RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 JOSD1Q15040 202 aaPredicted RBP8.93□□□□□ -0.98
COL27A1-204ENST00000477421 PRSS33Q8NF86 280 aa8.93□□□□□ -0.98
COL27A1-204ENST00000477421 KCNS1Q96KK3 526 aa8.93□□□□□ -0.98
COL27A1-204ENST00000477421 CHODLQ9H9P2 273 aa8.93□□□□□ -0.98
COL27A1-204ENST00000477421 SIGLEC9Q9Y336 463 aa8.93□□□□□ -0.98
COL27A1-204ENST00000477421 M0R3E3 92 aa8.93□□□□□ -0.98
COL27A1-204ENST00000477421 RPL7P18124 248 aaKnown RBP8.93□□□□□ -0.98
COL27A1-204ENST00000477421 CFHR2P36980 270 aa8.93□□□□□ -0.98
COL27A1-204ENST00000477421 HBBP68871 147 aa8.93□□□□□ -0.98
COL27A1-204ENST00000477421 TCF15Q12870 199 aa8.93□□□□□ -0.98
COL27A1-204ENST00000477421 PMCHL1Q16048 86 aa8.93□□□□□ -0.98
COL27A1-204ENST00000477421 CLEC19AQ6UXS0 136 aa8.93□□□□□ -0.98
COL27A1-204ENST00000477421 ODF3L1Q8IXM7 274 aa8.93□□□□□ -0.98
COL27A1-204ENST00000477421 RNF125Q96EQ8 232 aa8.93□□□□□ -0.98
COL27A1-204ENST00000477421 SNAI2O43623 268 aa8.93□□□□□ -0.98
COL27A1-204ENST00000477421 CKS2P33552 79 aa8.93□□□□□ -0.98
COL27A1-204ENST00000477421 GATA4P43694 442 aa8.93□□□□□ -0.98
COL27A1-204ENST00000477421 SPANXN1Q5VSR9 72 aa8.93□□□□□ -0.98
COL27A1-204ENST00000477421 CIARTQ8N365 385 aaPredicted RBP8.93□□□□□ -0.98
COL27A1-204ENST00000477421 NUDT10Q8NFP7 164 aa8.93□□□□□ -0.98
COL27A1-204ENST00000477421 NUDT11Q96G61 164 aa8.93□□□□□ -0.98
COL27A1-204ENST00000477421 C16orf92Q96LL3 132 aa8.93□□□□□ -0.98
COL27A1-204ENST00000477421 NRN1Q9NPD7 142 aa8.93□□□□□ -0.98
COL27A1-204ENST00000477421 POLQO75417 2590 aa8.93□□□□□ -0.98
COL27A1-204ENST00000477421 COL6A3P12111 3177 aa8.93□□□□□ -0.98
COL27A1-204ENST00000477421 CBY3A6NI87 242 aa8.92□□□□□ -0.98
COL27A1-204ENST00000477421 PPIFP30405 207 aaKnown RBP8.92□□□□□ -0.98
COL27A1-204ENST00000477421 TMEM219Q86XT9 240 aa8.92□□□□□ -0.98
COL27A1-204ENST00000477421 Q8TCH9 128 aa8.92□□□□□ -0.98
COL27A1-204ENST00000477421 HLA-DRB1P01911 266 aa8.92□□□□□ -0.98
COL27A1-204ENST00000477421 CD99P14209 185 aa8.92□□□□□ -0.98
COL27A1-204ENST00000477421 TAS2R60P59551 318 aa8.92□□□□□ -0.98
COL27A1-204ENST00000477421 DAZAP2Q15038 168 aaPredicted RBP8.92□□□□□ -0.98
COL27A1-204ENST00000477421 IGFL2Q6UWQ7 119 aa8.92□□□□□ -0.98
COL27A1-204ENST00000477421 BUB1B-PAK6H3BSN5 160 aa8.92□□□□□ -0.98
COL27A1-204ENST00000477421 IGHV2-5P01817 119 aa8.92□□□□□ -0.98
COL27A1-204ENST00000477421 COMPP49747 757 aaPredicted RBP8.92□□□□□ -0.98
COL27A1-204ENST00000477421 PTTG1IPP53801 180 aa8.92□□□□□ -0.98
COL27A1-204ENST00000477421 ZNF124Q15973 351 aa8.92□□□□□ -0.98
COL27A1-204ENST00000477421 CYB5R2Q6BCY4 276 aa8.92□□□□□ -0.98
COL27A1-204ENST00000477421 REC114Q7Z4M0 266 aa8.92□□□□□ -0.98
COL27A1-204ENST00000477421 CTSZQ9UBR2 303 aa8.92□□□□□ -0.98
COL27A1-204ENST00000477421 NDUFS7O75251 213 aa8.91□□□□□ -0.98
COL27A1-204ENST00000477421 THBDP07204 575 aa8.91□□□□□ -0.98
COL27A1-204ENST00000477421 FOXL1Q12952 345 aa8.91□□□□□ -0.98
COL27A1-204ENST00000477421 TMEM78Q5T7P6 136 aa8.91□□□□□ -0.98
COL27A1-204ENST00000477421 RPP21Q9H633 154 aaKnown RBP8.91□□□□□ -0.98
COL27A1-204ENST00000477421 OSTCQ9NRP0 149 aa8.91□□□□□ -0.98
COL27A1-204ENST00000477421 MYO15AQ9UKN7 3530 aa8.91□□□□□ -0.98
COL27A1-204ENST00000477421 GGTLC3B5MD39 225 aa8.91□□□□□ -0.98
COL27A1-204ENST00000477421 M0QZ24 198 aa8.91□□□□□ -0.98
COL27A1-204ENST00000477421 IGKV3-20P01619 116 aa8.91□□□□□ -0.98
COL27A1-204ENST00000477421 SMIM17P0DL12 118 aa8.91□□□□□ -0.98
COL27A1-204ENST00000477421 NPPCP23582 126 aa8.91□□□□□ -0.98
COL27A1-204ENST00000477421 BRWD1-AS2P59051 145 aa8.91□□□□□ -0.98
COL27A1-204ENST00000477421 RPL15P61313 204 aaKnown RBP8.91□□□□□ -0.98
COL27A1-204ENST00000477421 SSBP2P81877 361 aaPredicted RBP8.91□□□□□ -0.98
COL27A1-204ENST00000477421 K7ENP7 123 aa8.91□□□□□ -0.98
COL27A1-204ENST00000477421 ZNF295-AS1Q8N0V1 137 aa8.91□□□□□ -0.98
COL27A1-204ENST00000477421 GRAMD2BQ96HH9 432 aa8.91□□□□□ -0.98
COL27A1-204ENST00000477421 MGPP08493 103 aa8.9□□□□□ -0.98
COL27A1-204ENST00000477421 CX3CL1P78423 397 aa8.9□□□□□ -0.98
COL27A1-204ENST00000477421 TMEM155Q4W5P6 130 aa8.9□□□□□ -0.98
COL27A1-204ENST00000477421 LCN12Q6JVE5 192 aa8.9□□□□□ -0.98
COL27A1-204ENST00000477421 ZNF738Q8NE65 137 aa8.9□□□□□ -0.98
COL27A1-204ENST00000477421 C18orf15Q96N68 181 aa8.9□□□□□ -0.98
COL27A1-204ENST00000477421 PARD6GQ9BYG4 376 aaPredicted RBP8.9□□□□□ -0.98
COL27A1-204ENST00000477421 IZUMO1RA6ND01 250 aa8.9□□□□□ -0.98
COL27A1-204ENST00000477421 OR5AN1Q8NGI8 311 aa8.9□□□□□ -0.98
COL27A1-204ENST00000477421 METTL26Q96S19 204 aa8.9□□□□□ -0.98
COL27A1-204ENST00000477421 KLK15Q9H2R5 256 aa8.9□□□□□ -0.98
COL27A1-204ENST00000477421 FNDC4Q9H6D8 234 aaPredicted RBP8.9□□□□□ -0.98
COL27A1-204ENST00000477421 NDUFA4L2Q9NRX3 87 aa8.9□□□□□ -0.98
COL27A1-204ENST00000477421 TRBV9A0A0B4J1U6 114 aa8.9□□□□□ -0.99
COL27A1-204ENST00000477421 NDUFS6O75380 124 aaKnown RBP8.9□□□□□ -0.99
COL27A1-204ENST00000477421 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.9□□□□□ -0.99
COL27A1-204ENST00000477421 BRD3OSQ6XYD6 125 aa8.9□□□□□ -0.99
COL27A1-204ENST00000477421 TMEM136Q6ZRR5 245 aa8.9□□□□□ -0.99
COL27A1-204ENST00000477421 TRAV30A0A087WSZ9 112 aa8.89□□□□□ -0.99
COL27A1-204ENST00000477421 NMUP48645 174 aa8.89□□□□□ -0.99
COL27A1-204ENST00000477421 OR4B1Q8NGF8 309 aa8.89□□□□□ -0.99
COL27A1-204ENST00000477421 NEU4Q8WWR8 484 aaPredicted RBP8.89□□□□□ -0.99
COL27A1-204ENST00000477421 CBY1Q9Y3M2 126 aa8.89□□□□□ -0.99
COL27A1-204ENST00000477421 A0A1B0GUT8 65 aa8.89□□□□□ -0.99
COL27A1-204ENST00000477421 NPIPB5A8MRT5 1133 aa8.89□□□□□ -0.99
COL27A1-204ENST00000477421 TRGV3P03979 118 aa8.89□□□□□ -0.99
COL27A1-204ENST00000477421 RPLP1P05386 114 aaKnown RBP8.89□□□□□ -0.99
COL27A1-204ENST00000477421 ZNF138P52744 262 aa8.89□□□□□ -0.99
COL27A1-204ENST00000477421 SLC25A39Q9BZJ4 359 aaPredicted RBP8.89□□□□□ -0.99
COL27A1-204ENST00000477421 C11orf1Q9H5F2 150 aa8.89□□□□□ -0.99
COL27A1-204ENST00000477421 AP5S1Q9NUS5 200 aa8.89□□□□□ -0.99
COL27A1-204ENST00000477421 IFITM10A6NMD0 228 aa8.89□□□□□ -0.99
COL27A1-204ENST00000477421 PDLIM4P50479 330 aa8.89□□□□□ -0.99
COL27A1-204ENST00000477421 RHOGP84095 191 aa8.89□□□□□ -0.99
COL27A1-204ENST00000477421 ACTL10Q5JWF8 245 aa8.89□□□□□ -0.99
COL27A1-204ENST00000477421 ERASQ7Z444 233 aa8.89□□□□□ -0.99
COL27A1-204ENST00000477421 C8orf46Q8TAG6 207 aa8.89□□□□□ -0.99
COL27A1-204ENST00000477421 MCRIP2Q9BUT9 160 aaKnown RBP8.89□□□□□ -0.99
COL27A1-204ENST00000477421 CDC42EP3Q9UKI2 254 aa8.89□□□□□ -0.99
COL27A1-204ENST00000477421 KIAA1549Q9HCM3 1950 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms