RNA–Protein interactions for RNA: ENST00000477334.1

RBM39-231, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 949 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-231ENST00000477334 CCDC153Q494R4 210 aa1.62□□□□□ -2.15
RBM39-231ENST00000477334 C7orf65Q6ZTY9 151 aa1.62□□□□□ -2.15
RBM39-231ENST00000477334 LINC00301Q8NCQ3 95 aa1.62□□□□□ -2.15
RBM39-231ENST00000477334 OR5D16Q8NGK9 328 aa1.62□□□□□ -2.15
RBM39-231ENST00000477334 CCDC115Q96NT0 180 aa1.62□□□□□ -2.15
RBM39-231ENST00000477334 TXNDC17Q9BRA2 123 aa1.62□□□□□ -2.15
RBM39-231ENST00000477334 OR2H1Q9GZK4 316 aa1.62□□□□□ -2.15
RBM39-231ENST00000477334 CXCL16Q9H2A7 254 aa1.62□□□□□ -2.15
RBM39-231ENST00000477334 LRTM1Q9HBL6 345 aa1.62□□□□□ -2.15
RBM39-231ENST00000477334 HS3ST2Q9Y278 367 aa1.62□□□□□ -2.15
RBM39-231ENST00000477334 RIMBP3CA6NJZ7 1639 aa1.62□□□□□ -2.15
RBM39-231ENST00000477334 RIMBP3BA6NNM3 1639 aa1.62□□□□□ -2.15
RBM39-231ENST00000477334 RIMBP3Q9UFD9 1639 aa1.62□□□□□ -2.15
RBM39-231ENST00000477334 COL5A3P25940 1745 aaPredicted RBP1.61□□□□□ -2.15
RBM39-231ENST00000477334 SORL1Q92673 2214 aa1.61□□□□□ -2.15
RBM39-231ENST00000477334 TRAV1-1A0A0B4J248 108 aa1.61□□□□□ -2.15
RBM39-231ENST00000477334 TRAV5A0A0B4J249 113 aa1.61□□□□□ -2.15
RBM39-231ENST00000477334 A0A0G2JQZ4 141 aa1.61□□□□□ -2.15
RBM39-231ENST00000477334 A8MWV9 139 aa1.61□□□□□ -2.15
RBM39-231ENST00000477334 GADD45GO95257 159 aa1.61□□□□□ -2.15
RBM39-231ENST00000477334 DHFRP00374 187 aa1.61□□□□□ -2.15
RBM39-231ENST00000477334 ASAH2BP0C7U1 165 aa1.61□□□□□ -2.15
RBM39-231ENST00000477334 ZNF705BP0CI00 300 aaPredicted RBP1.61□□□□□ -2.15
RBM39-231ENST00000477334 FABP2P12104 132 aa1.61□□□□□ -2.15
RBM39-231ENST00000477334 HLA-EP13747 358 aa1.61□□□□□ -2.15
RBM39-231ENST00000477334 S100A11P31949 105 aa1.61□□□□□ -2.15
RBM39-231ENST00000477334 SDC2P34741 201 aa1.61□□□□□ -2.15
RBM39-231ENST00000477334 RPL35P42766 123 aaKnown RBP1.61□□□□□ -2.15
RBM39-231ENST00000477334 POLR2HP52434 150 aaKnown RBP1.61□□□□□ -2.15
RBM39-231ENST00000477334 ARPP19P56211 112 aa1.61□□□□□ -2.15
RBM39-231ENST00000477334 MSMO1Q15800 293 aa1.61□□□□□ -2.15
RBM39-231ENST00000477334 ESRGQ1W209 222 aa1.61□□□□□ -2.15
RBM39-231ENST00000477334 Q6ZQT0 140 aa1.61□□□□□ -2.15
RBM39-231ENST00000477334 ZNF826PQ6ZT77 177 aa1.61□□□□□ -2.15
RBM39-231ENST00000477334 RPS19BP1Q86WX3 136 aaKnown RBP1.61□□□□□ -2.15
RBM39-231ENST00000477334 OR4K15Q8NH41 348 aa1.61□□□□□ -2.15
RBM39-231ENST00000477334 MAFIPQ8WZ33 124 aa1.61□□□□□ -2.15
RBM39-231ENST00000477334 SLC50A1Q9BRV3 221 aa1.61□□□□□ -2.15
RBM39-231ENST00000477334 C14orf132Q9NPU4 83 aa1.61□□□□□ -2.15
RBM39-231ENST00000477334 GSKIPQ9P0R6 139 aa1.61□□□□□ -2.15
RBM39-231ENST00000477334 CRCT1Q9UGL9 99 aa1.61□□□□□ -2.15
RBM39-231ENST00000477334 TRAPPC2LQ9UL33 140 aa1.61□□□□□ -2.15
RBM39-231ENST00000477334 MED31Q9Y3C7 131 aa1.61□□□□□ -2.15
RBM39-231ENST00000477334 CEP164Q9UPV0 1460 aa1.61□□□□□ -2.15
RBM39-231ENST00000477334 COL11A1P12107 1806 aaPredicted RBP1.61□□□□□ -2.15
RBM39-231ENST00000477334 DOCK3Q8IZD9 2030 aa1.61□□□□□ -2.15
RBM39-231ENST00000477334 CUL9Q8IWT3 2517 aa1.6□□□□□ -2.15
RBM39-231ENST00000477334 TRAV3A0A0B4J244 114 aa1.6□□□□□ -2.15
RBM39-231ENST00000477334 ZNF705FA8MVS1 300 aaPredicted RBP1.6□□□□□ -2.15
RBM39-231ENST00000477334 MT-ND6P03923 174 aa1.6□□□□□ -2.15
RBM39-231ENST00000477334 CTSDP07339 412 aaPredicted RBP1.6□□□□□ -2.15
RBM39-231ENST00000477334 BAALC-AS2P0C853 105 aa1.6□□□□□ -2.15
RBM39-231ENST00000477334 P0DMU3 169 aa1.6□□□□□ -2.15
RBM39-231ENST00000477334 FAM231AP0DMU4 169 aa1.6□□□□□ -2.15
RBM39-231ENST00000477334 FAM231CP0DMU5 169 aa1.6□□□□□ -2.15
RBM39-231ENST00000477334 HBBP68871 147 aa1.6□□□□□ -2.15
RBM39-231ENST00000477334 EIF3IQ13347 325 aaKnown RBP1.6□□□□□ -2.15
RBM39-231ENST00000477334 PRR15Q8IV56 129 aa1.6□□□□□ -2.15
RBM39-231ENST00000477334 TTTY12Q9BZ98 90 aa1.6□□□□□ -2.15
RBM39-231ENST00000477334 TMEM126AQ9H061 195 aa1.6□□□□□ -2.15
RBM39-231ENST00000477334 TMEM106BQ9NUM4 274 aa1.6□□□□□ -2.15
RBM39-231ENST00000477334 NAT8BQ9UHF3 227 aa1.6□□□□□ -2.15
RBM39-231ENST00000477334 PXDNLA1KZ92 1463 aa1.6□□□□□ -2.15
RBM39-231ENST00000477334 ADGBQ8N7X0 1667 aa1.6□□□□□ -2.15
RBM39-231ENST00000477334 ARHGEF10O15013 1369 aa1.59□□□□□ -2.15
RBM39-231ENST00000477334 ICE1Q9Y2F5 2266 aa1.59□□□□□ -2.15
RBM39-231ENST00000477334 PIK3C2AO00443 1686 aa1.59□□□□□ -2.15
RBM39-231ENST00000477334 K7ERJ3 54 aa1.59□□□□□ -2.15
RBM39-231ENST00000477334 DEGS1O15121 323 aa1.59□□□□□ -2.15
RBM39-231ENST00000477334 RER1O15258 196 aa1.59□□□□□ -2.15
RBM39-231ENST00000477334 RPL7P18124 248 aaKnown RBP1.59□□□□□ -2.15
RBM39-231ENST00000477334 AKR1C3P42330 323 aa1.59□□□□□ -2.15
RBM39-231ENST00000477334 KLRD1Q13241 179 aa1.59□□□□□ -2.15
RBM39-231ENST00000477334 HES1Q14469 280 aa1.59□□□□□ -2.15
RBM39-231ENST00000477334 RNASE10Q5GAN6 216 aaKnown RBP1.59□□□□□ -2.15
RBM39-231ENST00000477334 HRCT1Q6UXD1 115 aa1.59□□□□□ -2.15
RBM39-231ENST00000477334 C4orf22Q6V702 233 aa1.59□□□□□ -2.15
RBM39-231ENST00000477334 OR8I2Q8N0Y5 310 aa1.59□□□□□ -2.15
RBM39-231ENST00000477334 LXNQ9BS40 222 aa1.59□□□□□ -2.15
RBM39-231ENST00000477334 CACYBPQ9HB71 228 aaKnown RBP1.59□□□□□ -2.15
RBM39-231ENST00000477334 TMEM138Q9NPI0 162 aa1.59□□□□□ -2.15
RBM39-231ENST00000477334 TAS2R7Q9NYW3 318 aa1.59□□□□□ -2.15
RBM39-231ENST00000477334 PLXND1Q9Y4D7 1925 aa1.59□□□□□ -2.15
RBM39-231ENST00000477334 TRPM6Q9BX84 2022 aa1.59□□□□□ -2.16
RBM39-231ENST00000477334 BCL9O00512 1426 aa1.58□□□□□ -2.16
RBM39-231ENST00000477334 TRAPPC8Q9Y2L5 1435 aa1.58□□□□□ -2.16
RBM39-231ENST00000477334 BORCS7-ASMTA0A0B4J1R7 106 aa1.58□□□□□ -2.16
RBM39-231ENST00000477334 IBA57-AS1B1ANH7 110 aa1.58□□□□□ -2.16
RBM39-231ENST00000477334 KPNA4O00629 521 aaPredicted RBP1.58□□□□□ -2.16
RBM39-231ENST00000477334 ARPC5O15511 151 aa1.58□□□□□ -2.16
RBM39-231ENST00000477334 LYZL6O75951 148 aa1.58□□□□□ -2.16
RBM39-231ENST00000477334 UBL3O95164 117 aa1.58□□□□□ -2.16
RBM39-231ENST00000477334 CRPP02741 224 aa1.58□□□□□ -2.16
RBM39-231ENST00000477334 C1QCP02747 245 aa1.58□□□□□ -2.16
RBM39-231ENST00000477334 DBIP07108 87 aaKnown RBP1.58□□□□□ -2.16
RBM39-231ENST00000477334 GPX2P18283 190 aa1.58□□□□□ -2.16
RBM39-231ENST00000477334 CMPK1P30085 196 aa1.58□□□□□ -2.16
RBM39-231ENST00000477334 DEFB103AP81534 67 aa1.58□□□□□ -2.16
RBM39-231ENST00000477334 OR8B8Q15620 311 aa1.58□□□□□ -2.16
RBM39-231ENST00000477334 VMA21Q3ZAQ7 101 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms