RNA–Protein interactions for RNA: ENST00000477949.1

USP33-208, Transcript of ubiquitin specific peptidase 33, human

TSL 2

Gene USP33, Length 663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP33-208	ENST00000477949	KRTAP9-6	A8MVA2	160 aa		4.2	□□□□□ -1.74
USP33-208	ENST00000477949	INS	P01308	110 aa		4.2	□□□□□ -1.74
USP33-208	ENST00000477949	IGLC1	P0CG04	106 aa		4.2	□□□□□ -1.74
USP33-208	ENST00000477949	G6PC	P35575	357 aa		4.2	□□□□□ -1.74
USP33-208	ENST00000477949	PRCD	Q00LT1	54 aa		4.2	□□□□□ -1.74
USP33-208	ENST00000477949	ARL6IP1	Q15041	203 aa		4.2	□□□□□ -1.74
USP33-208	ENST00000477949	RAB11B	Q15907	218 aa		4.2	□□□□□ -1.74
USP33-208	ENST00000477949	SPINK13	Q1W4C9	94 aa		4.2	□□□□□ -1.74
USP33-208	ENST00000477949	ZNF818P	Q6ZRF7	136 aa		4.2	□□□□□ -1.74
USP33-208	ENST00000477949	C10orf67	Q8IYJ2	551 aa		4.2	□□□□□ -1.74
USP33-208	ENST00000477949	OR11H7	Q8NGC8	314 aa		4.2	□□□□□ -1.74
USP33-208	ENST00000477949	OR10J6P	Q8NGY7	276 aa		4.2	□□□□□ -1.74
USP33-208	ENST00000477949	OR4X1	Q8NH49	305 aa		4.2	□□□□□ -1.74
USP33-208	ENST00000477949	OR51H1	Q8NH63	302 aa		4.2	□□□□□ -1.74
USP33-208	ENST00000477949	LGALS14	Q8TCE9	139 aa		4.2	□□□□□ -1.74
USP33-208	ENST00000477949	SECTM1	Q8WVN6	248 aa		4.2	□□□□□ -1.74
USP33-208	ENST00000477949	NARS2	Q96I59	477 aa	Known RBP	4.2	□□□□□ -1.74
USP33-208	ENST00000477949	DOK5	Q9P104	306 aa		4.2	□□□□□ -1.74
USP33-208	ENST00000477949		A0A075B6Q4	140 aa		4.19	□□□□□ -1.74
USP33-208	ENST00000477949	INS-IGF2	F8WCM5	200 aa		4.19	□□□□□ -1.74
USP33-208	ENST00000477949		K7EP13	123 aa		4.19	□□□□□ -1.74
USP33-208	ENST00000477949	SSX5	O60225	188 aa		4.19	□□□□□ -1.74
USP33-208	ENST00000477949	KRAS	P01116	189 aa		4.19	□□□□□ -1.74
USP33-208	ENST00000477949	RNASE2	P10153	161 aa	Known RBP	4.19	□□□□□ -1.74
USP33-208	ENST00000477949	PTHLH	P12272	177 aa		4.19	□□□□□ -1.74
USP33-208	ENST00000477949	RPL37A	P61513	92 aa	Known RBP	4.19	□□□□□ -1.74
USP33-208	ENST00000477949	B2M	P61769	119 aa		4.19	□□□□□ -1.74
USP33-208	ENST00000477949	CATR1	Q13166	79 aa		4.19	□□□□□ -1.74
USP33-208	ENST00000477949	LINC01620	Q4KN68	170 aa		4.19	□□□□□ -1.74
USP33-208	ENST00000477949	HSD17B12	Q53GQ0	312 aa		4.19	□□□□□ -1.74
USP33-208	ENST00000477949		Q6ZRU5	148 aa		4.19	□□□□□ -1.74
USP33-208	ENST00000477949	WFDC10B	Q8IUB3	73 aa		4.19	□□□□□ -1.74
USP33-208	ENST00000477949	ZNF555	Q8NEP9	628 aa		4.19	□□□□□ -1.74
USP33-208	ENST00000477949	OR6F1	Q8NGZ6	308 aa		4.19	□□□□□ -1.74
USP33-208	ENST00000477949	FCAMR	Q8WWV6	532 aa		4.19	□□□□□ -1.74
USP33-208	ENST00000477949	PYDC1	Q8WXC3	89 aa		4.19	□□□□□ -1.74
USP33-208	ENST00000477949	TMEM230	Q96A57	120 aa		4.19	□□□□□ -1.74
USP33-208	ENST00000477949	C16orf74	Q96GX8	76 aa		4.19	□□□□□ -1.74
USP33-208	ENST00000477949	LINC00052	Q96N35	136 aa		4.19	□□□□□ -1.74
USP33-208	ENST00000477949	PLGRKT	Q9HBL7	147 aa		4.19	□□□□□ -1.74
USP33-208	ENST00000477949	HEYL	Q9NQ87	328 aa	Predicted RBP	4.19	□□□□□ -1.74
USP33-208	ENST00000477949	ANXA10	Q9UJ72	324 aa		4.19	□□□□□ -1.74
USP33-208	ENST00000477949	AK6	Q9Y3D8	172 aa	Known RBP	4.19	□□□□□ -1.74
USP33-208	ENST00000477949	LY96	Q9Y6Y9	160 aa		4.19	□□□□□ -1.74
USP33-208	ENST00000477949	TRAV12-2	A0A075B6T6	113 aa		4.18	□□□□□ -1.74
USP33-208	ENST00000477949	ISLR	O14498	428 aa		4.18	□□□□□ -1.74
USP33-208	ENST00000477949	SNAPC5	O75971	98 aa		4.18	□□□□□ -1.74
USP33-208	ENST00000477949	PPY	P01298	95 aa		4.18	□□□□□ -1.74
USP33-208	ENST00000477949	IGLV2-11	P01706	119 aa		4.18	□□□□□ -1.74
USP33-208	ENST00000477949	PRSS2	P07478	247 aa		4.18	□□□□□ -1.74
USP33-208	ENST00000477949	GADD45A	P24522	165 aa		4.18	□□□□□ -1.74
USP33-208	ENST00000477949	F2R	P25116	425 aa		4.18	□□□□□ -1.74
USP33-208	ENST00000477949	CNN1	P51911	297 aa	Known RBP	4.18	□□□□□ -1.74
USP33-208	ENST00000477949	TAS2R60	P59551	318 aa		4.18	□□□□□ -1.74
USP33-208	ENST00000477949	YPEL3	P61236	119 aa	Predicted RBP	4.18	□□□□□ -1.74
USP33-208	ENST00000477949	ERVK-16	P61578	105 aa		4.18	□□□□□ -1.74
USP33-208	ENST00000477949	DHODH	Q02127	395 aa		4.18	□□□□□ -1.74
USP33-208	ENST00000477949	TRAM1	Q15629	374 aa		4.18	□□□□□ -1.74
USP33-208	ENST00000477949	BSX	Q3C1V8	233 aa		4.18	□□□□□ -1.74
USP33-208	ENST00000477949	KRTAP5-4	Q6L8H1	288 aa		4.18	□□□□□ -1.74
USP33-208	ENST00000477949	EBLN2	Q6P2I7	272 aa		4.18	□□□□□ -1.74
USP33-208	ENST00000477949	TMEM91	Q6ZNR0	172 aa		4.18	□□□□□ -1.74
USP33-208	ENST00000477949	LRTM2	Q8N967	370 aa		4.18	□□□□□ -1.74
USP33-208	ENST00000477949	TMEM263	Q8WUH6	116 aa	Known RBP	4.18	□□□□□ -1.74
USP33-208	ENST00000477949	SEC22A	Q96IW7	307 aa		4.18	□□□□□ -1.74
USP33-208	ENST00000477949	SLC5A7	Q9GZV3	580 aa		4.18	□□□□□ -1.74
USP33-208	ENST00000477949	FKBP14	Q9NWM8	211 aa		4.18	□□□□□ -1.74
USP33-208	ENST00000477949	FKBP11	Q9NYL4	201 aa		4.18	□□□□□ -1.74
USP33-208	ENST00000477949	KLK11	Q9UBX7	282 aa		4.18	□□□□□ -1.74
USP33-208	ENST00000477949	PSORS1C1	Q9UIG5	152 aa		4.18	□□□□□ -1.74
USP33-208	ENST00000477949		V9GY05	133 aa		4.18	□□□□□ -1.74
USP33-208	ENST00000477949	METTL21EP	A6NDL7	271 aa		4.17	□□□□□ -1.74
USP33-208	ENST00000477949	ARL6IP5	O75915	188 aa		4.17	□□□□□ -1.74
USP33-208	ENST00000477949	GAGE7	O76087	117 aa		4.17	□□□□□ -1.74
USP33-208	ENST00000477949	IGKV1-39	P01597	117 aa		4.17	□□□□□ -1.74
USP33-208	ENST00000477949	IGKV1D-39	P04432	117 aa		4.17	□□□□□ -1.74
USP33-208	ENST00000477949	IL4	P05112	153 aa		4.17	□□□□□ -1.74
USP33-208	ENST00000477949	GAGE12F	P0CL80	117 aa		4.17	□□□□□ -1.74
USP33-208	ENST00000477949	GAGE12G	P0CL81	117 aa		4.17	□□□□□ -1.74
USP33-208	ENST00000477949	GAGE12I	P0CL82	117 aa		4.17	□□□□□ -1.74
USP33-208	ENST00000477949	FCGR2C	P31995	323 aa		4.17	□□□□□ -1.74
USP33-208	ENST00000477949	TALDO1	P37837	337 aa		4.17	□□□□□ -1.74
USP33-208	ENST00000477949	ETV6	P41212	452 aa		4.17	□□□□□ -1.74
USP33-208	ENST00000477949	LPAR6	P43657	344 aa		4.17	□□□□□ -1.74
USP33-208	ENST00000477949	RPL5	P46777	297 aa	Known RBP	4.17	□□□□□ -1.74
USP33-208	ENST00000477949	HSPE1	P61604	102 aa	Known RBP	4.17	□□□□□ -1.74
USP33-208	ENST00000477949	SPHAR	Q15513	63 aa		4.17	□□□□□ -1.74
USP33-208	ENST00000477949	SPINK9	Q5DT21	86 aa		4.17	□□□□□ -1.74
USP33-208	ENST00000477949	AADACL3	Q5VUY0	350 aa		4.17	□□□□□ -1.74
USP33-208	ENST00000477949	HACD4	Q5VWC8	232 aa		4.17	□□□□□ -1.74
USP33-208	ENST00000477949	LAIR2	Q6ISS4	152 aa		4.17	□□□□□ -1.74
USP33-208	ENST00000477949	LYPD5	Q6UWN5	251 aa		4.17	□□□□□ -1.74
USP33-208	ENST00000477949	ZNF493	Q6ZR52	646 aa		4.17	□□□□□ -1.74
USP33-208	ENST00000477949	TPRA1	Q86W33	373 aa		4.17	□□□□□ -1.74
USP33-208	ENST00000477949	COQ8A	Q8NI60	647 aa		4.17	□□□□□ -1.74
USP33-208	ENST00000477949	CYGB	Q8WWM9	190 aa		4.17	□□□□□ -1.74
USP33-208	ENST00000477949	TSC22D3	Q99576	134 aa		4.17	□□□□□ -1.74
USP33-208	ENST00000477949	TRAV30	A0A087WSZ9	112 aa		4.16	□□□□□ -1.74
USP33-208	ENST00000477949	TRAV9-2	A0A087WT02	112 aa		4.16	□□□□□ -1.74
USP33-208	ENST00000477949	TMEM235	A6NFC5	223 aa		4.16	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms