RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 SLC25A39Q9BZJ4 359 aaPredicted RBP11.18□□□□□ -0.62
COL4A6-206ENST00000477085 MANBALQ9NQG1 85 aa11.18□□□□□ -0.62
COL4A6-206ENST00000477085 SERTAD4Q9NUC0 356 aa11.18□□□□□ -0.62
COL4A6-206ENST00000477085 TMA7Q9Y2S6 64 aaKnown RBP11.18□□□□□ -0.62
COL4A6-206ENST00000477085 PUS1Q9Y606 427 aaKnown RBP eCLIP11.18□□□□□ -0.62
COL4A6-206ENST00000477085 HIVEP1P15822 2718 aa11.18□□□□□ -0.62
COL4A6-206ENST00000477085 FAM181BA6NEQ2 426 aa11.17□□□□□ -0.62
COL4A6-206ENST00000477085 NUPL2O15504 423 aaKnown RBP11.17□□□□□ -0.62
COL4A6-206ENST00000477085 OR7C2O60412 319 aa11.17□□□□□ -0.62
COL4A6-206ENST00000477085 FABP1P07148 127 aa11.17□□□□□ -0.62
COL4A6-206ENST00000477085 SNRPCP09234 159 aaKnown RBP11.17□□□□□ -0.62
COL4A6-206ENST00000477085 ATP5G3P48201 142 aa11.17□□□□□ -0.62
COL4A6-206ENST00000477085 MEF2BQ02080 365 aaPredicted RBP11.17□□□□□ -0.62
COL4A6-206ENST00000477085 HIGD1AQ9Y241 93 aa11.17□□□□□ -0.62
COL4A6-206ENST00000477085 IGHV3OR16-8A0A075B7F1 116 aa11.16□□□□□ -0.62
COL4A6-206ENST00000477085 TGOLN2O43493 480 aa11.16□□□□□ -0.62
COL4A6-206ENST00000477085 IFNA1P01562 189 aa11.16□□□□□ -0.62
COL4A6-206ENST00000477085 IGHV3-11P01762 117 aa11.16□□□□□ -0.62
COL4A6-206ENST00000477085 NPPCP23582 126 aa11.16□□□□□ -0.62
COL4A6-206ENST00000477085 TAS2R45P59539 299 aa11.16□□□□□ -0.62
COL4A6-206ENST00000477085 PQLC2Q6ZP29 291 aa11.16□□□□□ -0.62
COL4A6-206ENST00000477085 FXYD5Q96DB9 178 aa11.16□□□□□ -0.62
COL4A6-206ENST00000477085 USMG5Q96IX5 58 aa11.16□□□□□ -0.62
COL4A6-206ENST00000477085 ZFAND3Q9H8U3 227 aa11.16□□□□□ -0.62
COL4A6-206ENST00000477085 NF1P21359 2839 aa11.16□□□□□ -0.62
COL4A6-206ENST00000477085 FAM74A7A6NL05 159 aa11.16□□□□□ -0.62
COL4A6-206ENST00000477085 FAM90A2PQ658T7 463 aa11.16□□□□□ -0.62
COL4A6-206ENST00000477085 TOMM20LQ6UXN7 152 aa11.16□□□□□ -0.62
COL4A6-206ENST00000477085 SHANK2-AS3Q9BTD1 123 aa11.16□□□□□ -0.62
COL4A6-206ENST00000477085 OR51M1Q9H341 326 aa11.16□□□□□ -0.62
COL4A6-206ENST00000477085 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.15□□□□□ -0.62
COL4A6-206ENST00000477085 C11orf94C9JXX5 98 aa11.15□□□□□ -0.62
COL4A6-206ENST00000477085 H3BRN7 92 aa11.15□□□□□ -0.62
COL4A6-206ENST00000477085 CD99P14209 185 aa11.15□□□□□ -0.62
COL4A6-206ENST00000477085 GP9P14770 177 aa11.15□□□□□ -0.62
COL4A6-206ENST00000477085 SRD5A1P18405 259 aa11.15□□□□□ -0.62
COL4A6-206ENST00000477085 CEBPGP53567 150 aa11.15□□□□□ -0.62
COL4A6-206ENST00000477085 BTN1A1Q13410 526 aa11.15□□□□□ -0.62
COL4A6-206ENST00000477085 ZNF343Q6P1L6 599 aa11.15□□□□□ -0.62
COL4A6-206ENST00000477085 ZNF600Q6ZNG1 722 aa11.15□□□□□ -0.62
COL4A6-206ENST00000477085 Q6ZSV7 163 aa11.15□□□□□ -0.62
COL4A6-206ENST00000477085 PAXXQ9BUH6 204 aa11.15□□□□□ -0.62
COL4A6-206ENST00000477085 CLPSL1A2RUU4 121 aa11.14□□□□□ -0.63
COL4A6-206ENST00000477085 CLDN34H7C241 214 aa11.14□□□□□ -0.63
COL4A6-206ENST00000477085 CST9LP1Q5W188 147 aa11.14□□□□□ -0.63
COL4A6-206ENST00000477085 SVBPQ8N300 66 aa11.14□□□□□ -0.63
COL4A6-206ENST00000477085 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.14□□□□□ -0.63
COL4A6-206ENST00000477085 OR4F5Q8NH21 305 aa11.14□□□□□ -0.63
COL4A6-206ENST00000477085 OR4F4Q96R69 305 aa11.14□□□□□ -0.63
COL4A6-206ENST00000477085 ATP6V0BQ99437 205 aa11.14□□□□□ -0.63
COL4A6-206ENST00000477085 NKX6-2Q9C056 277 aaPredicted RBP11.14□□□□□ -0.63
COL4A6-206ENST00000477085 GNB4Q9HAV0 340 aa11.14□□□□□ -0.63
COL4A6-206ENST00000477085 MTORP42345 2549 aa11.14□□□□□ -0.63
COL4A6-206ENST00000477085 RPLP1P05386 114 aaKnown RBP11.13□□□□□ -0.63
COL4A6-206ENST00000477085 SOHLH1Q5JUK2 328 aa11.13□□□□□ -0.63
COL4A6-206ENST00000477085 OR4X2Q8NGF9 303 aa11.13□□□□□ -0.63
COL4A6-206ENST00000477085 TMEM167BQ9NRX6 74 aa11.13□□□□□ -0.63
COL4A6-206ENST00000477085 GAR1Q9NY12 217 aaKnown RBP11.13□□□□□ -0.63
COL4A6-206ENST00000477085 TMEM89A2RUT3 159 aa11.13□□□□□ -0.63
COL4A6-206ENST00000477085 ZNF98A6NK75 572 aa11.13□□□□□ -0.63
COL4A6-206ENST00000477085 CYSRT1A8MQ03 144 aa11.13□□□□□ -0.63
COL4A6-206ENST00000477085 INAFM1C9JVW0 142 aa11.13□□□□□ -0.63
COL4A6-206ENST00000477085 H3BQ15 152 aa11.13□□□□□ -0.63
COL4A6-206ENST00000477085 MRPS12O15235 138 aaKnown RBP11.13□□□□□ -0.63
COL4A6-206ENST00000477085 TAGLN2P37802 199 aaKnown RBP11.13□□□□□ -0.63
COL4A6-206ENST00000477085 UBE2L3P68036 154 aaKnown RBP11.13□□□□□ -0.63
COL4A6-206ENST00000477085 OR5B12Q96R08 314 aa11.13□□□□□ -0.63
COL4A6-206ENST00000477085 CDC42EP3Q9UKI2 254 aa11.13□□□□□ -0.63
COL4A6-206ENST00000477085 GGTLC3B5MD39 225 aa11.12□□□□□ -0.63
COL4A6-206ENST00000477085 H3BTX0 84 aa11.12□□□□□ -0.63
COL4A6-206ENST00000477085 DNASE2O00115 360 aaPredicted RBP11.12□□□□□ -0.63
COL4A6-206ENST00000477085 ARL3P36405 182 aa11.12□□□□□ -0.63
COL4A6-206ENST00000477085 TEX38Q6PEX7 206 aa11.12□□□□□ -0.63
COL4A6-206ENST00000477085 MYOZ3Q8TDC0 251 aa11.12□□□□□ -0.63
COL4A6-206ENST00000477085 A0A0G2JLM5 398 aa11.11□□□□□ -0.63
COL4A6-206ENST00000477085 BMPR1BO00238 502 aa11.11□□□□□ -0.63
COL4A6-206ENST00000477085 SCGB2A1O75556 95 aa11.11□□□□□ -0.63
COL4A6-206ENST00000477085 RNASE1P07998 156 aaKnown RBP11.11□□□□□ -0.63
COL4A6-206ENST00000477085 FOSL1P15407 271 aa11.11□□□□□ -0.63
COL4A6-206ENST00000477085 FOXE3Q13461 319 aa11.11□□□□□ -0.63
COL4A6-206ENST00000477085 UNQ9165/PRO28630Q6UXU0 137 aa11.11□□□□□ -0.63
COL4A6-206ENST00000477085 RNF152Q8N8N0 203 aa11.11□□□□□ -0.63
COL4A6-206ENST00000477085 ZNF586Q9NXT0 402 aa11.11□□□□□ -0.63
COL4A6-206ENST00000477085 TMEM14CQ9P0S9 112 aa11.11□□□□□ -0.63
COL4A6-206ENST00000477085 HIVEP2P31629 2446 aa11.11□□□□□ -0.63
COL4A6-206ENST00000477085 TMEM250H0YL14 139 aa11.11□□□□□ -0.63
COL4A6-206ENST00000477085 NDUFS6O75380 124 aaKnown RBP11.11□□□□□ -0.63
COL4A6-206ENST00000477085 APOHP02749 345 aaPredicted RBP11.11□□□□□ -0.63
COL4A6-206ENST00000477085 NBEAP1P0C6P0 100 aa11.11□□□□□ -0.63
COL4A6-206ENST00000477085 HILS1P60008 231 aa11.11□□□□□ -0.63
COL4A6-206ENST00000477085 TCTEX1D4Q5JR98 221 aa11.11□□□□□ -0.63
COL4A6-206ENST00000477085 STXBP6Q8NFX7 210 aa11.11□□□□□ -0.63
COL4A6-206ENST00000477085 C17orf77Q96MU5 243 aa11.11□□□□□ -0.63
COL4A6-206ENST00000477085 RABAC1Q9UI14 185 aa11.11□□□□□ -0.63
COL4A6-206ENST00000477085 SCO2A0A1W2PP80 73 aa11.1□□□□□ -0.63
COL4A6-206ENST00000477085 A0A1W2PRE2 83 aa11.1□□□□□ -0.63
COL4A6-206ENST00000477085 ZNF207O43670 478 aaKnown RBP11.1□□□□□ -0.63
COL4A6-206ENST00000477085 ELANEP08246 267 aa11.1□□□□□ -0.63
COL4A6-206ENST00000477085 MYCNOSP40205 109 aa11.1□□□□□ -0.63
COL4A6-206ENST00000477085 RPL15P61313 204 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms