RNA–Protein interactions for RNA: ENST00000478282.1

U2AF1-210, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 3,344 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-210ENST00000478282 GATA4P43694 442 aa11.94□□□□□ -0.5
U2AF1-210ENST00000478282 SUB1P53999 127 aaKnown RBP eCLIP11.94□□□□□ -0.5
U2AF1-210ENST00000478282 SMIM15Q7Z3B0 74 aa11.94□□□□□ -0.5
U2AF1-210ENST00000478282 CADP27708 2225 aa11.94□□□□□ -0.5
U2AF1-210ENST00000478282 CHEK1O14757 476 aa11.94□□□□□ -0.5
U2AF1-210ENST00000478282 PSG9Q00887 426 aa11.94□□□□□ -0.5
U2AF1-210ENST00000478282 TMEM167AQ8TBQ9 72 aa11.94□□□□□ -0.5
U2AF1-210ENST00000478282 HSPB8Q9UJY1 196 aa11.94□□□□□ -0.5
U2AF1-210ENST00000478282 NBEAP1P0C6P0 100 aa11.94□□□□□ -0.5
U2AF1-210ENST00000478282 C10orf55Q5SWW7 151 aa11.94□□□□□ -0.5
U2AF1-210ENST00000478282 C5orf17Q8NAS9 161 aa11.94□□□□□ -0.5
U2AF1-210ENST00000478282 ORM2P19652 201 aa11.93□□□□□ -0.5
U2AF1-210ENST00000478282 VHLLQ6RSH7 139 aa11.93□□□□□ -0.5
U2AF1-210ENST00000478282 Q6ZS92 163 aa11.93□□□□□ -0.5
U2AF1-210ENST00000478282 ZCCHC24Q8N2G6 241 aaKnown RBP11.93□□□□□ -0.5
U2AF1-210ENST00000478282 DAZAP1Q96EP5 407 aaKnown RBP11.93□□□□□ -0.5
U2AF1-210ENST00000478282 MCRIP2Q9BUT9 160 aaKnown RBP11.93□□□□□ -0.5
U2AF1-210ENST00000478282 PROCRQ9UNN8 238 aa11.93□□□□□ -0.5
U2AF1-210ENST00000478282 A0A087X0K7 114 aa11.93□□□□□ -0.5
U2AF1-210ENST00000478282 FAM231BA6NCW3 169 aa11.93□□□□□ -0.5
U2AF1-210ENST00000478282 ZNF788Q6ZQV5 615 aa11.93□□□□□ -0.5
U2AF1-210ENST00000478282 OR5AN1Q8NGI8 311 aa11.93□□□□□ -0.5
U2AF1-210ENST00000478282 OR1B1Q8NGR6 318 aa11.93□□□□□ -0.5
U2AF1-210ENST00000478282 FLYWCH2Q96CP2 140 aaKnown RBP11.93□□□□□ -0.5
U2AF1-210ENST00000478282 ZNF138P52744 262 aa11.93□□□□□ -0.5
U2AF1-210ENST00000478282 OR4A5Q8NH83 315 aa11.93□□□□□ -0.5
U2AF1-210ENST00000478282 ARFGEF3Q5TH69 2177 aa11.92□□□□□ -0.5
U2AF1-210ENST00000478282 M0R1B8 84 aa11.92□□□□□ -0.5
U2AF1-210ENST00000478282 GLRXP35754 106 aa11.92□□□□□ -0.5
U2AF1-210ENST00000478282 LINC01545Q5VT33 79 aa11.92□□□□□ -0.5
U2AF1-210ENST00000478282 hADV38S2A0JD32 116 aa11.92□□□□□ -0.5
U2AF1-210ENST00000478282 NPIPB6E9PJ23 425 aa11.92□□□□□ -0.5
U2AF1-210ENST00000478282 H0Y8G0 127 aa11.92□□□□□ -0.5
U2AF1-210ENST00000478282 TCRAP04437 139 aa11.92□□□□□ -0.5
U2AF1-210ENST00000478282 GPR183P32249 361 aa11.92□□□□□ -0.5
U2AF1-210ENST00000478282 VSTM2AQ8TAG5 236 aa11.92□□□□□ -0.5
U2AF1-210ENST00000478282 TMUB1Q9BVT8 246 aa11.92□□□□□ -0.5
U2AF1-210ENST00000478282 TRAV8-6A0A0B4J262 113 aa11.91□□□□□ -0.5
U2AF1-210ENST00000478282 TRAV17A0A0B4J275 112 aa11.91□□□□□ -0.5
U2AF1-210ENST00000478282 C22orf46C9J442 243 aa11.91□□□□□ -0.5
U2AF1-210ENST00000478282 PEF1Q9UBV8 284 aaKnown RBP11.91□□□□□ -0.5
U2AF1-210ENST00000478282 LINC00312Q9Y6C7 94 aa11.91□□□□□ -0.5
U2AF1-210ENST00000478282 PRRC2CQ9Y520 2896 aaKnown RBP11.91□□□□□ -0.5
U2AF1-210ENST00000478282 IGLV3-9A0A075B6K5 115 aa11.91□□□□□ -0.5
U2AF1-210ENST00000478282 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.91□□□□□ -0.5
U2AF1-210ENST00000478282 HAX1O00165 279 aa11.91□□□□□ -0.5
U2AF1-210ENST00000478282 FAM71F2Q6NXP2 309 aa11.91□□□□□ -0.5
U2AF1-210ENST00000478282 LHFPL4Q7Z7J7 247 aa11.91□□□□□ -0.5
U2AF1-210ENST00000478282 PRORYQ9H606 182 aa11.91□□□□□ -0.5
U2AF1-210ENST00000478282 K7EM74 188 aa11.91□□□□□ -0.5
U2AF1-210ENST00000478282 APOHP02749 345 aaPredicted RBP11.91□□□□□ -0.5
U2AF1-210ENST00000478282 COX8AP10176 69 aa11.91□□□□□ -0.5
U2AF1-210ENST00000478282 GP9P14770 177 aa11.91□□□□□ -0.5
U2AF1-210ENST00000478282 TNFAIP6P98066 277 aaPredicted RBP11.91□□□□□ -0.5
U2AF1-210ENST00000478282 OR4C13Q8NGP0 309 aa11.91□□□□□ -0.5
U2AF1-210ENST00000478282 Q9H3A6 140 aa11.91□□□□□ -0.5
U2AF1-210ENST00000478282 APC2O95996 2303 aa11.91□□□□□ -0.5
U2AF1-210ENST00000478282 ARF6P62330 175 aa11.9□□□□□ -0.5
U2AF1-210ENST00000478282 C2orf91Q6ZV80 131 aa11.9□□□□□ -0.5
U2AF1-210ENST00000478282 SARAFQ96BY9 339 aa11.9□□□□□ -0.5
U2AF1-210ENST00000478282 PMCHL2Q9BQD1 86 aa11.9□□□□□ -0.5
U2AF1-210ENST00000478282 GAGE12BA1L429 117 aa11.9□□□□□ -0.5
U2AF1-210ENST00000478282 COL8A1P27658 744 aa11.89□□□□□ -0.51
U2AF1-210ENST00000478282 RUSC1-AS1Q66K80 236 aa11.89□□□□□ -0.51
U2AF1-210ENST00000478282 Q86TA4 180 aa11.89□□□□□ -0.51
U2AF1-210ENST00000478282 ZADH2Q8N4Q0 377 aa11.89□□□□□ -0.51
U2AF1-210ENST00000478282 NEU4Q8WWR8 484 aaPredicted RBP11.89□□□□□ -0.51
U2AF1-210ENST00000478282 H3BTX0 84 aa11.89□□□□□ -0.51
U2AF1-210ENST00000478282 K7ERU9 68 aa11.89□□□□□ -0.51
U2AF1-210ENST00000478282 CSN3P07498 182 aa11.89□□□□□ -0.51
U2AF1-210ENST00000478282 HTR1DP28221 377 aa11.89□□□□□ -0.51
U2AF1-210ENST00000478282 TRGV9Q99603 122 aa11.89□□□□□ -0.51
U2AF1-210ENST00000478282 DSPP15924 2871 aaKnown RBP11.89□□□□□ -0.51
U2AF1-210ENST00000478282 A0A1W2PPI3 338 aa11.89□□□□□ -0.51
U2AF1-210ENST00000478282 IGHV1-46P01743 117 aa11.89□□□□□ -0.51
U2AF1-210ENST00000478282 CRYGCP07315 174 aa11.89□□□□□ -0.51
U2AF1-210ENST00000478282 OR10X1Q8NGY0 326 aa11.89□□□□□ -0.51
U2AF1-210ENST00000478282 MGAQ8IWI9 3026 aa11.89□□□□□ -0.51
U2AF1-210ENST00000478282 ANKRD11Q6UB99 2663 aaPredicted RBP11.89□□□□□ -0.51
U2AF1-210ENST00000478282 IGLV2-23P01705 113 aa11.88□□□□□ -0.51
U2AF1-210ENST00000478282 BPIFA4PQ86YQ2 179 aa11.88□□□□□ -0.51
U2AF1-210ENST00000478282 TIMM8BQ9Y5J9 83 aaPredicted RBP11.88□□□□□ -0.51
U2AF1-210ENST00000478282 ICE1Q9Y2F5 2266 aa11.88□□□□□ -0.51
U2AF1-210ENST00000478282 C7orf71A4D174 169 aa11.88□□□□□ -0.51
U2AF1-210ENST00000478282 FAM87AP0C7U9 286 aa11.88□□□□□ -0.51
U2AF1-210ENST00000478282 IGLC1P0CG04 106 aa11.88□□□□□ -0.51
U2AF1-210ENST00000478282 ABHD17AQ96GS6 310 aa11.88□□□□□ -0.51
U2AF1-210ENST00000478282 OVOL3O00110 214 aa11.88□□□□□ -0.51
U2AF1-210ENST00000478282 SEC11AP67812 179 aa11.88□□□□□ -0.51
U2AF1-210ENST00000478282 C16orf54Q6UWD8 224 aa11.88□□□□□ -0.51
U2AF1-210ENST00000478282 CIARTQ8N365 385 aaPredicted RBP11.88□□□□□ -0.51
U2AF1-210ENST00000478282 ZNF747Q9BV97 191 aa11.88□□□□□ -0.51
U2AF1-210ENST00000478282 AP5S1Q9NUS5 200 aa11.88□□□□□ -0.51
U2AF1-210ENST00000478282 SPTBN2O15020 2390 aa11.87□□□□□ -0.51
U2AF1-210ENST00000478282 FOXE3Q13461 319 aa11.87□□□□□ -0.51
U2AF1-210ENST00000478282 TEX36Q5VZQ5 186 aa11.87□□□□□ -0.51
U2AF1-210ENST00000478282 CSTL1Q9H114 145 aa11.87□□□□□ -0.51
U2AF1-210ENST00000478282 ATMQ13315 3056 aa11.87□□□□□ -0.51
U2AF1-210ENST00000478282 TRAV8-1A0A0A6YYK1 113 aa11.87□□□□□ -0.51
U2AF1-210ENST00000478282 CCL3L1P16619 93 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms