RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 BAP18Q8IXM2 172 aa4.89□□□□□ -1.63
SPTLC1-205ENST00000477888 Q8N814 137 aa4.89□□□□□ -1.63
SPTLC1-205ENST00000477888 TSPAN14Q8NG11 270 aa4.89□□□□□ -1.63
SPTLC1-205ENST00000477888 OR1S2Q8NGQ3 325 aa4.89□□□□□ -1.63
SPTLC1-205ENST00000477888 RNASE8Q8TDE3 154 aaKnown RBP4.89□□□□□ -1.63
SPTLC1-205ENST00000477888 LINC01587Q99440 93 aa4.89□□□□□ -1.63
SPTLC1-205ENST00000477888 MND1Q9BWT6 205 aa4.89□□□□□ -1.63
SPTLC1-205ENST00000477888 PLCXD1Q9NUJ7 323 aa4.89□□□□□ -1.63
SPTLC1-205ENST00000477888 FKBP14Q9NWM8 211 aa4.89□□□□□ -1.63
SPTLC1-205ENST00000477888 TRAV12-2A0A075B6T6 113 aa4.88□□□□□ -1.63
SPTLC1-205ENST00000477888 ADAP1O75689 374 aa4.88□□□□□ -1.63
SPTLC1-205ENST00000477888 GAS8-AS1O95177 125 aa4.88□□□□□ -1.63
SPTLC1-205ENST00000477888 HTN1P15515 57 aa4.88□□□□□ -1.63
SPTLC1-205ENST00000477888 UCP1P25874 307 aa4.88□□□□□ -1.63
SPTLC1-205ENST00000477888 OR10J1P30954 320 aa4.88□□□□□ -1.63
SPTLC1-205ENST00000477888 ETV6P41212 452 aa4.88□□□□□ -1.63
SPTLC1-205ENST00000477888 HSPA13P48723 471 aa4.88□□□□□ -1.63
SPTLC1-205ENST00000477888 CNN1P51911 297 aaKnown RBP4.88□□□□□ -1.63
SPTLC1-205ENST00000477888 HNRNPA3P51991 378 aaKnown RBP4.88□□□□□ -1.63
SPTLC1-205ENST00000477888 FABP5Q01469 135 aa4.88□□□□□ -1.63
SPTLC1-205ENST00000477888 BSXQ3C1V8 233 aa4.88□□□□□ -1.63
SPTLC1-205ENST00000477888 DHRS11Q6UWP2 260 aa4.88□□□□□ -1.63
SPTLC1-205ENST00000477888 H2BFWTQ7Z2G1 175 aa4.88□□□□□ -1.63
SPTLC1-205ENST00000477888 TMEM144Q7Z5S9 345 aa4.88□□□□□ -1.63
SPTLC1-205ENST00000477888 TMEM256Q8N2U0 113 aa4.88□□□□□ -1.63
SPTLC1-205ENST00000477888 CYGBQ8WWM9 190 aa4.88□□□□□ -1.63
SPTLC1-205ENST00000477888 BORCS5Q969J3 196 aa4.88□□□□□ -1.63
SPTLC1-205ENST00000477888 RPRMQ9NS64 109 aa4.88□□□□□ -1.63
SPTLC1-205ENST00000477888 FAM212BQ9NTI7 297 aaPredicted RBP4.88□□□□□ -1.63
SPTLC1-205ENST00000477888 LY96Q9Y6Y9 160 aa4.88□□□□□ -1.63
SPTLC1-205ENST00000477888 A0A0B4J293 547 aa4.87□□□□□ -1.63
SPTLC1-205ENST00000477888 GAGE12BA1L429 117 aa4.87□□□□□ -1.63
SPTLC1-205ENST00000477888 F5H697 171 aa4.87□□□□□ -1.63
SPTLC1-205ENST00000477888 RS1O15537 224 aa4.87□□□□□ -1.63
SPTLC1-205ENST00000477888 GAGE7O76087 117 aa4.87□□□□□ -1.63
SPTLC1-205ENST00000477888 NXPH3O95157 252 aa4.87□□□□□ -1.63
SPTLC1-205ENST00000477888 TOMM40O96008 361 aa4.87□□□□□ -1.63
SPTLC1-205ENST00000477888 GAGE12FP0CL80 117 aa4.87□□□□□ -1.63
SPTLC1-205ENST00000477888 GAGE12GP0CL81 117 aa4.87□□□□□ -1.63
SPTLC1-205ENST00000477888 GAGE12IP0CL82 117 aa4.87□□□□□ -1.63
SPTLC1-205ENST00000477888 RD3LP0DJH9 198 aa4.87□□□□□ -1.63
SPTLC1-205ENST00000477888 RND2P52198 227 aa4.87□□□□□ -1.63
SPTLC1-205ENST00000477888 TRAM1Q15629 374 aa4.87□□□□□ -1.63
SPTLC1-205ENST00000477888 IZUMO4Q1ZYL8 232 aa4.87□□□□□ -1.63
SPTLC1-205ENST00000477888 C1orf194Q5T5A4 169 aa4.87□□□□□ -1.63
SPTLC1-205ENST00000477888 LYPD5Q6UWN5 251 aa4.87□□□□□ -1.63
SPTLC1-205ENST00000477888 OR5AP2Q8NGF4 316 aa4.87□□□□□ -1.63
SPTLC1-205ENST00000477888 OR51G1Q8NGK1 321 aa4.87□□□□□ -1.63
SPTLC1-205ENST00000477888 TMEM263Q8WUH6 116 aaKnown RBP4.87□□□□□ -1.63
SPTLC1-205ENST00000477888 UFD1Q92890 307 aa4.87□□□□□ -1.63
SPTLC1-205ENST00000477888 DAZAP1Q96EP5 407 aaKnown RBP4.87□□□□□ -1.63
SPTLC1-205ENST00000477888 CCDC90BQ9GZT6 254 aa4.87□□□□□ -1.63
SPTLC1-205ENST00000477888 TRAV1-2A0A0B4J238 106 aa4.86□□□□□ -1.63
SPTLC1-205ENST00000477888 ZNF98A6NK75 572 aa4.86□□□□□ -1.63
SPTLC1-205ENST00000477888 CASQ2O14958 399 aaPredicted RBP4.86□□□□□ -1.63
SPTLC1-205ENST00000477888 DUSP14O95147 198 aaKnown RBP4.86□□□□□ -1.63
SPTLC1-205ENST00000477888 HSMCR30P0CW71 290 aa4.86□□□□□ -1.63
SPTLC1-205ENST00000477888 PSG1P11464 419 aa4.86□□□□□ -1.63
SPTLC1-205ENST00000477888 PSMA1P25786 263 aaKnown RBP4.86□□□□□ -1.63
SPTLC1-205ENST00000477888 PSMB9P28065 219 aa4.86□□□□□ -1.63
SPTLC1-205ENST00000477888 TIRAPP58753 221 aa4.86□□□□□ -1.63
SPTLC1-205ENST00000477888 CMTM1Q8IZ96 169 aa4.86□□□□□ -1.63
SPTLC1-205ENST00000477888 SLC35G3Q8N808 338 aa4.86□□□□□ -1.63
SPTLC1-205ENST00000477888 SLC24A4Q8NFF2 622 aa4.86□□□□□ -1.63
SPTLC1-205ENST00000477888 LINC00467Q9BRT7 94 aa4.86□□□□□ -1.63
SPTLC1-205ENST00000477888 CHAC1Q9BUX1 264 aa4.86□□□□□ -1.63
SPTLC1-205ENST00000477888 CTDSP1Q9GZU7 261 aa4.86□□□□□ -1.63
SPTLC1-205ENST00000477888 TMPRSS5Q9H3S3 457 aa4.86□□□□□ -1.63
SPTLC1-205ENST00000477888 GPR31O00270 319 aa4.85□□□□□ -1.63
SPTLC1-205ENST00000477888 PDCD5O14737 125 aa4.85□□□□□ -1.63
SPTLC1-205ENST00000477888 TRIAP1O43715 76 aa4.85□□□□□ -1.63
SPTLC1-205ENST00000477888 RLN2P04090 185 aa4.85□□□□□ -1.63
SPTLC1-205ENST00000477888 FCER2P06734 321 aa4.85□□□□□ -1.63
SPTLC1-205ENST00000477888 SLC25A4P12235 298 aa4.85□□□□□ -1.63
SPTLC1-205ENST00000477888 EVI2AP22794 236 aa4.85□□□□□ -1.63
SPTLC1-205ENST00000477888 NUP62P37198 522 aaPredicted RBP4.85□□□□□ -1.63
SPTLC1-205ENST00000477888 HERV-K104P61576 105 aa4.85□□□□□ -1.63
SPTLC1-205ENST00000477888 SUPT4H1P63272 117 aaKnown RBP4.85□□□□□ -1.63
SPTLC1-205ENST00000477888 RNF151Q2KHN1 245 aa4.85□□□□□ -1.63
SPTLC1-205ENST00000477888 SAMD13Q5VXD3 122 aa4.85□□□□□ -1.63
SPTLC1-205ENST00000477888 OR8G2PQ6IF36 304 aa4.85□□□□□ -1.63
SPTLC1-205ENST00000477888 ZFP1Q6P2D0 407 aa4.85□□□□□ -1.63
SPTLC1-205ENST00000477888 SFXN4Q6P4A7 337 aa4.85□□□□□ -1.63
SPTLC1-205ENST00000477888 CIRBP-AS1Q8TBR5 109 aa4.85□□□□□ -1.63
SPTLC1-205ENST00000477888 NPIPB3Q92617 1050 aa4.85□□□□□ -1.63
SPTLC1-205ENST00000477888 MRGPRFQ96AM1 343 aa4.85□□□□□ -1.63
SPTLC1-205ENST00000477888 SLC25A39Q9BZJ4 359 aaPredicted RBP4.85□□□□□ -1.63
SPTLC1-205ENST00000477888 ACOT13Q9NPJ3 140 aa4.85□□□□□ -1.63
SPTLC1-205ENST00000477888 FAT4Q6V0I7 4981 aa4.84□□□□□ -1.63
SPTLC1-205ENST00000477888 BOLA2-SMG1P6H3BVE0 249 aa4.84□□□□□ -1.63
SPTLC1-205ENST00000477888 H7BYZ3 331 aa4.84□□□□□ -1.63
SPTLC1-205ENST00000477888 PSCAO43653 123 aa4.84□□□□□ -1.63
SPTLC1-205ENST00000477888 ZNF324O75467 553 aaPredicted RBP4.84□□□□□ -1.63
SPTLC1-205ENST00000477888 CIB2O75838 187 aa4.84□□□□□ -1.63
SPTLC1-205ENST00000477888 SCGNO76038 276 aa4.84□□□□□ -1.63
SPTLC1-205ENST00000477888 IGKV1-5P01602 117 aa4.84□□□□□ -1.63
SPTLC1-205ENST00000477888 GNAO1P09471 354 aa4.84□□□□□ -1.63
SPTLC1-205ENST00000477888 RAB3BP20337 219 aa4.84□□□□□ -1.63
SPTLC1-205ENST00000477888 RFX2P48378 723 aa4.84□□□□□ -1.63
SPTLC1-205ENST00000477888 Q6ZTI0 123 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms