RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 FGF7P21781 194 aa13.21□□□□□ -0.3
PTPN7-209ENST00000477554 OR10J1P30954 320 aa13.21□□□□□ -0.3
PTPN7-209ENST00000477554 RPL7L1Q6DKI1 246 aaKnown RBP13.21□□□□□ -0.3
PTPN7-209ENST00000477554 SPSB3Q6PJ21 355 aa13.21□□□□□ -0.3
PTPN7-209ENST00000477554 SLC51BQ86UW2 128 aa13.21□□□□□ -0.3
PTPN7-209ENST00000477554 CYTL1Q9NRR1 136 aa13.21□□□□□ -0.3
PTPN7-209ENST00000477554 TECRQ9NZ01 308 aaKnown RBP13.21□□□□□ -0.3
PTPN7-209ENST00000477554 A8MZ25 164 aa13.2□□□□□ -0.3
PTPN7-209ENST00000477554 APOHP02749 345 aaPredicted RBP13.2□□□□□ -0.3
PTPN7-209ENST00000477554 HAGHQ16775 308 aa13.2□□□□□ -0.3
PTPN7-209ENST00000477554 GTSCR1Q86UQ5 136 aa13.2□□□□□ -0.3
PTPN7-209ENST00000477554 RCHY1Q96PM5 261 aa13.2□□□□□ -0.3
PTPN7-209ENST00000477554 CITED4Q96RK1 184 aa13.2□□□□□ -0.3
PTPN7-209ENST00000477554 TRGV9Q99603 122 aa13.2□□□□□ -0.3
PTPN7-209ENST00000477554 UFC1Q9Y3C8 167 aa13.2□□□□□ -0.3
PTPN7-209ENST00000477554 NUPL2O15504 423 aaKnown RBP13.19□□□□□ -0.3
PTPN7-209ENST00000477554 FABP1P07148 127 aa13.19□□□□□ -0.3
PTPN7-209ENST00000477554 TPT1P13693 172 aaKnown RBP13.19□□□□□ -0.3
PTPN7-209ENST00000477554 TM2D3Q9BRN9 247 aa13.19□□□□□ -0.3
PTPN7-209ENST00000477554 DAZ1Q9NQZ3 744 aaKnown RBP13.19□□□□□ -0.3
PTPN7-209ENST00000477554 MRPL27Q9P0M9 148 aaKnown RBP13.19□□□□□ -0.3
PTPN7-209ENST00000477554 CSMD3Q7Z407 3707 aa13.18□□□□□ -0.3
PTPN7-209ENST00000477554 IGKV1OR2-108A0A075B7D4 117 aa13.18□□□□□ -0.3
PTPN7-209ENST00000477554 C17orf112F2Z3M2 114 aa13.18□□□□□ -0.3
PTPN7-209ENST00000477554 YIF1AO95070 293 aa13.18□□□□□ -0.3
PTPN7-209ENST00000477554 IGLC1P0CG04 106 aa13.18□□□□□ -0.3
PTPN7-209ENST00000477554 TOMM20LQ6UXN7 152 aa13.18□□□□□ -0.3
PTPN7-209ENST00000477554 LINC00322Q6ZN03 302 aaPredicted RBP13.18□□□□□ -0.3
PTPN7-209ENST00000477554 ZNF709Q8N972 641 aa13.18□□□□□ -0.3
PTPN7-209ENST00000477554 STOML3Q8TAV4 291 aa13.18□□□□□ -0.3
PTPN7-209ENST00000477554 GNPNAT1Q96EK6 184 aaPredicted RBP13.18□□□□□ -0.3
PTPN7-209ENST00000477554 RNF2Q99496 336 aa13.18□□□□□ -0.3
PTPN7-209ENST00000477554 NPCDR1Q9BY65 106 aa13.18□□□□□ -0.3
PTPN7-209ENST00000477554 ZFAND3Q9H8U3 227 aa13.18□□□□□ -0.3
PTPN7-209ENST00000477554 UBQLN2Q9UHD9 624 aa13.18□□□□□ -0.3
PTPN7-209ENST00000477554 BOLA1Q9Y3E2 137 aa13.18□□□□□ -0.3
PTPN7-209ENST00000477554 STARD9Q9P2P6 4700 aa13.18□□□□□ -0.3
PTPN7-209ENST00000477554 IGKV1D-37A0A075B6S9 117 aa13.17□□□□□ -0.3
PTPN7-209ENST00000477554 IGHV3-66A0A0C4DH42 116 aa13.17□□□□□ -0.3
PTPN7-209ENST00000477554 OR11H12B2RN74 326 aa13.17□□□□□ -0.3
PTPN7-209ENST00000477554 AGPAT2O15120 278 aa13.17□□□□□ -0.3
PTPN7-209ENST00000477554 CAMLGP49069 296 aa13.17□□□□□ -0.3
PTPN7-209ENST00000477554 ELLP55199 621 aaPredicted RBP13.17□□□□□ -0.3
PTPN7-209ENST00000477554 SELENOTP62341 195 aa13.17□□□□□ -0.3
PTPN7-209ENST00000477554 BAP18Q8IXM2 172 aa13.17□□□□□ -0.3
PTPN7-209ENST00000477554 HSD17B11Q8NBQ5 300 aa13.17□□□□□ -0.3
PTPN7-209ENST00000477554 WWC2-AS2Q96NR7 200 aa13.17□□□□□ -0.3
PTPN7-209ENST00000477554 MGST2Q99735 147 aa13.17□□□□□ -0.3
PTPN7-209ENST00000477554 GINS3Q9BRX5 216 aa13.17□□□□□ -0.3
PTPN7-209ENST00000477554 ARV1Q9H2C2 271 aa13.17□□□□□ -0.3
PTPN7-209ENST00000477554 TUBA4BQ9H853 241 aa13.17□□□□□ -0.3
PTPN7-209ENST00000477554 SRD5A3Q9H8P0 318 aa13.17□□□□□ -0.3
PTPN7-209ENST00000477554 KCNIP2Q9NS61 270 aa13.17□□□□□ -0.3
PTPN7-209ENST00000477554 YPEL3P61236 119 aaPredicted RBP13.16□□□□□ -0.3
PTPN7-209ENST00000477554 RELQ04864 619 aaPredicted RBP13.16□□□□□ -0.3
PTPN7-209ENST00000477554 TIGITQ495A1 244 aa13.16□□□□□ -0.3
PTPN7-209ENST00000477554 CYP2G1PQ6ZSU1 146 aa13.16□□□□□ -0.3
PTPN7-209ENST00000477554 SMPXQ9UHP9 88 aa13.16□□□□□ -0.3
PTPN7-209ENST00000477554 TIMM9Q9Y5J7 89 aa13.16□□□□□ -0.3
PTPN7-209ENST00000477554 PUS1Q9Y606 427 aaKnown RBP eCLIP13.16□□□□□ -0.3
PTPN7-209ENST00000477554 RYR3Q15413 4870 aa13.16□□□□□ -0.3
PTPN7-209ENST00000477554 IGHV7-4-1A0A0J9YVY3 117 aa13.15□□□□□ -0.3
PTPN7-209ENST00000477554 CHEK1O14757 476 aa13.15□□□□□ -0.3
PTPN7-209ENST00000477554 IGKV1-17P01599 117 aa13.15□□□□□ -0.3
PTPN7-209ENST00000477554 ATP6V0CP27449 155 aa13.15□□□□□ -0.3
PTPN7-209ENST00000477554 RPL29P47914 159 aaKnown RBP13.15□□□□□ -0.3
PTPN7-209ENST00000477554 EIF5AL1Q6IS14 154 aaKnown RBP13.15□□□□□ -0.3
PTPN7-209ENST00000477554 MARC2Q969Z3 335 aa13.15□□□□□ -0.3
PTPN7-209ENST00000477554 FAM110AQ9BQ89 295 aa13.15□□□□□ -0.3
PTPN7-209ENST00000477554 PSMG3Q9BT73 122 aaPredicted RBP13.15□□□□□ -0.3
PTPN7-209ENST00000477554 GGTLC1Q9BX51 225 aa13.15□□□□□ -0.3
PTPN7-209ENST00000477554 IGKV3-7A0A075B6H7 116 aa13.14□□□□□ -0.31
PTPN7-209ENST00000477554 K7EMT4 169 aa13.14□□□□□ -0.31
PTPN7-209ENST00000477554 TOMM40O96008 361 aa13.14□□□□□ -0.31
PTPN7-209ENST00000477554 CFDP00746 253 aaPredicted RBP13.14□□□□□ -0.31
PTPN7-209ENST00000477554 RD3LP0DJH9 198 aa13.14□□□□□ -0.31
PTPN7-209ENST00000477554 ZNF90Q03938 601 aa13.14□□□□□ -0.31
PTPN7-209ENST00000477554 ZNF124Q15973 351 aa13.14□□□□□ -0.31
PTPN7-209ENST00000477554 ZNF600Q6ZNG1 722 aa13.14□□□□□ -0.31
PTPN7-209ENST00000477554 BPIFCQ8NFQ6 507 aa13.14□□□□□ -0.31
PTPN7-209ENST00000477554 Q8WTZ3 238 aa13.14□□□□□ -0.31
PTPN7-209ENST00000477554 ST8SIA2Q92186 375 aa13.14□□□□□ -0.31
PTPN7-209ENST00000477554 RSG1Q9BU20 258 aa13.14□□□□□ -0.31
PTPN7-209ENST00000477554 RHPN1-AS1Q9BWJ2 59 aa13.14□□□□□ -0.31
PTPN7-209ENST00000477554 SLC45A2Q9UMX9 530 aa13.14□□□□□ -0.31
PTPN7-209ENST00000477554 SERF2P84101 59 aa13.13□□□□□ -0.31
PTPN7-209ENST00000477554 ODF3L2Q3SX64 289 aa13.13□□□□□ -0.31
PTPN7-209ENST00000477554 RBPMS2Q6ZRY4 209 aaKnown RBP13.13□□□□□ -0.31
PTPN7-209ENST00000477554 SEC11BP0C7V7 166 aa13.13□□□□□ -0.31
PTPN7-209ENST00000477554 SPP1P10451 314 aa13.13□□□□□ -0.31
PTPN7-209ENST00000477554 PSG1P11464 419 aa13.13□□□□□ -0.31
PTPN7-209ENST00000477554 TFPI2P48307 235 aa13.13□□□□□ -0.31
PTPN7-209ENST00000477554 B2MP61769 119 aa13.13□□□□□ -0.31
PTPN7-209ENST00000477554 Q6ZRG5 221 aa13.13□□□□□ -0.31
PTPN7-209ENST00000477554 OR51G1Q8NGK1 321 aa13.13□□□□□ -0.31
PTPN7-209ENST00000477554 PHYHIPLQ96FC7 376 aa13.13□□□□□ -0.31
PTPN7-209ENST00000477554 SLC25A32Q9H2D1 315 aa13.13□□□□□ -0.31
PTPN7-209ENST00000477554 PXMP4Q9Y6I8 212 aa13.13□□□□□ -0.31
PTPN7-209ENST00000477554 TSPAN4O14817 238 aa13.12□□□□□ -0.31
PTPN7-209ENST00000477554 PRR20EP86478 221 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 168.6 ms