RNA–Protein interactions for RNA: ENST00000477523.1

RGPD5-209, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

TSL 1 (best)

Gene RGPD5, Length 6,902 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-209ENST00000477523 SSBP2P81877 361 aaPredicted RBP3.58□□□□□ -1.84
RGPD5-209ENST00000477523 PMS2P11Q13670 270 aa3.58□□□□□ -1.84
RGPD5-209ENST00000477523 BAGE2Q86Y30 109 aa3.58□□□□□ -1.84
RGPD5-209ENST00000477523 SHANK2-AS3Q9BTD1 123 aa3.58□□□□□ -1.84
RGPD5-209ENST00000477523 ARL2-SNX15V9GYD0 113 aa3.58□□□□□ -1.84
RGPD5-209ENST00000477523 PSMB11A5LHX3 300 aa3.57□□□□□ -1.84
RGPD5-209ENST00000477523 C1orf196B1AJZ1 125 aa3.57□□□□□ -1.84
RGPD5-209ENST00000477523 HOXA3O43365 443 aaPredicted RBP3.57□□□□□ -1.84
RGPD5-209ENST00000477523 ADCYAP1P18509 176 aa3.57□□□□□ -1.84
RGPD5-209ENST00000477523 FLI1Q01543 452 aaPredicted RBP3.57□□□□□ -1.84
RGPD5-209ENST00000477523 PRR27Q6MZM9 219 aa3.57□□□□□ -1.84
RGPD5-209ENST00000477523 TEX38Q6PEX7 206 aa3.57□□□□□ -1.84
RGPD5-209ENST00000477523 HIST1H2BAQ96A08 127 aa3.57□□□□□ -1.84
RGPD5-209ENST00000477523 SLC25A39Q9BZJ4 359 aaPredicted RBP3.57□□□□□ -1.84
RGPD5-209ENST00000477523 AURKAIP1Q9NWT8 199 aaPredicted RBP3.57□□□□□ -1.84
RGPD5-209ENST00000477523 SOX21Q9Y651 276 aaPredicted RBP3.57□□□□□ -1.84
RGPD5-209ENST00000477523 A0A1W2PPQ1 181 aa3.57□□□□□ -1.84
RGPD5-209ENST00000477523 SIGLECL1Q8N7X8 197 aa3.57□□□□□ -1.84
RGPD5-209ENST00000477523 ZNF502Q8TBZ5 544 aa3.57□□□□□ -1.84
RGPD5-209ENST00000477523 TCEAL7Q9BRU2 100 aa3.57□□□□□ -1.84
RGPD5-209ENST00000477523 SCRT1Q9BWW7 348 aa3.57□□□□□ -1.84
RGPD5-209ENST00000477523 CTDSP1Q9GZU7 261 aa3.57□□□□□ -1.84
RGPD5-209ENST00000477523 DSCAMO60469 2012 aa3.57□□□□□ -1.84
RGPD5-209ENST00000477523 PLP1P60201 277 aa3.57□□□□□ -1.84
RGPD5-209ENST00000477523 PSG9Q00887 426 aa3.57□□□□□ -1.84
RGPD5-209ENST00000477523 BCL6BQ8N143 479 aaPredicted RBP3.57□□□□□ -1.84
RGPD5-209ENST00000477523 NDFIP1Q9BT67 221 aa3.57□□□□□ -1.84
RGPD5-209ENST00000477523 CHRDL1Q9BU40 450 aa3.57□□□□□ -1.84
RGPD5-209ENST00000477523 MTORP42345 2549 aa3.57□□□□□ -1.84
RGPD5-209ENST00000477523 FAM74A7A6NL05 159 aa3.57□□□□□ -1.84
RGPD5-209ENST00000477523 ZNF207O43670 478 aaKnown RBP3.57□□□□□ -1.84
RGPD5-209ENST00000477523 CD81P60033 236 aa3.57□□□□□ -1.84
RGPD5-209ENST00000477523 ATRAIDQ6UW56 229 aa3.57□□□□□ -1.84
RGPD5-209ENST00000477523 SDF2L1Q9HCN8 221 aa3.57□□□□□ -1.84
RGPD5-209ENST00000477523 CELSR3Q9NYQ7 3312 aa3.57□□□□□ -1.84
RGPD5-209ENST00000477523 IGHV3-49A0A0A0MS15 119 aa3.57□□□□□ -1.84
RGPD5-209ENST00000477523 SCO2A0A1W2PP80 73 aa3.57□□□□□ -1.84
RGPD5-209ENST00000477523 LINC01548A6NM66 108 aa3.57□□□□□ -1.84
RGPD5-209ENST00000477523 ERVFC1-1P60608 527 aa3.57□□□□□ -1.84
RGPD5-209ENST00000477523 MRGPRG-AS1Q2M3A8 158 aa3.57□□□□□ -1.84
RGPD5-209ENST00000477523 PATE2Q6UY27 113 aa3.57□□□□□ -1.84
RGPD5-209ENST00000477523 ZNF491Q8N8L2 437 aa3.57□□□□□ -1.84
RGPD5-209ENST00000477523 IGKV1D-37A0A075B6S9 117 aa3.56□□□□□ -1.84
RGPD5-209ENST00000477523 IGF1P05019 195 aa3.56□□□□□ -1.84
RGPD5-209ENST00000477523 CTSGP08311 255 aa3.56□□□□□ -1.84
RGPD5-209ENST00000477523 FAM90A2PQ658T7 463 aa3.56□□□□□ -1.84
RGPD5-209ENST00000477523 OR10G8Q8NGN5 311 aa3.56□□□□□ -1.84
RGPD5-209ENST00000477523 ISOC2Q96AB3 205 aa3.56□□□□□ -1.84
RGPD5-209ENST00000477523 ZNF48Q96MX3 618 aaPredicted RBP3.56□□□□□ -1.84
RGPD5-209ENST00000477523 BOD1L1Q8NFC6 3051 aa3.56□□□□□ -1.84
RGPD5-209ENST00000477523 ZZEF1O43149 2961 aa3.56□□□□□ -1.84
RGPD5-209ENST00000477523 PPP5D1E7EU14 171 aa3.56□□□□□ -1.84
RGPD5-209ENST00000477523 GGCTO75223 188 aaKnown RBP3.56□□□□□ -1.84
RGPD5-209ENST00000477523 S100A9P06702 114 aaKnown RBP3.56□□□□□ -1.84
RGPD5-209ENST00000477523 ELANEP08246 267 aa3.56□□□□□ -1.84
RGPD5-209ENST00000477523 RAB4BP61018 213 aa3.56□□□□□ -1.84
RGPD5-209ENST00000477523 FAM24BQ8N5W8 94 aa3.56□□□□□ -1.84
RGPD5-209ENST00000477523 GPR82Q96P67 336 aa3.56□□□□□ -1.84
RGPD5-209ENST00000477523 PEX7O00628 323 aa3.56□□□□□ -1.84
RGPD5-209ENST00000477523 RPL35P42766 123 aaKnown RBP3.56□□□□□ -1.84
RGPD5-209ENST00000477523 MEOX2P50222 304 aa3.56□□□□□ -1.84
RGPD5-209ENST00000477523 RNF212Q495C1 297 aa3.56□□□□□ -1.84
RGPD5-209ENST00000477523 ASPHD1Q5U4P2 390 aa3.56□□□□□ -1.84
RGPD5-209ENST00000477523 TMEM190Q8WZ59 177 aa3.56□□□□□ -1.84
RGPD5-209ENST00000477523 ANAPC16Q96DE5 110 aa3.56□□□□□ -1.84
RGPD5-209ENST00000477523 Q9H3A6 140 aa3.56□□□□□ -1.84
RGPD5-209ENST00000477523 OTORQ9NRC9 128 aa3.56□□□□□ -1.84
RGPD5-209ENST00000477523 YTHDF2Q9Y5A9 579 aaKnown RBP3.56□□□□□ -1.84
RGPD5-209ENST00000477523 GATCO43716 136 aaKnown RBP3.56□□□□□ -1.84
RGPD5-209ENST00000477523 CD5LO43866 347 aa3.56□□□□□ -1.84
RGPD5-209ENST00000477523 TMEM95Q3KNT9 176 aa3.56□□□□□ -1.84
RGPD5-209ENST00000477523 Q6YL49 198 aa3.56□□□□□ -1.84
RGPD5-209ENST00000477523 TMEM86BQ8N661 226 aa3.56□□□□□ -1.84
RGPD5-209ENST00000477523 AJUBAQ96IF1 538 aa3.56□□□□□ -1.84
RGPD5-209ENST00000477523 AMY1AP04745 511 aa3.56□□□□□ -1.84
RGPD5-209ENST00000477523 TAS2R60P59551 318 aa3.56□□□□□ -1.84
RGPD5-209ENST00000477523 USF2Q15853 346 aaPredicted RBP3.56□□□□□ -1.84
RGPD5-209ENST00000477523 TOMM20LQ6UXN7 152 aa3.56□□□□□ -1.84
RGPD5-209ENST00000477523 ATP6V0BQ99437 205 aa3.56□□□□□ -1.84
RGPD5-209ENST00000477523 ABCA2Q9BZC7 2435 aa3.56□□□□□ -1.84
RGPD5-209ENST00000477523 ADMP35318 185 aa3.56□□□□□ -1.84
RGPD5-209ENST00000477523 CENPWQ5EE01 88 aa3.56□□□□□ -1.84
RGPD5-209ENST00000477523 GOLT1AQ6ZVE7 132 aa3.56□□□□□ -1.84
RGPD5-209ENST00000477523 PIFOQ8TCI5 191 aa3.56□□□□□ -1.84
RGPD5-209ENST00000477523 C1orf159Q96HA4 380 aa3.56□□□□□ -1.84
RGPD5-209ENST00000477523 SLC50A1Q9BRV3 221 aa3.56□□□□□ -1.84
RGPD5-209ENST00000477523 PPP1R14DQ9NXH3 145 aa3.56□□□□□ -1.84
RGPD5-209ENST00000477523 UFC1Q9Y3C8 167 aa3.56□□□□□ -1.84
RGPD5-209ENST00000477523 IGKV3-7A0A075B6H7 116 aa3.55□□□□□ -1.84
RGPD5-209ENST00000477523 H3BRN7 92 aa3.55□□□□□ -1.84
RGPD5-209ENST00000477523 FRZBQ92765 325 aa3.55□□□□□ -1.84
RGPD5-209ENST00000477523 BORCS7Q96B45 105 aa3.55□□□□□ -1.84
RGPD5-209ENST00000477523 IGHV3-66A0A0C4DH42 116 aa3.55□□□□□ -1.84
RGPD5-209ENST00000477523 CXorf65A6NEN9 183 aa3.55□□□□□ -1.84
RGPD5-209ENST00000477523 ZNF705GA8MUZ8 300 aaPredicted RBP3.55□□□□□ -1.84
RGPD5-209ENST00000477523 AKR1D1P51857 326 aa3.55□□□□□ -1.84
RGPD5-209ENST00000477523 RPL15P61313 204 aaKnown RBP3.55□□□□□ -1.84
RGPD5-209ENST00000477523 RPL23P62829 140 aaKnown RBP3.55□□□□□ -1.84
RGPD5-209ENST00000477523 C9orf139Q6ZV77 190 aa3.55□□□□□ -1.84
RGPD5-209ENST00000477523 ATG101Q9BSB4 218 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms