RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 ARL2-SNX15V9GYD0 113 aa8.62□□□□□ -1.03
VPS52-217ENST00000478934 IZUMO1RA6ND01 250 aa8.61□□□□□ -1.03
VPS52-217ENST00000478934 B9A039 149 aa8.61□□□□□ -1.03
VPS52-217ENST00000478934 TEX22C9J3V5 150 aa8.61□□□□□ -1.03
VPS52-217ENST00000478934 FOXA3P55318 350 aaPredicted RBP8.61□□□□□ -1.03
VPS52-217ENST00000478934 KLF17Q5JT82 389 aaPredicted RBP8.61□□□□□ -1.03
VPS52-217ENST00000478934 WDR73Q6P4I2 378 aa8.61□□□□□ -1.03
VPS52-217ENST00000478934 NIT1Q86X76 327 aa8.61□□□□□ -1.03
VPS52-217ENST00000478934 C8orf31Q8N9H6 132 aa8.61□□□□□ -1.03
VPS52-217ENST00000478934 OR2D3Q8NGH3 330 aa8.61□□□□□ -1.03
VPS52-217ENST00000478934 MIEN1Q9BRT3 115 aa8.61□□□□□ -1.03
VPS52-217ENST00000478934 NGBQ9NPG2 151 aa8.61□□□□□ -1.03
VPS52-217ENST00000478934 ZNF586Q9NXT0 402 aa8.61□□□□□ -1.03
VPS52-217ENST00000478934 HILPDAQ9Y5L2 63 aa8.61□□□□□ -1.03
VPS52-217ENST00000478934 ZNF324O75467 553 aaPredicted RBP8.61□□□□□ -1.03
VPS52-217ENST00000478934 LGALS7P47929 136 aa8.61□□□□□ -1.03
VPS52-217ENST00000478934 ARF6P62330 175 aa8.61□□□□□ -1.03
VPS52-217ENST00000478934 KLRD1Q13241 179 aa8.61□□□□□ -1.03
VPS52-217ENST00000478934 SPATA45Q537H7 98 aa8.61□□□□□ -1.03
VPS52-217ENST00000478934 PPP1R27Q86WC6 154 aa8.61□□□□□ -1.03
VPS52-217ENST00000478934 OR1L4Q8NGR5 311 aa8.61□□□□□ -1.03
VPS52-217ENST00000478934 C18orf32Q8TCD1 76 aa8.61□□□□□ -1.03
VPS52-217ENST00000478934 TRBV9A0A0B4J1U6 114 aa8.6□□□□□ -1.03
VPS52-217ENST00000478934 CRYGCP07315 174 aa8.6□□□□□ -1.03
VPS52-217ENST00000478934 BPIFB3P59826 476 aa8.6□□□□□ -1.03
VPS52-217ENST00000478934 UBE2G1P62253 170 aa8.6□□□□□ -1.03
VPS52-217ENST00000478934 MMDQ15546 238 aa8.6□□□□□ -1.03
VPS52-217ENST00000478934 ZNF672Q499Z4 452 aaPredicted RBP8.6□□□□□ -1.03
VPS52-217ENST00000478934 VKORC1Q9BQB6 163 aa8.6□□□□□ -1.03
VPS52-217ENST00000478934 SPTAN1Q13813 2472 aaKnown RBP8.6□□□□□ -1.03
VPS52-217ENST00000478934 HLA-DQA1P01909 254 aa8.6□□□□□ -1.03
VPS52-217ENST00000478934 NBEAP1P0C6P0 100 aa8.6□□□□□ -1.03
VPS52-217ENST00000478934 MYCNOSP40205 109 aa8.6□□□□□ -1.03
VPS52-217ENST00000478934 LYZP61626 148 aa8.6□□□□□ -1.03
VPS52-217ENST00000478934 ZNF124Q15973 351 aa8.6□□□□□ -1.03
VPS52-217ENST00000478934 FAM71F2Q6NXP2 309 aa8.6□□□□□ -1.03
VPS52-217ENST00000478934 RNASEKQ6P5S7 137 aaKnown RBP8.6□□□□□ -1.03
VPS52-217ENST00000478934 BCL6BQ8N143 479 aaPredicted RBP8.6□□□□□ -1.03
VPS52-217ENST00000478934 CLEC7AQ9BXN2 247 aa8.6□□□□□ -1.03
VPS52-217ENST00000478934 CCL21O00585 134 aa8.59□□□□□ -1.03
VPS52-217ENST00000478934 TIMM23O14925 209 aa8.59□□□□□ -1.03
VPS52-217ENST00000478934 MT-ND6P03923 174 aa8.59□□□□□ -1.03
VPS52-217ENST00000478934 PSG1P11464 419 aa8.59□□□□□ -1.03
VPS52-217ENST00000478934 PLGLAQ15195 96 aa8.59□□□□□ -1.03
VPS52-217ENST00000478934 OR10J3Q5JRS4 329 aa8.59□□□□□ -1.03
VPS52-217ENST00000478934 TEX45Q8NA69 505 aa8.59□□□□□ -1.03
VPS52-217ENST00000478934 RPEQ96AT9 228 aa8.59□□□□□ -1.03
VPS52-217ENST00000478934 C17orf77Q96MU5 243 aa8.59□□□□□ -1.03
VPS52-217ENST00000478934 EPDR1Q9UM22 224 aa8.59□□□□□ -1.03
VPS52-217ENST00000478934 RBP4P02753 201 aa8.59□□□□□ -1.03
VPS52-217ENST00000478934 PRRX1P54821 245 aa8.59□□□□□ -1.03
VPS52-217ENST00000478934 EXOC3-AS1Q8N2X6 119 aa8.59□□□□□ -1.03
VPS52-217ENST00000478934 SRSF12Q8WXF0 261 aaKnown RBP8.59□□□□□ -1.03
VPS52-217ENST00000478934 MBD6Q96DN6 1003 aa8.59□□□□□ -1.03
VPS52-217ENST00000478934 PGLYRP4Q96LB8 373 aa8.59□□□□□ -1.03
VPS52-217ENST00000478934 C20orf144Q9BQM9 153 aa8.59□□□□□ -1.03
VPS52-217ENST00000478934 CLEC5AQ9NY25 188 aa8.59□□□□□ -1.03
VPS52-217ENST00000478934 RAXQ9Y2V3 346 aa8.59□□□□□ -1.03
VPS52-217ENST00000478934 HYPMO75409 117 aa8.58□□□□□ -1.04
VPS52-217ENST00000478934 NPSP0C0P6 89 aa8.58□□□□□ -1.04
VPS52-217ENST00000478934 RBPJQ06330 500 aa8.58□□□□□ -1.04
VPS52-217ENST00000478934 Q56UQ5 140 aa8.58□□□□□ -1.04
VPS52-217ENST00000478934 Q6ZVH6 145 aa8.58□□□□□ -1.04
VPS52-217ENST00000478934 PERPQ96FX8 193 aa8.58□□□□□ -1.04
VPS52-217ENST00000478934 RNF2Q99496 336 aa8.58□□□□□ -1.04
VPS52-217ENST00000478934 C7orf69Q9H7B7 122 aa8.58□□□□□ -1.04
VPS52-217ENST00000478934 TIMM8BQ9Y5J9 83 aaPredicted RBP8.58□□□□□ -1.04
VPS52-217ENST00000478934 ITPR1Q14643 2758 aa8.58□□□□□ -1.04
VPS52-217ENST00000478934 GP9P14770 177 aa8.58□□□□□ -1.04
VPS52-217ENST00000478934 SPATA12Q7Z6I5 190 aa8.58□□□□□ -1.04
VPS52-217ENST00000478934 CIARTQ8N365 385 aaPredicted RBP8.58□□□□□ -1.04
VPS52-217ENST00000478934 TMEM116Q8NCL8 245 aa8.58□□□□□ -1.04
VPS52-217ENST00000478934 MCRIP2Q9BUT9 160 aaKnown RBP8.58□□□□□ -1.04
VPS52-217ENST00000478934 F11RQ9Y624 299 aaKnown RBP8.58□□□□□ -1.04
VPS52-217ENST00000478934 HSBP1O75506 76 aa8.57□□□□□ -1.04
VPS52-217ENST00000478934 CNIH1O95406 144 aa8.57□□□□□ -1.04
VPS52-217ENST00000478934 RPLP1P05386 114 aaKnown RBP8.57□□□□□ -1.04
VPS52-217ENST00000478934 ZNF138P52744 262 aa8.57□□□□□ -1.04
VPS52-217ENST00000478934 RPL19P84098 196 aaKnown RBP8.57□□□□□ -1.04
VPS52-217ENST00000478934 GTSF1Q8WW33 167 aa8.57□□□□□ -1.04
VPS52-217ENST00000478934 BORCS7Q96B45 105 aa8.57□□□□□ -1.04
VPS52-217ENST00000478934 TRGV9Q99603 122 aa8.57□□□□□ -1.04
VPS52-217ENST00000478934 Q9H3A6 140 aa8.57□□□□□ -1.04
VPS52-217ENST00000478934 M0R2Z0 102 aa8.57□□□□□ -1.04
VPS52-217ENST00000478934 IGLC1P0CG04 106 aa8.57□□□□□ -1.04
VPS52-217ENST00000478934 EBLN2Q6P2I7 272 aa8.57□□□□□ -1.04
VPS52-217ENST00000478934 GRAMD2BQ96HH9 432 aa8.57□□□□□ -1.04
VPS52-217ENST00000478934 TMEM208Q9BTX3 173 aa8.57□□□□□ -1.04
VPS52-217ENST00000478934 LPAR2Q9HBW0 351 aa8.57□□□□□ -1.04
VPS52-217ENST00000478934 LY6LH3BQJ8 138 aa8.56□□□□□ -1.04
VPS52-217ENST00000478934 I3L2K1 104 aa8.56□□□□□ -1.04
VPS52-217ENST00000478934 CTRLP40313 264 aa8.56□□□□□ -1.04
VPS52-217ENST00000478934 ADORA2A-AS1P86434 159 aa8.56□□□□□ -1.04
VPS52-217ENST00000478934 PVRIGQ6DKI7 326 aa8.56□□□□□ -1.04
VPS52-217ENST00000478934 LINC00173Q6ZV60 143 aa8.56□□□□□ -1.04
VPS52-217ENST00000478934 TXN2Q99757 166 aa8.56□□□□□ -1.04
VPS52-217ENST00000478934 H0Y8G0 127 aa8.56□□□□□ -1.04
VPS52-217ENST00000478934 NDUFS7O75251 213 aa8.56□□□□□ -1.04
VPS52-217ENST00000478934 IGKV1-17P01599 117 aa8.56□□□□□ -1.04
VPS52-217ENST00000478934 ETFRF1Q6IPR1 90 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 185.6 ms