RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 ATG12O94817 140 aa8.34□□□□□ -1.07
HDAC6-219ENST00000476625 ID1P41134 155 aa8.34□□□□□ -1.07
HDAC6-219ENST00000476625 SUPT4H1P63272 117 aaKnown RBP8.34□□□□□ -1.07
HDAC6-219ENST00000476625 GAMTQ14353 236 aa8.34□□□□□ -1.07
HDAC6-219ENST00000476625 EBLN2Q6P2I7 272 aa8.34□□□□□ -1.07
HDAC6-219ENST00000476625 C15orf53Q8NAA6 179 aa8.34□□□□□ -1.07
HDAC6-219ENST00000476625 OR11H7Q8NGC8 314 aa8.34□□□□□ -1.07
HDAC6-219ENST00000476625 TERB2Q8NHR7 220 aa8.34□□□□□ -1.07
HDAC6-219ENST00000476625 RBPMSQ93062 196 aaKnown RBP8.34□□□□□ -1.07
HDAC6-219ENST00000476625 IGF2BP2-AS1Q96M15 143 aa8.34□□□□□ -1.07
HDAC6-219ENST00000476625 SLC25A39Q9BZJ4 359 aaPredicted RBP8.34□□□□□ -1.07
HDAC6-219ENST00000476625 NAA50Q9GZZ1 169 aaKnown RBP8.34□□□□□ -1.07
HDAC6-219ENST00000476625 SLC25A22Q9H936 323 aa8.34□□□□□ -1.07
HDAC6-219ENST00000476625 DOK5Q9P104 306 aa8.34□□□□□ -1.07
HDAC6-219ENST00000476625 EXTL2Q9UBQ6 330 aa8.34□□□□□ -1.07
HDAC6-219ENST00000476625 MTFP1Q9UDX5 166 aa8.34□□□□□ -1.07
HDAC6-219ENST00000476625 IGKV1OR2-108A0A075B7D4 117 aa8.33□□□□□ -1.08
HDAC6-219ENST00000476625 TRAV8-2A0A0B4J237 113 aa8.33□□□□□ -1.08
HDAC6-219ENST00000476625 A8MTW9 85 aa8.33□□□□□ -1.08
HDAC6-219ENST00000476625 RAB3DO95716 219 aa8.33□□□□□ -1.08
HDAC6-219ENST00000476625 GATA2P23769 480 aaPredicted RBP8.33□□□□□ -1.08
HDAC6-219ENST00000476625 CNN1P51911 297 aaKnown RBP8.33□□□□□ -1.08
HDAC6-219ENST00000476625 KLF9Q13886 244 aaPredicted RBP8.33□□□□□ -1.08
HDAC6-219ENST00000476625 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.33□□□□□ -1.08
HDAC6-219ENST00000476625 TMEM182Q6ZP80 229 aaPredicted RBP8.33□□□□□ -1.08
HDAC6-219ENST00000476625 SSX7Q7RTT5 188 aa8.33□□□□□ -1.08
HDAC6-219ENST00000476625 ZFAND1Q8TCF1 268 aa8.33□□□□□ -1.08
HDAC6-219ENST00000476625 PPP1R14BQ96C90 147 aa8.33□□□□□ -1.08
HDAC6-219ENST00000476625 C16orf92Q96LL3 132 aa8.33□□□□□ -1.08
HDAC6-219ENST00000476625 CLUHP3Q96NS8 147 aa8.33□□□□□ -1.08
HDAC6-219ENST00000476625 FUNDC2Q9BWH2 189 aa8.33□□□□□ -1.08
HDAC6-219ENST00000476625 CRYM-AS1A6NIL9 109 aa8.32□□□□□ -1.08
HDAC6-219ENST00000476625 HTN1P15515 57 aa8.32□□□□□ -1.08
HDAC6-219ENST00000476625 OR8G2PQ6IF36 304 aa8.32□□□□□ -1.08
HDAC6-219ENST00000476625 ETFRF1Q6IPR1 90 aa8.32□□□□□ -1.08
HDAC6-219ENST00000476625 STEAP1BQ6NZ63 245 aa8.32□□□□□ -1.08
HDAC6-219ENST00000476625 FAM219AQ8IW50 185 aa8.32□□□□□ -1.08
HDAC6-219ENST00000476625 OR8I2Q8N0Y5 310 aa8.32□□□□□ -1.08
HDAC6-219ENST00000476625 LGI3Q8N145 548 aa8.32□□□□□ -1.08
HDAC6-219ENST00000476625 TMEM229BQ8NBD8 167 aa8.32□□□□□ -1.08
HDAC6-219ENST00000476625 DTD1Q8TEA8 209 aa8.32□□□□□ -1.08
HDAC6-219ENST00000476625 RSG1Q9BU20 258 aa8.32□□□□□ -1.08
HDAC6-219ENST00000476625 A0A0J9YY99 117 aa8.31□□□□□ -1.08
HDAC6-219ENST00000476625 ISLRO14498 428 aa8.31□□□□□ -1.08
HDAC6-219ENST00000476625 SULT1A3P0DMM9 295 aa8.31□□□□□ -1.08
HDAC6-219ENST00000476625 SULT1A4P0DMN0 295 aa8.31□□□□□ -1.08
HDAC6-219ENST00000476625 IAPPP10997 89 aa8.31□□□□□ -1.08
HDAC6-219ENST00000476625 FAM3BP58499 235 aaPredicted RBP8.31□□□□□ -1.08
HDAC6-219ENST00000476625 KIR3DS1Q14943 382 aa8.31□□□□□ -1.08
HDAC6-219ENST00000476625 LYZL2Q7Z4W2 148 aa8.31□□□□□ -1.08
HDAC6-219ENST00000476625 MIXL1Q9H2W2 232 aa8.31□□□□□ -1.08
HDAC6-219ENST00000476625 RPRMQ9NS64 109 aa8.31□□□□□ -1.08
HDAC6-219ENST00000476625 C14orf166Q9Y224 244 aaKnown RBP8.31□□□□□ -1.08
HDAC6-219ENST00000476625 LYRM9A8MSI8 78 aa8.3□□□□□ -1.08
HDAC6-219ENST00000476625 INSP01308 110 aa8.3□□□□□ -1.08
HDAC6-219ENST00000476625 CCL18P55774 89 aa8.3□□□□□ -1.08
HDAC6-219ENST00000476625 TAS2R19P59542 299 aa8.3□□□□□ -1.08
HDAC6-219ENST00000476625 FGL1Q08830 312 aa8.3□□□□□ -1.08
HDAC6-219ENST00000476625 GPR107Q5VW38 600 aa8.3□□□□□ -1.08
HDAC6-219ENST00000476625 OR4C16Q8NGL9 310 aa8.3□□□□□ -1.08
HDAC6-219ENST00000476625 SLC35E1Q96K37 410 aa8.3□□□□□ -1.08
HDAC6-219ENST00000476625 PARD6GQ9BYG4 376 aaPredicted RBP8.3□□□□□ -1.08
HDAC6-219ENST00000476625 MRPS26Q9BYN8 205 aaKnown RBP8.3□□□□□ -1.08
HDAC6-219ENST00000476625 Q9H8V8 135 aa8.3□□□□□ -1.08
HDAC6-219ENST00000476625 HSPB7Q9UBY9 170 aa8.3□□□□□ -1.08
HDAC6-219ENST00000476625 TMEM56-RWDD3S4R434 201 aa8.3□□□□□ -1.08
HDAC6-219ENST00000476625 ATP5G1P05496 136 aa8.29□□□□□ -1.08
HDAC6-219ENST00000476625 HOXA5P20719 270 aa8.29□□□□□ -1.08
HDAC6-219ENST00000476625 ATP5G3P48201 142 aa8.29□□□□□ -1.08
HDAC6-219ENST00000476625 PAIP2BQ9ULR5 123 aaKnown RBP8.29□□□□□ -1.08
HDAC6-219ENST00000476625 GPR132Q9UNW8 380 aa8.29□□□□□ -1.08
HDAC6-219ENST00000476625 ZNF98A6NK75 572 aa8.28□□□□□ -1.08
HDAC6-219ENST00000476625 EPM2AB3EWF7 344 aa8.28□□□□□ -1.08
HDAC6-219ENST00000476625 SNRPCP09234 159 aaKnown RBP8.28□□□□□ -1.08
HDAC6-219ENST00000476625 ALDH3B2P48448 385 aa8.28□□□□□ -1.08
HDAC6-219ENST00000476625 HAMPP81172 84 aa8.28□□□□□ -1.08
HDAC6-219ENST00000476625 CLINT1Q14677 625 aa8.28□□□□□ -1.08
HDAC6-219ENST00000476625 SMCO1Q147U7 214 aa8.28□□□□□ -1.08
HDAC6-219ENST00000476625 ESRGQ1W209 222 aa8.28□□□□□ -1.08
HDAC6-219ENST00000476625 C1orf194Q5T5A4 169 aa8.28□□□□□ -1.08
HDAC6-219ENST00000476625 SPATA31B1PQ5VZV4 182 aa8.28□□□□□ -1.08
HDAC6-219ENST00000476625 OR51S1Q8NGJ8 323 aa8.28□□□□□ -1.08
HDAC6-219ENST00000476625 LINC01587Q99440 93 aa8.28□□□□□ -1.08
HDAC6-219ENST00000476625 NOP10Q9NPE3 64 aaKnown RBP8.28□□□□□ -1.08
HDAC6-219ENST00000476625 ZNF586Q9NXT0 402 aa8.28□□□□□ -1.08
HDAC6-219ENST00000476625 FAT1Q14517 4588 aa8.28□□□□□ -1.08
HDAC6-219ENST00000476625 TRAV26-1A0A087WT03 109 aa8.27□□□□□ -1.09
HDAC6-219ENST00000476625 SNRPGP15A8MWD9 76 aa8.27□□□□□ -1.09
HDAC6-219ENST00000476625 BOLA2-SMG1P6H3BVE0 249 aa8.27□□□□□ -1.09
HDAC6-219ENST00000476625 INAFM2P0DMQ5 153 aa8.27□□□□□ -1.09
HDAC6-219ENST00000476625 ORM2P19652 201 aa8.27□□□□□ -1.09
HDAC6-219ENST00000476625 TBPP20226 339 aa8.27□□□□□ -1.09
HDAC6-219ENST00000476625 NUP62P37198 522 aaPredicted RBP8.27□□□□□ -1.09
HDAC6-219ENST00000476625 HIST1H1AQ02539 215 aaPredicted RBP8.27□□□□□ -1.09
HDAC6-219ENST00000476625 OR5I1Q13606 314 aa8.27□□□□□ -1.09
HDAC6-219ENST00000476625 THAP8Q8NA92 274 aa8.27□□□□□ -1.09
HDAC6-219ENST00000476625 ZNF738Q8NE65 137 aa8.27□□□□□ -1.09
HDAC6-219ENST00000476625 TRGV9Q99603 122 aa8.27□□□□□ -1.09
HDAC6-219ENST00000476625 TNFRSF18Q9Y5U5 241 aa8.27□□□□□ -1.09
HDAC6-219ENST00000476625 U3KQ87 197 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms