RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 THTPAQ9BU02 230 aa2.78□□□□□ -1.96
VPS50-214ENST00000477935 OR51E2Q9H255 320 aa2.78□□□□□ -1.96
VPS50-214ENST00000477935 RIBC2Q9H4K1 309 aa2.78□□□□□ -1.96
VPS50-214ENST00000477935 VSIRQ9H7M9 311 aa2.78□□□□□ -1.96
VPS50-214ENST00000477935 KLK12Q9UKR0 248 aa2.78□□□□□ -1.96
VPS50-214ENST00000477935 GOLT1BQ9Y3E0 138 aa2.78□□□□□ -1.96
VPS50-214ENST00000477935 A0A0J9YXY3 114 aa2.77□□□□□ -1.97
VPS50-214ENST00000477935 A0A1W2PQL4 384 aaPredicted RBP2.77□□□□□ -1.97
VPS50-214ENST00000477935 KNCNA6PVL3 124 aa2.77□□□□□ -1.97
VPS50-214ENST00000477935 NUPL2O15504 423 aaKnown RBP2.77□□□□□ -1.97
VPS50-214ENST00000477935 DCTN3O75935 186 aa2.77□□□□□ -1.97
VPS50-214ENST00000477935 YIF1AO95070 293 aa2.77□□□□□ -1.97
VPS50-214ENST00000477935 ANXA8P13928 327 aa2.77□□□□□ -1.97
VPS50-214ENST00000477935 ZNF93P35789 620 aaPredicted RBP2.77□□□□□ -1.97
VPS50-214ENST00000477935 SERPINB10P48595 397 aa2.77□□□□□ -1.97
VPS50-214ENST00000477935 EIF2B2P49770 351 aaKnown RBP2.77□□□□□ -1.97
VPS50-214ENST00000477935 AP2S1P53680 142 aaPredicted RBP2.77□□□□□ -1.97
VPS50-214ENST00000477935 ARFRP1Q13795 201 aa2.77□□□□□ -1.97
VPS50-214ENST00000477935 TDRG1Q3Y452 100 aa2.77□□□□□ -1.97
VPS50-214ENST00000477935 IDO2Q6ZQW0 420 aa2.77□□□□□ -1.97
VPS50-214ENST00000477935 TMEM17Q86X19 198 aa2.77□□□□□ -1.97
VPS50-214ENST00000477935 OR10G2Q8NGC3 310 aa2.77□□□□□ -1.97
VPS50-214ENST00000477935 RXFP4Q8TDU9 374 aa2.77□□□□□ -1.97
VPS50-214ENST00000477935 RBPMSQ93062 196 aaKnown RBP2.77□□□□□ -1.97
VPS50-214ENST00000477935 GNPNAT1Q96EK6 184 aaPredicted RBP2.77□□□□□ -1.97
VPS50-214ENST00000477935 NIPSNAP1Q9BPW8 284 aa2.77□□□□□ -1.97
VPS50-214ENST00000477935 PRRG3Q9BZD7 231 aa2.77□□□□□ -1.97
VPS50-214ENST00000477935 DPH3P1Q9H4G8 78 aa2.77□□□□□ -1.97
VPS50-214ENST00000477935 REEP1Q9H902 201 aa2.77□□□□□ -1.97
VPS50-214ENST00000477935 EFCAB1Q9HAE3 211 aa2.77□□□□□ -1.97
VPS50-214ENST00000477935 TMEM138Q9NPI0 162 aa2.77□□□□□ -1.97
VPS50-214ENST00000477935 C21orf62Q9NYP8 219 aa2.77□□□□□ -1.97
VPS50-214ENST00000477935 TVP23BQ9NYZ1 205 aa2.77□□□□□ -1.97
VPS50-214ENST00000477935 RABAC1Q9UI14 185 aa2.77□□□□□ -1.97
VPS50-214ENST00000477935 GNG8Q9UK08 70 aa2.77□□□□□ -1.97
VPS50-214ENST00000477935 IGHV3OR16-8A0A075B7F1 116 aa2.76□□□□□ -1.97
VPS50-214ENST00000477935 OR4C45A6NMZ5 311 aa2.76□□□□□ -1.97
VPS50-214ENST00000477935 H3BMM0 161 aa2.76□□□□□ -1.97
VPS50-214ENST00000477935 PDCD6O75340 191 aa2.76□□□□□ -1.97
VPS50-214ENST00000477935 CRYZL1O95825 349 aa2.76□□□□□ -1.97
VPS50-214ENST00000477935 IGLV2-8P01709 118 aa2.76□□□□□ -1.97
VPS50-214ENST00000477935 CD2P06729 351 aa2.76□□□□□ -1.97
VPS50-214ENST00000477935 CTSGP08311 255 aa2.76□□□□□ -1.97
VPS50-214ENST00000477935 HTR1AP08908 422 aa2.76□□□□□ -1.97
VPS50-214ENST00000477935 ZNF688P0C7X2 276 aa2.76□□□□□ -1.97
VPS50-214ENST00000477935 SAA1P0DJI8 122 aaPredicted RBP2.76□□□□□ -1.97
VPS50-214ENST00000477935 DEFB130BP0DP73 79 aa2.76□□□□□ -1.97
VPS50-214ENST00000477935 DEFB130AP0DP74 79 aa2.76□□□□□ -1.97
VPS50-214ENST00000477935 M6PRP20645 277 aa2.76□□□□□ -1.97
VPS50-214ENST00000477935 PSME3P61289 254 aa2.76□□□□□ -1.97
VPS50-214ENST00000477935 B2MP61769 119 aa2.76□□□□□ -1.97
VPS50-214ENST00000477935 SNRPD3P62318 126 aaKnown RBP2.76□□□□□ -1.97
VPS50-214ENST00000477935 VSNL1P62760 191 aa2.76□□□□□ -1.97
VPS50-214ENST00000477935 TMED1Q13445 227 aa2.76□□□□□ -1.97
VPS50-214ENST00000477935 RBM48Q5RL73 367 aaKnown RBP2.76□□□□□ -1.97
VPS50-214ENST00000477935 C10orf55Q5SWW7 151 aa2.76□□□□□ -1.97
VPS50-214ENST00000477935 TTC23Q5W5X9 447 aa2.76□□□□□ -1.97
VPS50-214ENST00000477935 ZNF880Q6PDB4 577 aa2.76□□□□□ -1.97
VPS50-214ENST00000477935 SSX6Q7RTT6 188 aa2.76□□□□□ -1.97
VPS50-214ENST00000477935 GID4Q8IVV7 300 aa2.76□□□□□ -1.97
VPS50-214ENST00000477935 FAM24BQ8N5W8 94 aa2.76□□□□□ -1.97
VPS50-214ENST00000477935 HSD17B11Q8NBQ5 300 aa2.76□□□□□ -1.97
VPS50-214ENST00000477935 OR51A4Q8NGJ6 313 aa2.76□□□□□ -1.97
VPS50-214ENST00000477935 C7orf50Q9BRJ6 194 aaKnown RBP2.76□□□□□ -1.97
VPS50-214ENST00000477935 DCUN1D5Q9BTE7 237 aa2.76□□□□□ -1.97
VPS50-214ENST00000477935 CHAC1Q9BUX1 264 aa2.76□□□□□ -1.97
VPS50-214ENST00000477935 WARS2Q9UGM6 360 aaKnown RBP2.76□□□□□ -1.97
VPS50-214ENST00000477935 RAB26Q9ULW5 256 aa2.76□□□□□ -1.97
VPS50-214ENST00000477935 LPAP08519 4548 aa2.76□□□□□ -1.97
VPS50-214ENST00000477935 IGHV3OR16-13A0A075B7E8 117 aa2.75□□□□□ -1.97
VPS50-214ENST00000477935 IGHV3-49A0A0A0MS15 119 aa2.75□□□□□ -1.97
VPS50-214ENST00000477935 TRBV6-6A0A0A6YYG2 114 aa2.75□□□□□ -1.97
VPS50-214ENST00000477935 IGHV3-74A0A0B4J1X5 117 aa2.75□□□□□ -1.97
VPS50-214ENST00000477935 A0A0G2JND7 137 aa2.75□□□□□ -1.97
VPS50-214ENST00000477935 A0A0G2JRQ6 117 aa2.75□□□□□ -1.97
VPS50-214ENST00000477935 A0A1B0GWB2 263 aa2.75□□□□□ -1.97
VPS50-214ENST00000477935 TMEM212A6NML5 194 aa2.75□□□□□ -1.97
VPS50-214ENST00000477935 E7EUB6 86 aa2.75□□□□□ -1.97
VPS50-214ENST00000477935 PSCAO43653 123 aa2.75□□□□□ -1.97
VPS50-214ENST00000477935 FAM107AO95990 144 aa2.75□□□□□ -1.97
VPS50-214ENST00000477935 NAPSAO96009 420 aa2.75□□□□□ -1.97
VPS50-214ENST00000477935 TSPOP30536 169 aa2.75□□□□□ -1.97
VPS50-214ENST00000477935 RPL37AP61513 92 aaKnown RBP2.75□□□□□ -1.97
VPS50-214ENST00000477935 PPP3R1P63098 170 aa2.75□□□□□ -1.97
VPS50-214ENST00000477935 MRPL28Q13084 256 aaKnown RBP2.75□□□□□ -1.97
VPS50-214ENST00000477935 RCN1Q15293 331 aa2.75□□□□□ -1.97
VPS50-214ENST00000477935 Q56UQ5 140 aa2.75□□□□□ -1.97
VPS50-214ENST00000477935 AADACL4Q5VUY2 407 aa2.75□□□□□ -1.97
VPS50-214ENST00000477935 THOC7Q6I9Y2 204 aaKnown RBP2.75□□□□□ -1.97
VPS50-214ENST00000477935 OR2T5Q6IEZ7 315 aa2.75□□□□□ -1.97
VPS50-214ENST00000477935 SLC25A24Q6NUK1 477 aa2.75□□□□□ -1.97
VPS50-214ENST00000477935 C19orf35Q6ZS72 473 aa2.75□□□□□ -1.97
VPS50-214ENST00000477935 SCXQ7RTU7 201 aa2.75□□□□□ -1.97
VPS50-214ENST00000477935 TPRA1Q86W33 373 aa2.75□□□□□ -1.97
VPS50-214ENST00000477935 CDH26Q8IXH8 852 aa2.75□□□□□ -1.97
VPS50-214ENST00000477935 CMTM1Q8IZ96 169 aa2.75□□□□□ -1.97
VPS50-214ENST00000477935 Q8N814 137 aa2.75□□□□□ -1.97
VPS50-214ENST00000477935 C20orf203Q8NBC4 194 aa2.75□□□□□ -1.97
VPS50-214ENST00000477935 STXBP6Q8NFX7 210 aa2.75□□□□□ -1.97
VPS50-214ENST00000477935 OR4C16Q8NGL9 310 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms