RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 NHLH2Q02577 135 aa9.22□□□□□ -0.93
CLCNKA-205ENST00000477360 HAGHQ16775 308 aa9.22□□□□□ -0.93
CLCNKA-205ENST00000477360 SAMD13Q5VXD3 122 aa9.22□□□□□ -0.93
CLCNKA-205ENST00000477360 TCF24Q7RTU0 167 aa9.22□□□□□ -0.93
CLCNKA-205ENST00000477360 ZNF546Q86UE3 836 aa9.22□□□□□ -0.93
CLCNKA-205ENST00000477360 KIR2DL5AQ8N109 375 aa9.22□□□□□ -0.93
CLCNKA-205ENST00000477360 KIR2DL5BQ8NHK3 375 aa9.22□□□□□ -0.93
CLCNKA-205ENST00000477360 ST8SIA2Q92186 375 aa9.22□□□□□ -0.93
CLCNKA-205ENST00000477360 RNF125Q96EQ8 232 aa9.22□□□□□ -0.93
CLCNKA-205ENST00000477360 WWC2-AS2Q96NR7 200 aa9.22□□□□□ -0.93
CLCNKA-205ENST00000477360 SRD5A3Q9H8P0 318 aa9.22□□□□□ -0.93
CLCNKA-205ENST00000477360 RABAC1Q9UI14 185 aa9.22□□□□□ -0.93
CLCNKA-205ENST00000477360 TENM3Q9P273 2699 aa9.22□□□□□ -0.93
CLCNKA-205ENST00000477360 RNF222A6NCQ9 220 aa9.21□□□□□ -0.94
CLCNKA-205ENST00000477360 UBE2CO00762 179 aa9.21□□□□□ -0.94
CLCNKA-205ENST00000477360 BUB3O43684 328 aa9.21□□□□□ -0.94
CLCNKA-205ENST00000477360 ODF3L2Q3SX64 289 aa9.21□□□□□ -0.94
CLCNKA-205ENST00000477360 C16orf54Q6UWD8 224 aa9.21□□□□□ -0.94
CLCNKA-205ENST00000477360 DEFB125Q8N687 156 aa9.21□□□□□ -0.94
CLCNKA-205ENST00000477360 TMEM147Q9BVK8 224 aa9.21□□□□□ -0.94
CLCNKA-205ENST00000477360 FBXL17Q9UF56 701 aa9.21□□□□□ -0.94
CLCNKA-205ENST00000477360 RNF24Q9Y225 148 aa9.21□□□□□ -0.94
CLCNKA-205ENST00000477360 IGKV1OR2-108A0A075B7D4 117 aa9.2□□□□□ -0.94
CLCNKA-205ENST00000477360 FXYD6-FXYD2A0A087WZ82 144 aa9.2□□□□□ -0.94
CLCNKA-205ENST00000477360 LOC102724200A0A096LPH7 203 aaPredicted RBP9.2□□□□□ -0.94
CLCNKA-205ENST00000477360 C1QBP02746 253 aa9.2□□□□□ -0.94
CLCNKA-205ENST00000477360 APOC4P55056 127 aa9.2□□□□□ -0.94
CLCNKA-205ENST00000477360 ZNF345Q14585 488 aa9.2□□□□□ -0.94
CLCNKA-205ENST00000477360 USF2Q15853 346 aaPredicted RBP9.2□□□□□ -0.94
CLCNKA-205ENST00000477360 S100A7AQ86SG5 101 aa9.2□□□□□ -0.94
CLCNKA-205ENST00000477360 LILRB2Q8N423 598 aa9.2□□□□□ -0.94
CLCNKA-205ENST00000477360 INO80EQ8NBZ0 244 aaPredicted RBP9.2□□□□□ -0.94
CLCNKA-205ENST00000477360 OR5C1Q8NGR4 320 aa9.2□□□□□ -0.94
CLCNKA-205ENST00000477360 GLMPQ8WWB7 406 aa9.2□□□□□ -0.94
CLCNKA-205ENST00000477360 RCHY1Q96PM5 261 aa9.2□□□□□ -0.94
CLCNKA-205ENST00000477360 GGTLC1Q9BX51 225 aa9.2□□□□□ -0.94
CLCNKA-205ENST00000477360 PARD6GQ9BYG4 376 aaPredicted RBP9.2□□□□□ -0.94
CLCNKA-205ENST00000477360 MS4A6AQ9H2W1 248 aa9.2□□□□□ -0.94
CLCNKA-205ENST00000477360 UQCC1Q9NVA1 299 aa9.2□□□□□ -0.94
CLCNKA-205ENST00000477360 WDR83OSQ9Y284 106 aa9.2□□□□□ -0.94
CLCNKA-205ENST00000477360 RBMY1BA6NDE4 496 aaKnown RBP9.19□□□□□ -0.94
CLCNKA-205ENST00000477360 RBMY1EA6NEQ0 496 aaKnown RBP9.19□□□□□ -0.94
CLCNKA-205ENST00000477360 MPDU1O75352 247 aa9.19□□□□□ -0.94
CLCNKA-205ENST00000477360 APOHP02749 345 aaPredicted RBP9.19□□□□□ -0.94
CLCNKA-205ENST00000477360 RBMY1DP0C7P1 496 aaKnown RBP9.19□□□□□ -0.94
CLCNKA-205ENST00000477360 OR2F1Q13607 317 aa9.19□□□□□ -0.94
CLCNKA-205ENST00000477360 PXDC1Q5TGL8 231 aa9.19□□□□□ -0.94
CLCNKA-205ENST00000477360 TEPPQ6URK8 271 aa9.19□□□□□ -0.94
CLCNKA-205ENST00000477360 TMEM217Q8N7C4 229 aa9.19□□□□□ -0.94
CLCNKA-205ENST00000477360 OR11H4Q8NGC9 324 aa9.19□□□□□ -0.94
CLCNKA-205ENST00000477360 ATP5SQ99766 215 aa9.19□□□□□ -0.94
CLCNKA-205ENST00000477360 ASCL2Q99929 193 aa9.19□□□□□ -0.94
CLCNKA-205ENST00000477360 TP53TG1Q9Y2A0 90 aa9.19□□□□□ -0.94
CLCNKA-205ENST00000477360 SMLR1H3BR10 107 aa9.18□□□□□ -0.94
CLCNKA-205ENST00000477360 K7EQG2 157 aa9.18□□□□□ -0.94
CLCNKA-205ENST00000477360 DNASE2O00115 360 aaPredicted RBP9.18□□□□□ -0.94
CLCNKA-205ENST00000477360 PLP1P60201 277 aa9.18□□□□□ -0.94
CLCNKA-205ENST00000477360 ZNF90Q03938 601 aa9.18□□□□□ -0.94
CLCNKA-205ENST00000477360 AKR1C1Q04828 323 aa9.18□□□□□ -0.94
CLCNKA-205ENST00000477360 Q6ZWC4 215 aa9.18□□□□□ -0.94
CLCNKA-205ENST00000477360 BPIFCQ8NFQ6 507 aa9.18□□□□□ -0.94
CLCNKA-205ENST00000477360 DCANP1Q8TF63 244 aa9.18□□□□□ -0.94
CLCNKA-205ENST00000477360 GPR82Q96P67 336 aa9.18□□□□□ -0.94
CLCNKA-205ENST00000477360 MFFQ9GZY8 342 aa9.18□□□□□ -0.94
CLCNKA-205ENST00000477360 IGHV3-49A0A0A0MS15 119 aa9.17□□□□□ -0.94
CLCNKA-205ENST00000477360 SMCO3A2RU48 225 aa9.17□□□□□ -0.94
CLCNKA-205ENST00000477360 TAAR5O14804 337 aa9.17□□□□□ -0.94
CLCNKA-205ENST00000477360 ARPC5O15511 151 aa9.17□□□□□ -0.94
CLCNKA-205ENST00000477360 KCNRGQ8N5I3 272 aa9.17□□□□□ -0.94
CLCNKA-205ENST00000477360 HYLS1Q96M11 299 aa9.17□□□□□ -0.94
CLCNKA-205ENST00000477360 CITED4Q96RK1 184 aa9.17□□□□□ -0.94
CLCNKA-205ENST00000477360 MAP6D1Q9H9H5 199 aa9.17□□□□□ -0.94
CLCNKA-205ENST00000477360 NRN1Q9NPD7 142 aa9.17□□□□□ -0.94
CLCNKA-205ENST00000477360 IGHV3OR16-13A0A075B7E8 117 aa9.16□□□□□ -0.94
CLCNKA-205ENST00000477360 IGHV3-74A0A0B4J1X5 117 aa9.16□□□□□ -0.94
CLCNKA-205ENST00000477360 A0A0D9SG52 128 aa9.16□□□□□ -0.94
CLCNKA-205ENST00000477360 MEOX2P50222 304 aa9.16□□□□□ -0.94
CLCNKA-205ENST00000477360 RPL11P62913 178 aaKnown RBP9.16□□□□□ -0.94
CLCNKA-205ENST00000477360 RAB31Q13636 194 aa9.16□□□□□ -0.94
CLCNKA-205ENST00000477360 ZNF266Q14584 549 aa9.16□□□□□ -0.94
CLCNKA-205ENST00000477360 TMEM41BQ5BJD5 291 aa9.16□□□□□ -0.94
CLCNKA-205ENST00000477360 SIGLEC15Q6ZMC9 328 aa9.16□□□□□ -0.94
CLCNKA-205ENST00000477360 CYP2G1PQ6ZSU1 146 aa9.16□□□□□ -0.94
CLCNKA-205ENST00000477360 WFDC3Q8IUB2 231 aa9.16□□□□□ -0.94
CLCNKA-205ENST00000477360 STPG3Q8N7X2 389 aa9.16□□□□□ -0.94
CLCNKA-205ENST00000477360 WDR61Q9GZS3 305 aaKnown RBP9.16□□□□□ -0.94
CLCNKA-205ENST00000477360 WFDC10AQ9H1F0 79 aa9.16□□□□□ -0.94
CLCNKA-205ENST00000477360 UBE2L5PA0A1B0GUS4 154 aa9.15□□□□□ -0.94
CLCNKA-205ENST00000477360 AGPAT2O15120 278 aa9.15□□□□□ -0.94
CLCNKA-205ENST00000477360 RPL29P47914 159 aaKnown RBP9.15□□□□□ -0.94
CLCNKA-205ENST00000477360 LYZP61626 148 aa9.15□□□□□ -0.94
CLCNKA-205ENST00000477360 SNRPD3P62318 126 aaKnown RBP9.15□□□□□ -0.94
CLCNKA-205ENST00000477360 CD300CQ08708 224 aa9.15□□□□□ -0.94
CLCNKA-205ENST00000477360 CLINT1Q14677 625 aa9.15□□□□□ -0.94
CLCNKA-205ENST00000477360 OPCMLQ14982 345 aa9.15□□□□□ -0.94
CLCNKA-205ENST00000477360 STXBP6Q8NFX7 210 aa9.15□□□□□ -0.94
CLCNKA-205ENST00000477360 MGST2Q99735 147 aa9.15□□□□□ -0.94
CLCNKA-205ENST00000477360 PBDC1Q9BVG4 233 aa9.15□□□□□ -0.94
CLCNKA-205ENST00000477360 HUWE1Q7Z6Z7 4374 aaKnown RBP9.14□□□□□ -0.95
CLCNKA-205ENST00000477360 IGHV3-66A0A0C4DH42 116 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms