RNA–Protein interactions for RNA: ENST00000478021.1

TRAF4-211, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-211ENST00000478021 TP53TG1Q9Y2A0 90 aa16.72■□□□□ 0.27
TRAF4-211ENST00000478021 GSG1LQ6UXU4 331 aa16.71■□□□□ 0.27
TRAF4-211ENST00000478021 NRARPQ7Z6K4 114 aa16.71■□□□□ 0.27
TRAF4-211ENST00000478021 OR10P1Q8NGE3 313 aa16.71■□□□□ 0.27
TRAF4-211ENST00000478021 ORM2P19652 201 aa16.7■□□□□ 0.26
TRAF4-211ENST00000478021 S100A10P60903 97 aa16.7■□□□□ 0.26
TRAF4-211ENST00000478021 ARL16Q0P5N6 197 aa16.7■□□□□ 0.26
TRAF4-211ENST00000478021 CYP2G1PQ6ZSU1 146 aa16.7■□□□□ 0.26
TRAF4-211ENST00000478021 MGAT4CQ9UBM8 478 aa16.7■□□□□ 0.26
TRAF4-211ENST00000478021 CFDP00746 253 aaPredicted RBP16.69■□□□□ 0.26
TRAF4-211ENST00000478021 CA1P00915 261 aaPredicted RBP16.69■□□□□ 0.26
TRAF4-211ENST00000478021 BCAP31P51572 246 aa16.69■□□□□ 0.26
TRAF4-211ENST00000478021 ACTL10Q5JWF8 245 aa16.69■□□□□ 0.26
TRAF4-211ENST00000478021 OR1B1Q8NGR6 318 aa16.69■□□□□ 0.26
TRAF4-211ENST00000478021 GPN1Q9HCN4 374 aaPredicted RBP16.69■□□□□ 0.26
TRAF4-211ENST00000478021 DOK5Q9P104 306 aa16.69■□□□□ 0.26
TRAF4-211ENST00000478021 FBXL17Q9UF56 701 aa16.69■□□□□ 0.26
TRAF4-211ENST00000478021 C1orf194Q5T5A4 169 aa16.68■□□□□ 0.26
TRAF4-211ENST00000478021 TRPT1Q86TN4 253 aaKnown RBP16.68■□□□□ 0.26
TRAF4-211ENST00000478021 OR8I2Q8N0Y5 310 aa16.68■□□□□ 0.26
TRAF4-211ENST00000478021 SLC25A22Q9H936 323 aa16.68■□□□□ 0.26
TRAF4-211ENST00000478021 NPVFQ9HCQ7 196 aa16.68■□□□□ 0.26
TRAF4-211ENST00000478021 A0A0J9YWU9 116 aa16.67■□□□□ 0.26
TRAF4-211ENST00000478021 INMT-MINDY4F8WBC2 141 aa16.67■□□□□ 0.26
TRAF4-211ENST00000478021 CAV2P51636 162 aa16.67■□□□□ 0.26
TRAF4-211ENST00000478021 SNRPD3P62318 126 aaKnown RBP16.67■□□□□ 0.26
TRAF4-211ENST00000478021 RAB32Q13637 225 aa16.67■□□□□ 0.26
TRAF4-211ENST00000478021 TMEM147Q9BVK8 224 aa16.67■□□□□ 0.26
TRAF4-211ENST00000478021 C11orf1Q9H5F2 150 aa16.67■□□□□ 0.26
TRAF4-211ENST00000478021 FAM24AA6NFZ4 105 aa16.66■□□□□ 0.26
TRAF4-211ENST00000478021 SIX6O95475 246 aa16.66■□□□□ 0.26
TRAF4-211ENST00000478021 SLC38A11Q08AI6 406 aa16.66■□□□□ 0.26
TRAF4-211ENST00000478021 SLC25A32Q9H2D1 315 aa16.66■□□□□ 0.26
TRAF4-211ENST00000478021 STARD9Q9P2P6 4700 aa16.66■□□□□ 0.26
TRAF4-211ENST00000478021 ZNF98A6NK75 572 aa16.65■□□□□ 0.26
TRAF4-211ENST00000478021 FNDC10F2Z333 226 aa16.65■□□□□ 0.26
TRAF4-211ENST00000478021 GOSR2O14653 212 aa16.65■□□□□ 0.26
TRAF4-211ENST00000478021 LINC00869P0C866 280 aa16.65■□□□□ 0.26
TRAF4-211ENST00000478021 DEFA1P59665 94 aa16.65■□□□□ 0.26
TRAF4-211ENST00000478021 DEFA3P59666 94 aa16.65■□□□□ 0.26
TRAF4-211ENST00000478021 IL15RAQ13261 267 aa16.65■□□□□ 0.26
TRAF4-211ENST00000478021 SLC45A2Q9UMX9 530 aa16.65■□□□□ 0.26
TRAF4-211ENST00000478021 CST7O76096 145 aa16.64■□□□□ 0.25
TRAF4-211ENST00000478021 PVALBP20472 110 aaPredicted RBP16.64■□□□□ 0.25
TRAF4-211ENST00000478021 DEFB1P60022 68 aa16.64■□□□□ 0.25
TRAF4-211ENST00000478021 EWSR1Q01844 656 aaKnown RBP eCLIP16.64■□□□□ 0.252e-6■■■■□ 23.3
TRAF4-211ENST00000478021 TEPPQ6URK8 271 aa16.64■□□□□ 0.25
TRAF4-211ENST00000478021 LINC00052Q96N35 136 aa16.64■□□□□ 0.25
TRAF4-211ENST00000478021 SCRT1Q9BWW7 348 aa16.64■□□□□ 0.25
TRAF4-211ENST00000478021 SEPSECSQ9HD40 501 aaKnown RBP16.64■□□□□ 0.25
TRAF4-211ENST00000478021 PRAF2O60831 178 aa16.63■□□□□ 0.25
TRAF4-211ENST00000478021 DEDDO75618 318 aa16.63■□□□□ 0.25
TRAF4-211ENST00000478021 OR5G3P0C626 314 aa16.63■□□□□ 0.25
TRAF4-211ENST00000478021 C4BPBP20851 252 aa16.63■□□□□ 0.25
TRAF4-211ENST00000478021 SELENOTP62341 195 aa16.63■□□□□ 0.25
TRAF4-211ENST00000478021 TMEM217Q8N7C4 229 aa16.63■□□□□ 0.25
TRAF4-211ENST00000478021 IL17DQ8TAD2 202 aa16.63■□□□□ 0.25
TRAF4-211ENST00000478021 GATAD1Q8WUU5 269 aa16.63■□□□□ 0.25
TRAF4-211ENST00000478021 RARRES2Q99969 163 aa16.63■□□□□ 0.25
TRAF4-211ENST00000478021 CSMD3Q7Z407 3707 aa16.62■□□□□ 0.25
TRAF4-211ENST00000478021 H3BRN7 92 aa16.62■□□□□ 0.25
TRAF4-211ENST00000478021 SOCS3O14543 225 aa16.62■□□□□ 0.25
TRAF4-211ENST00000478021 GALR1P47211 349 aa16.62■□□□□ 0.25
TRAF4-211ENST00000478021 RAP2BP61225 183 aa16.62■□□□□ 0.25
TRAF4-211ENST00000478021 OR11H2Q8NH07 326 aa16.62■□□□□ 0.25
TRAF4-211ENST00000478021 MARVELD1Q9BSK0 173 aa16.62■□□□□ 0.25
TRAF4-211ENST00000478021 GGACTQ9BVM4 153 aa16.62■□□□□ 0.25
TRAF4-211ENST00000478021 SLC25A39Q9BZJ4 359 aaPredicted RBP16.62■□□□□ 0.25
TRAF4-211ENST00000478021 HIGD1AQ9Y241 93 aa16.62■□□□□ 0.25
TRAF4-211ENST00000478021 IGSF23A1L1A6 192 aa16.61■□□□□ 0.25
TRAF4-211ENST00000478021 HYPMO75409 117 aa16.61■□□□□ 0.25
TRAF4-211ENST00000478021 GIG44P09565 113 aaPredicted RBP16.61■□□□□ 0.25
TRAF4-211ENST00000478021 SPP1P10451 314 aa16.61■□□□□ 0.25
TRAF4-211ENST00000478021 ID1P41134 155 aa16.61■□□□□ 0.25
TRAF4-211ENST00000478021 MORN3Q6PF18 240 aaPredicted RBP16.61■□□□□ 0.25
TRAF4-211ENST00000478021 UHRF2Q96PU4 802 aa16.61■□□□□ 0.25
TRAF4-211ENST00000478021 RSG1Q9BU20 258 aa16.61■□□□□ 0.25
TRAF4-211ENST00000478021 ARL6Q9H0F7 186 aa16.61■□□□□ 0.25
TRAF4-211ENST00000478021 LYRM2Q9NU23 88 aaPredicted RBP16.61■□□□□ 0.25
TRAF4-211ENST00000478021 AGPAT2O15120 278 aa16.6■□□□□ 0.25
TRAF4-211ENST00000478021 PSMB3P49720 205 aa16.6■□□□□ 0.25
TRAF4-211ENST00000478021 PLP1P60201 277 aa16.6■□□□□ 0.25
TRAF4-211ENST00000478021 GDF5OSQ5U4N7 250 aa16.6■□□□□ 0.25
TRAF4-211ENST00000478021 C17orf77Q96MU5 243 aa16.6■□□□□ 0.25
TRAF4-211ENST00000478021 MGST2Q99735 147 aa16.6■□□□□ 0.25
TRAF4-211ENST00000478021 SHANK2-AS3Q9BTD1 123 aa16.6■□□□□ 0.25
TRAF4-211ENST00000478021 H3BMM0 161 aa16.59■□□□□ 0.25
TRAF4-211ENST00000478021 S100A7P31151 101 aa16.59■□□□□ 0.25
TRAF4-211ENST00000478021 PMS2P11Q13670 270 aa16.59■□□□□ 0.25
TRAF4-211ENST00000478021 ZNF546Q86UE3 836 aa16.59■□□□□ 0.25
TRAF4-211ENST00000478021 TMEM252Q8N6L7 170 aa16.59■□□□□ 0.25
TRAF4-211ENST00000478021 CLEC5AQ9NY25 188 aa16.59■□□□□ 0.25
TRAF4-211ENST00000478021 IGKV3-20P01619 116 aa16.58■□□□□ 0.24
TRAF4-211ENST00000478021 SULT1A1P50225 295 aa16.58■□□□□ 0.24
TRAF4-211ENST00000478021 LRRC37A5PQ49AS3 106 aa16.58■□□□□ 0.24
TRAF4-211ENST00000478021 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.58■□□□□ 0.24
TRAF4-211ENST00000478021 PATE2Q6UY27 113 aa16.58■□□□□ 0.24
TRAF4-211ENST00000478021 C16orf92Q96LL3 132 aa16.58■□□□□ 0.24
TRAF4-211ENST00000478021 GPR82Q96P67 336 aa16.58■□□□□ 0.24
TRAF4-211ENST00000478021 DYNC2H1Q8NCM8 4307 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms