RNA–Protein interactions for RNA: ENST00000478644.1

HOXB3-209, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 398 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-209ENST00000478644 MRPL53Q96EL3 112 aaKnown RBP4.71□□□□□ -1.66
HOXB3-209ENST00000478644 SDHCQ99643 169 aaPredicted RBP4.71□□□□□ -1.66
HOXB3-209ENST00000478644 GGTLC1Q9BX51 225 aa4.71□□□□□ -1.66
HOXB3-209ENST00000478644 ZNF436Q9C0F3 470 aaPredicted RBP4.71□□□□□ -1.66
HOXB3-209ENST00000478644 HIPK2Q9H2X6 1198 aa4.71□□□□□ -1.66
HOXB3-209ENST00000478644 DAZ1Q9NQZ3 744 aaKnown RBP4.71□□□□□ -1.66
HOXB3-209ENST00000478644 KCNIP3Q9Y2W7 256 aa4.71□□□□□ -1.66
HOXB3-209ENST00000478644 F11RQ9Y624 299 aaKnown RBP4.71□□□□□ -1.66
HOXB3-209ENST00000478644 STAB2Q8WWQ8 2551 aa4.71□□□□□ -1.66
HOXB3-209ENST00000478644 PIGBOS1A0A0B4J2F0 54 aa4.7□□□□□ -1.66
HOXB3-209ENST00000478644 NUPR2A6NF83 97 aa4.7□□□□□ -1.66
HOXB3-209ENST00000478644 OR4C46A6NHA9 309 aa4.7□□□□□ -1.66
HOXB3-209ENST00000478644 C15orf62A8K5M9 175 aa4.7□□□□□ -1.66
HOXB3-209ENST00000478644 CORTO00230 105 aa4.7□□□□□ -1.66
HOXB3-209ENST00000478644 TGOLN2O43493 480 aa4.7□□□□□ -1.66
HOXB3-209ENST00000478644 TRBV12-3P01733 135 aa4.7□□□□□ -1.66
HOXB3-209ENST00000478644 REG1AP05451 166 aa4.7□□□□□ -1.66
HOXB3-209ENST00000478644 SUB1P53999 127 aaKnown RBP eCLIP4.7□□□□□ -1.66
HOXB3-209ENST00000478644 SUPT4H1P63272 117 aaKnown RBP4.7□□□□□ -1.66
HOXB3-209ENST00000478644 SRPXP78539 464 aa4.7□□□□□ -1.66
HOXB3-209ENST00000478644 TNFRSF9Q07011 255 aa4.7□□□□□ -1.66
HOXB3-209ENST00000478644 TMEM187Q14656 261 aa4.7□□□□□ -1.66
HOXB3-209ENST00000478644 PVRIGQ6DKI7 326 aa4.7□□□□□ -1.66
HOXB3-209ENST00000478644 CLEC19AQ6UXS0 136 aa4.7□□□□□ -1.66
HOXB3-209ENST00000478644 NRACQ8N912 160 aa4.7□□□□□ -1.66
HOXB3-209ENST00000478644 ZNF114Q8NC26 417 aa4.7□□□□□ -1.66
HOXB3-209ENST00000478644 OR52E5Q8NH55 327 aa4.7□□□□□ -1.66
HOXB3-209ENST00000478644 LHFPL5Q8TAF8 219 aa4.7□□□□□ -1.66
HOXB3-209ENST00000478644 ZNF502Q8TBZ5 544 aa4.7□□□□□ -1.66
HOXB3-209ENST00000478644 RBPMSQ93062 196 aaKnown RBP4.7□□□□□ -1.66
HOXB3-209ENST00000478644 C7orf50Q9BRJ6 194 aaKnown RBP4.7□□□□□ -1.66
HOXB3-209ENST00000478644 NDUFAF3Q9BU61 184 aa4.7□□□□□ -1.66
HOXB3-209ENST00000478644 HINT2Q9BX68 163 aa4.7□□□□□ -1.66
HOXB3-209ENST00000478644 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.7□□□□□ -1.66
HOXB3-209ENST00000478644 NUDT15Q9NV35 164 aa4.7□□□□□ -1.66
HOXB3-209ENST00000478644 KLK5Q9Y337 293 aaPredicted RBP4.7□□□□□ -1.66
HOXB3-209ENST00000478644 DNAH7Q8WXX0 4024 aa4.69□□□□□ -1.66
HOXB3-209ENST00000478644 A0A0B4J2A0 478 aa4.69□□□□□ -1.66
HOXB3-209ENST00000478644 A0A0G2JRQ6 117 aa4.69□□□□□ -1.66
HOXB3-209ENST00000478644 E5RGE8 158 aa4.69□□□□□ -1.66
HOXB3-209ENST00000478644 PPP5D1E7EU14 171 aa4.69□□□□□ -1.66
HOXB3-209ENST00000478644 NUPL2O15504 423 aaKnown RBP4.69□□□□□ -1.66
HOXB3-209ENST00000478644 NDUFB6O95139 128 aa4.69□□□□□ -1.66
HOXB3-209ENST00000478644 STAG3L2P0CL84 134 aa4.69□□□□□ -1.66
HOXB3-209ENST00000478644 ANXA3P12429 323 aa4.69□□□□□ -1.66
HOXB3-209ENST00000478644 IL7P13232 177 aa4.69□□□□□ -1.66
HOXB3-209ENST00000478644 AKR1C4P17516 323 aa4.69□□□□□ -1.66
HOXB3-209ENST00000478644 AKR1C2P52895 323 aa4.69□□□□□ -1.66
HOXB3-209ENST00000478644 MFAP2P55001 183 aa4.69□□□□□ -1.66
HOXB3-209ENST00000478644 TCTAP57738 103 aa4.69□□□□□ -1.66
HOXB3-209ENST00000478644 SPCS3P61009 180 aa4.69□□□□□ -1.66
HOXB3-209ENST00000478644 UBE2MP61081 183 aaKnown RBP4.69□□□□□ -1.66
HOXB3-209ENST00000478644 ERHP84090 104 aaKnown RBP4.69□□□□□ -1.66
HOXB3-209ENST00000478644 DEFA5Q01523 94 aa4.69□□□□□ -1.66
HOXB3-209ENST00000478644 COTL1Q14019 142 aa4.69□□□□□ -1.66
HOXB3-209ENST00000478644 RBMS2Q15434 407 aaKnown RBP4.69□□□□□ -1.66
HOXB3-209ENST00000478644 IZUMO4Q1ZYL8 232 aa4.69□□□□□ -1.66
HOXB3-209ENST00000478644 CNPY1Q3B7I2 92 aa4.69□□□□□ -1.66
HOXB3-209ENST00000478644 TMEM128Q5BJH2 165 aa4.69□□□□□ -1.66
HOXB3-209ENST00000478644 TRIQKQ629K1 86 aa4.69□□□□□ -1.66
HOXB3-209ENST00000478644 LRTM2Q8N967 370 aa4.69□□□□□ -1.66
HOXB3-209ENST00000478644 GATAD1Q8WUU5 269 aa4.69□□□□□ -1.66
HOXB3-209ENST00000478644 GPR146Q96CH1 333 aa4.69□□□□□ -1.66
HOXB3-209ENST00000478644 GINS3Q9BRX5 216 aa4.69□□□□□ -1.66
HOXB3-209ENST00000478644 PLEKHA3Q9HB20 300 aa4.69□□□□□ -1.66
HOXB3-209ENST00000478644 BATF3Q9NR55 127 aa4.69□□□□□ -1.66
HOXB3-209ENST00000478644 C21orf62Q9NYP8 219 aa4.69□□□□□ -1.66
HOXB3-209ENST00000478644 SHPKQ9UHJ6 478 aa4.69□□□□□ -1.66
HOXB3-209ENST00000478644 TBC1D24Q9ULP9 559 aa4.69□□□□□ -1.66
HOXB3-209ENST00000478644 RYR3Q15413 4870 aa4.68□□□□□ -1.66
HOXB3-209ENST00000478644 TRAV2A0A0B4J234 112 aa4.68□□□□□ -1.66
HOXB3-209ENST00000478644 DUXBA0A1W2PPF3 345 aa4.68□□□□□ -1.66
HOXB3-209ENST00000478644 A0A1W2PS18 150 aa4.68□□□□□ -1.66
HOXB3-209ENST00000478644 TMEM213A2RRL7 107 aa4.68□□□□□ -1.66
HOXB3-209ENST00000478644 IZUMO1RA6ND01 250 aa4.68□□□□□ -1.66
HOXB3-209ENST00000478644 CENPXA8MT69 81 aa4.68□□□□□ -1.66
HOXB3-209ENST00000478644 I3L2K1 104 aa4.68□□□□□ -1.66
HOXB3-209ENST00000478644 K7EIM0 57 aa4.68□□□□□ -1.66
HOXB3-209ENST00000478644 IFNA17P01571 189 aa4.68□□□□□ -1.66
HOXB3-209ENST00000478644 HLA-AP01891 365 aaKnown RBP4.68□□□□□ -1.66
HOXB3-209ENST00000478644 CD7P09564 240 aa4.68□□□□□ -1.66
HOXB3-209ENST00000478644 NKX2-1P43699 371 aaPredicted RBP4.68□□□□□ -1.66
HOXB3-209ENST00000478644 INPP1P49441 399 aa4.68□□□□□ -1.66
HOXB3-209ENST00000478644 CCR6P51684 374 aa4.68□□□□□ -1.66
HOXB3-209ENST00000478644 SEC61BP60468 96 aaKnown RBP4.68□□□□□ -1.66
HOXB3-209ENST00000478644 ZNF415Q09FC8 603 aa4.68□□□□□ -1.66
HOXB3-209ENST00000478644 BSXQ3C1V8 233 aa4.68□□□□□ -1.66
HOXB3-209ENST00000478644 LINC01620Q4KN68 170 aa4.68□□□□□ -1.66
HOXB3-209ENST00000478644 NMSQ5H8A3 153 aa4.68□□□□□ -1.66
HOXB3-209ENST00000478644 ZFAND6Q6FIF0 208 aa4.68□□□□□ -1.66
HOXB3-209ENST00000478644 ADAMTSL5Q6ZMM2 481 aa4.68□□□□□ -1.66
HOXB3-209ENST00000478644 TMEM61Q8N0U2 210 aa4.68□□□□□ -1.66
HOXB3-209ENST00000478644 LGI3Q8N145 548 aa4.68□□□□□ -1.66
HOXB3-209ENST00000478644 CENPSQ8N2Z9 138 aa4.68□□□□□ -1.66
HOXB3-209ENST00000478644 DEFB125Q8N687 156 aa4.68□□□□□ -1.66
HOXB3-209ENST00000478644 S100ZQ8WXG8 99 aa4.68□□□□□ -1.66
HOXB3-209ENST00000478644 TMEM190Q8WZ59 177 aa4.68□□□□□ -1.66
HOXB3-209ENST00000478644 PDCD10Q9BUL8 212 aa4.68□□□□□ -1.66
HOXB3-209ENST00000478644 CCDC32Q9BV29 185 aa4.68□□□□□ -1.66
HOXB3-209ENST00000478644 MFFQ9GZY8 342 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms