RNA–Protein interactions for RNA: ENST00000478451.1

GPNMB-210, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 862 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-210ENST00000478451 APCSP02743 223 aa3.42□□□□□ -1.86
GPNMB-210ENST00000478451 LIPFP07098 398 aa3.42□□□□□ -1.86
GPNMB-210ENST00000478451 GPX1P07203 203 aa3.42□□□□□ -1.86
GPNMB-210ENST00000478451 SNRPCP09234 159 aaKnown RBP3.42□□□□□ -1.86
GPNMB-210ENST00000478451 SP9P0CG40 484 aa3.42□□□□□ -1.86
GPNMB-210ENST00000478451 MGST1P10620 155 aaKnown RBP3.42□□□□□ -1.86
GPNMB-210ENST00000478451 CD59P13987 128 aa3.42□□□□□ -1.86
GPNMB-210ENST00000478451 PMCHP20382 165 aa3.42□□□□□ -1.86
GPNMB-210ENST00000478451 HNF1AP20823 631 aa3.42□□□□□ -1.86
GPNMB-210ENST00000478451 CBLN1P23435 193 aa3.42□□□□□ -1.86
GPNMB-210ENST00000478451 CRYBB3P26998 211 aa3.42□□□□□ -1.86
GPNMB-210ENST00000478451 CA7P43166 264 aa3.42□□□□□ -1.86
GPNMB-210ENST00000478451 KRTDAPP60985 99 aa3.42□□□□□ -1.86
GPNMB-210ENST00000478451 TNFAIP6P98066 277 aaPredicted RBP3.42□□□□□ -1.86
GPNMB-210ENST00000478451 LPAL2Q16609 132 aa3.42□□□□□ -1.86
GPNMB-210ENST00000478451 C17orf58Q2M2W7 97 aa3.42□□□□□ -1.86
GPNMB-210ENST00000478451 GCSAMLQ5JQS6 135 aa3.42□□□□□ -1.86
GPNMB-210ENST00000478451 TPTE2P1Q5T6R2 138 aa3.42□□□□□ -1.86
GPNMB-210ENST00000478451 C10orf113Q5VZT2 155 aa3.42□□□□□ -1.86
GPNMB-210ENST00000478451 STUMQ69YW2 141 aa3.42□□□□□ -1.86
GPNMB-210ENST00000478451 TMEM136Q6ZRR5 245 aa3.42□□□□□ -1.86
GPNMB-210ENST00000478451 SLC25A48Q6ZT89 311 aaKnown RBP3.42□□□□□ -1.86
GPNMB-210ENST00000478451 MIR17HGQ75NE6 70 aa3.42□□□□□ -1.86
GPNMB-210ENST00000478451 TCF23Q7RTU1 214 aa3.42□□□□□ -1.86
GPNMB-210ENST00000478451 ASCL5Q7RTU5 278 aa3.42□□□□□ -1.86
GPNMB-210ENST00000478451 S100A7AQ86SG5 101 aa3.42□□□□□ -1.86
GPNMB-210ENST00000478451 PDPNQ86YL7 162 aa3.42□□□□□ -1.86
GPNMB-210ENST00000478451 ZADH2Q8N4Q0 377 aa3.42□□□□□ -1.86
GPNMB-210ENST00000478451 C8orf31Q8N9H6 132 aa3.42□□□□□ -1.86
GPNMB-210ENST00000478451 OR10X1Q8NGY0 326 aa3.42□□□□□ -1.86
GPNMB-210ENST00000478451 VN1R17PQ8TDU5 208 aa3.42□□□□□ -1.86
GPNMB-210ENST00000478451 SNHG12Q9BXW3 62 aa3.42□□□□□ -1.86
GPNMB-210ENST00000478451 ZNF430Q9H8G1 570 aaPredicted RBP3.42□□□□□ -1.86
GPNMB-210ENST00000478451 LINC00574Q9H8X3 128 aa3.42□□□□□ -1.86
GPNMB-210ENST00000478451 ZNF71Q9NQZ8 489 aaPredicted RBP3.42□□□□□ -1.86
GPNMB-210ENST00000478451 RPUSD1Q9UJJ7 312 aaKnown RBP3.42□□□□□ -1.86
GPNMB-210ENST00000478451 CBY1Q9Y3M2 126 aa3.42□□□□□ -1.86
GPNMB-210ENST00000478451 SLC25A15Q9Y619 301 aa3.42□□□□□ -1.86
GPNMB-210ENST00000478451 LINC00312Q9Y6C7 94 aa3.42□□□□□ -1.86
GPNMB-210ENST00000478451 CACNA1DQ01668 2161 aa3.42□□□□□ -1.86
GPNMB-210ENST00000478451 TECTAO75443 2155 aa3.41□□□□□ -1.86
GPNMB-210ENST00000478451 TRAV3A0A0B4J244 114 aa3.41□□□□□ -1.86
GPNMB-210ENST00000478451 TEX50A0A1B0GTY4 177 aa3.41□□□□□ -1.86
GPNMB-210ENST00000478451 TCRBV4S1A1TA0A5B7 111 aa3.41□□□□□ -1.86
GPNMB-210ENST00000478451 DPRXA6NFQ7 191 aa3.41□□□□□ -1.86
GPNMB-210ENST00000478451 M0R1B8 84 aa3.41□□□□□ -1.86
GPNMB-210ENST00000478451 SLC17A3O00476 420 aa3.41□□□□□ -1.86
GPNMB-210ENST00000478451 DLEU1O43261 78 aa3.41□□□□□ -1.86
GPNMB-210ENST00000478451 ZNF324O75467 553 aaPredicted RBP3.41□□□□□ -1.86
GPNMB-210ENST00000478451 HSBP1O75506 76 aa3.41□□□□□ -1.86
GPNMB-210ENST00000478451 LINC00869P0C866 280 aa3.41□□□□□ -1.86
GPNMB-210ENST00000478451 CGB3P0DN86 165 aa3.41□□□□□ -1.86
GPNMB-210ENST00000478451 CGB7P0DN87 165 aa3.41□□□□□ -1.86
GPNMB-210ENST00000478451 RNASE2P10153 161 aaKnown RBP3.41□□□□□ -1.86
GPNMB-210ENST00000478451 DEFA4P12838 97 aa3.41□□□□□ -1.86
GPNMB-210ENST00000478451 ZNF25P17030 456 aaPredicted RBP3.41□□□□□ -1.86
GPNMB-210ENST00000478451 SRIP30626 198 aa3.41□□□□□ -1.86
GPNMB-210ENST00000478451 ZNF83P51522 516 aa3.41□□□□□ -1.86
GPNMB-210ENST00000478451 CCL11P51671 97 aa3.41□□□□□ -1.86
GPNMB-210ENST00000478451 HNRNPA3P51991 378 aaKnown RBP3.41□□□□□ -1.86
GPNMB-210ENST00000478451 RPL8P62917 257 aaKnown RBP3.41□□□□□ -1.86
GPNMB-210ENST00000478451 VMA21Q3ZAQ7 101 aa3.41□□□□□ -1.86
GPNMB-210ENST00000478451 SPATA45Q537H7 98 aa3.41□□□□□ -1.86
GPNMB-210ENST00000478451 CT45A1Q5HYN5 189 aa3.41□□□□□ -1.86
GPNMB-210ENST00000478451 C1orf185Q5T7R7 199 aa3.41□□□□□ -1.86
GPNMB-210ENST00000478451 TEX36Q5VZQ5 186 aa3.41□□□□□ -1.86
GPNMB-210ENST00000478451 ZNF833PQ6ZTB9 187 aa3.41□□□□□ -1.86
GPNMB-210ENST00000478451 VKORC1L1Q8N0U8 176 aa3.41□□□□□ -1.86
GPNMB-210ENST00000478451 ZNRF1Q8ND25 227 aa3.41□□□□□ -1.86
GPNMB-210ENST00000478451 ZNF439Q8NDP4 499 aa3.41□□□□□ -1.86
GPNMB-210ENST00000478451 OR4C13Q8NGP0 309 aa3.41□□□□□ -1.86
GPNMB-210ENST00000478451 CT45A3Q8NHU0 189 aa3.41□□□□□ -1.86
GPNMB-210ENST00000478451 TMEM167AQ8TBQ9 72 aa3.41□□□□□ -1.86
GPNMB-210ENST00000478451 ITLN1Q8WWA0 313 aa3.41□□□□□ -1.86
GPNMB-210ENST00000478451 TMEM186Q96B77 213 aa3.41□□□□□ -1.86
GPNMB-210ENST00000478451 FLYWCH2Q96CP2 140 aaKnown RBP3.41□□□□□ -1.86
GPNMB-210ENST00000478451 STARD4Q96DR4 205 aa3.41□□□□□ -1.86
GPNMB-210ENST00000478451 FMC1Q96HJ9 113 aa3.41□□□□□ -1.86
GPNMB-210ENST00000478451 IGF2BP2-AS1Q96M15 143 aa3.41□□□□□ -1.86
GPNMB-210ENST00000478451 TXN2Q99757 166 aa3.41□□□□□ -1.86
GPNMB-210ENST00000478451 DCTN5Q9BTE1 182 aa3.41□□□□□ -1.86
GPNMB-210ENST00000478451 PAXXQ9BUH6 204 aa3.41□□□□□ -1.86
GPNMB-210ENST00000478451 GNB4Q9HAV0 340 aa3.41□□□□□ -1.86
GPNMB-210ENST00000478451 DNAJC4Q9NNZ3 241 aa3.41□□□□□ -1.86
GPNMB-210ENST00000478451 NRN1Q9NPD7 142 aa3.41□□□□□ -1.86
GPNMB-210ENST00000478451 FZR1Q9UM11 496 aa3.41□□□□□ -1.86
GPNMB-210ENST00000478451 RNF24Q9Y225 148 aa3.41□□□□□ -1.86
GPNMB-210ENST00000478451 GOLT1BQ9Y3E0 138 aa3.41□□□□□ -1.86
GPNMB-210ENST00000478451 TBL2Q9Y4P3 447 aaKnown RBP3.41□□□□□ -1.86
GPNMB-210ENST00000478451 AMMECR1Q9Y4X0 333 aaPredicted RBP3.41□□□□□ -1.86
GPNMB-210ENST00000478451 R4GN57 208 aa3.41□□□□□ -1.86
GPNMB-210ENST00000478451 PCNX2A6NKB5 2137 aa3.41□□□□□ -1.86
GPNMB-210ENST00000478451 IGHV3OR15-7A0A075B7D8 119 aa3.4□□□□□ -1.87
GPNMB-210ENST00000478451 A0A1W2PNU3 283 aaPredicted RBP3.4□□□□□ -1.87
GPNMB-210ENST00000478451 FAM231BA6NCW3 169 aa3.4□□□□□ -1.87
GPNMB-210ENST00000478451 A8MWL6 223 aa3.4□□□□□ -1.87
GPNMB-210ENST00000478451 GGTLC3B5MD39 225 aa3.4□□□□□ -1.87
GPNMB-210ENST00000478451 HSBP1L1C9JCN9 74 aa3.4□□□□□ -1.87
GPNMB-210ENST00000478451 C16orf97H3BN30 126 aa3.4□□□□□ -1.87
GPNMB-210ENST00000478451 M0R296 226 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms