000478999 OR10D4PQ8NGN7 298 aa6.64□□□□□ -1.35
VPS45-208ENST00000478999 NPIPB3Q92617 1050 aa6.64□□□□□ -1.35
VPS45-208ENST00000478999 ZNF503Q96F45 646 aa6.64□□□□□ -1.35
VPS45-208ENST00000478999 HIST1H2BLQ99880 126 aa6.64□□□□□ -1.35
VPS45-208ENST00000478999 PAXXQ9BUH6 204 aa6.64□□□□□ -1.35
VPS45-208ENST00000478999 SLC25A2Q9BXI2 301 aa6.64□□□□□ -1.35
VPS45-208ENST00000478999 FNDC4Q9H6D8 234 aaPredicted RBP6.64□□□□□ -1.35
VPS45-208ENST00000478999 ZNF355PQ9NSJ1 428 aa6.64□□□□□ -1.35
VPS45-208ENST00000478999 DPM3Q9P2X0 92 aa6.64□□□□□ -1.35
VPS45-208ENST00000478999 POLR3KQ9Y2Y1 108 aaPredicted RBP6.64□□□□□ -1.35
VPS45-208ENST00000478999 TRAPPC1Q9Y5R8 145 aa6.64□□□□□ -1.35
VPS45-208ENST00000478999 HYPMO75409 117 aa6.63□□□□□ -1.35
VPS45-208ENST00000478999 SCGB2A1O75556 95 aa6.63□□□□□ -1.35
VPS45-208ENST00000478999 RNASE1P07998 156 aaKnown RBP6.63□□□□□ -1.35
VPS45-208ENST00000478999 FABP4P15090 132 aa6.63□□□□□ -1.35
VPS45-208ENST00000478999 CRYBB3P26998 211 aa6.63□□□□□ -1.35
VPS45-208ENST00000478999 S100A7P31151 101 aa6.63□□□□□ -1.35
VPS45-208ENST00000478999 ERVFC1-1P60608 527 aa6.63□□□□□ -1.35
VPS45-208ENST00000478999 PAX8Q06710 450 aa6.63□□□□□ -1.35
VPS45-208ENST00000478999 DIAPH2-AS1Q14236 149 aa6.63□□□□□ -1.35
VPS45-208ENST00000478999 JOSD1Q15040 202 aaPredicted RBP6.63□□□□□ -1.35
VPS45-208ENST00000478999 TNXAQ16473 311 aa6.63□□□□□ -1.35
VPS45-208ENST00000478999 PYY3Q5JQD4 70 aa6.63□□□□□ -1.35
VPS45-208ENST00000478999 KLF17Q5JT82 389 aaPredicted RBP6.63□□□□□ -1.35
VPS45-208ENST00000478999 TPTE2P1Q5T6R2 138 aa6.63□□□□□ -1.35
VPS45-208ENST00000478999 MINOS1Q5TGZ0 78 aa6.63□□□□□ -1.35
VPS45-208ENST00000478999 BRD3OSQ6XYD6 125 aa6.63□□□□□ -1.35
VPS45-208ENST00000478999 NPBQ8NG41 125 aa6.63□□□□□ -1.35
VPS45-208ENST00000478999 OR2T6Q8NHC8 308 aa6.63□□□□□ -1.35
VPS45-208ENST00000478999 SRSF12Q8WXF0 261 aaKnown RBP6.63□□□□□ -1.35
VPS45-208ENST00000478999 IGF2BP2-AS1Q96M15 143 aa6.63□□□□□ -1.35
VPS45-208ENST00000478999 ZNF48Q96MX3 618 aaPredicted RBP6.63□□□□□ -1.35
VPS45-208ENST00000478999 GNB1LQ9BYB4 327 aa6.63□□□□□ -1.35
VPS45-208ENST00000478999 TMEM14CQ9P0S9 112 aa6.63□□□□□ -1.35
VPS45-208ENST00000478999 MINOS1-NBL1R4GNA1 71 aa6.63□□□□□ -1.35
VPS45-208ENST00000478999 TRAV30A0A087WSZ9 112 aa6.62□□□□□ -1.35
VPS45-208ENST00000478999 ODF3BA8MYP8 253 aa6.62□□□□□ -1.35
VPS45-208ENST00000478999 TEX22C9J3V5 150 aa6.62□□□□□ -1.35
VPS45-208ENST00000478999 E7EUB6 86 aa6.62□□□□□ -1.35
VPS45-208ENST00000478999 TSTD3H0UI37 97 aa6.62□□□□□ -1.35
VPS45-208ENST00000478999 K7EN84 100 aa6.62□□□□□ -1.35
VPS45-208ENST00000478999 PEX7O00628 323 aa6.62□□□□□ -1.35
VPS45-208ENST00000478999 NBR2O15453 112 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms