RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 PLECQ15149 4684 aaKnown RBP11.89□□□□□ -0.51
COL1A1-205ENST00000476387 L7N2F9 121 aa11.89□□□□□ -0.51
COL1A1-205ENST00000476387 TSC22D2O75157 780 aa11.89□□□□□ -0.51
COL1A1-205ENST00000476387 CA1P00915 261 aaPredicted RBP11.89□□□□□ -0.51
COL1A1-205ENST00000476387 METTL15P1P0C7V9 234 aa11.89□□□□□ -0.51
COL1A1-205ENST00000476387 TAS2R30P59541 319 aa11.89□□□□□ -0.51
COL1A1-205ENST00000476387 VAMP2P63027 116 aa11.89□□□□□ -0.51
COL1A1-205ENST00000476387 PSMG4Q5JS54 123 aa11.89□□□□□ -0.51
COL1A1-205ENST00000476387 TMEM144Q7Z5S9 345 aa11.89□□□□□ -0.51
COL1A1-205ENST00000476387 BATF3Q9NR55 127 aa11.89□□□□□ -0.51
COL1A1-205ENST00000476387 MGAT4CQ9UBM8 478 aa11.89□□□□□ -0.51
COL1A1-205ENST00000476387 MBPP02686 304 aaPredicted RBP11.88□□□□□ -0.51
COL1A1-205ENST00000476387 S100A7P31151 101 aa11.88□□□□□ -0.51
COL1A1-205ENST00000476387 PAX9P55771 341 aa11.88□□□□□ -0.51
COL1A1-205ENST00000476387 RRAS2P62070 204 aaPredicted RBP11.88□□□□□ -0.51
COL1A1-205ENST00000476387 DLK1P80370 383 aa11.88□□□□□ -0.51
COL1A1-205ENST00000476387 EWSR1Q01844 656 aaKnown RBP eCLIP11.88□□□□□ -0.51
COL1A1-205ENST00000476387 C1orf194Q5T5A4 169 aa11.88□□□□□ -0.51
COL1A1-205ENST00000476387 TMEM14EPQ6UXP3 125 aa11.88□□□□□ -0.51
COL1A1-205ENST00000476387 OR10P1Q8NGE3 313 aa11.88□□□□□ -0.51
COL1A1-205ENST00000476387 GATAD1Q8WUU5 269 aa11.88□□□□□ -0.51
COL1A1-205ENST00000476387 LINC00476Q8WZB0 136 aa11.88□□□□□ -0.51
COL1A1-205ENST00000476387 LSM5Q9Y4Y9 91 aaKnown RBP11.88□□□□□ -0.51
COL1A1-205ENST00000476387 CCNKO75909 580 aa11.87□□□□□ -0.51
COL1A1-205ENST00000476387 PMS2P11Q13670 270 aa11.87□□□□□ -0.51
COL1A1-205ENST00000476387 CEMP1Q6PRD7 247 aaPredicted RBP11.87□□□□□ -0.51
COL1A1-205ENST00000476387 GSG1LQ6UXU4 331 aa11.87□□□□□ -0.51
COL1A1-205ENST00000476387 OR8I2Q8N0Y5 310 aa11.87□□□□□ -0.51
COL1A1-205ENST00000476387 TMEM147Q9BVK8 224 aa11.87□□□□□ -0.51
COL1A1-205ENST00000476387 SEPSECSQ9HD40 501 aaKnown RBP11.87□□□□□ -0.51
COL1A1-205ENST00000476387 SLC45A2Q9UMX9 530 aa11.87□□□□□ -0.51
COL1A1-205ENST00000476387 C7orf66A4D0T2 115 aa11.86□□□□□ -0.51
COL1A1-205ENST00000476387 KNCNA6PVL3 124 aa11.86□□□□□ -0.51
COL1A1-205ENST00000476387 PMS2P5A8MQ11 134 aa11.86□□□□□ -0.51
COL1A1-205ENST00000476387 FNDC10F2Z333 226 aa11.86□□□□□ -0.51
COL1A1-205ENST00000476387 IL5P05113 134 aa11.86□□□□□ -0.51
COL1A1-205ENST00000476387 ORM2P19652 201 aa11.86□□□□□ -0.51
COL1A1-205ENST00000476387 GATA2P23769 480 aaPredicted RBP11.86□□□□□ -0.51
COL1A1-205ENST00000476387 ACTL10Q5JWF8 245 aa11.86□□□□□ -0.51
COL1A1-205ENST00000476387 CYP2G1PQ6ZSU1 146 aa11.86□□□□□ -0.51
COL1A1-205ENST00000476387 TRPT1Q86TN4 253 aaKnown RBP11.86□□□□□ -0.51
COL1A1-205ENST00000476387 C2orf50Q96LR7 162 aa11.86□□□□□ -0.51
COL1A1-205ENST00000476387 GPN1Q9HCN4 374 aaPredicted RBP11.86□□□□□ -0.51
COL1A1-205ENST00000476387 K7EPK0 472 aa11.85□□□□□ -0.51
COL1A1-205ENST00000476387 SPP1P10451 314 aa11.85□□□□□ -0.51
COL1A1-205ENST00000476387 PVALBP20472 110 aaPredicted RBP11.85□□□□□ -0.51
COL1A1-205ENST00000476387 BCAP31P51572 246 aa11.85□□□□□ -0.51
COL1A1-205ENST00000476387 DEFA1P59665 94 aa11.85□□□□□ -0.51
COL1A1-205ENST00000476387 DEFA3P59666 94 aa11.85□□□□□ -0.51
COL1A1-205ENST00000476387 S100A10P60903 97 aa11.85□□□□□ -0.51
COL1A1-205ENST00000476387 SELENOTP62341 195 aa11.85□□□□□ -0.51
COL1A1-205ENST00000476387 TMEM41BQ5BJD5 291 aa11.85□□□□□ -0.51
COL1A1-205ENST00000476387 MORN3Q6PF18 240 aaPredicted RBP11.85□□□□□ -0.51
COL1A1-205ENST00000476387 OR1B1Q8NGR6 318 aa11.85□□□□□ -0.51
COL1A1-205ENST00000476387 RARRES2Q99969 163 aa11.85□□□□□ -0.51
COL1A1-205ENST00000476387 SLC25A22Q9H936 323 aa11.85□□□□□ -0.51
COL1A1-205ENST00000476387 NPVFQ9HCQ7 196 aa11.85□□□□□ -0.51
COL1A1-205ENST00000476387 KLK5Q9Y337 293 aaPredicted RBP11.85□□□□□ -0.51
COL1A1-205ENST00000476387 ID1P41134 155 aa11.84□□□□□ -0.51
COL1A1-205ENST00000476387 GALR1P47211 349 aa11.84□□□□□ -0.51
COL1A1-205ENST00000476387 CAV2P51636 162 aa11.84□□□□□ -0.51
COL1A1-205ENST00000476387 RAP2BP61225 183 aa11.84□□□□□ -0.51
COL1A1-205ENST00000476387 SAMD13Q5VXD3 122 aa11.84□□□□□ -0.51
COL1A1-205ENST00000476387 TEPPQ6URK8 271 aa11.84□□□□□ -0.51
COL1A1-205ENST00000476387 DOK5Q9P104 306 aa11.84□□□□□ -0.51
COL1A1-205ENST00000476387 ZNF98A6NK75 572 aa11.83□□□□□ -0.52
COL1A1-205ENST00000476387 LINC00869P0C866 280 aa11.83□□□□□ -0.52
COL1A1-205ENST00000476387 PSMB3P49720 205 aa11.83□□□□□ -0.52
COL1A1-205ENST00000476387 MEOX2P50222 304 aa11.83□□□□□ -0.52
COL1A1-205ENST00000476387 TMEM182Q6ZP80 229 aaPredicted RBP11.83□□□□□ -0.52
COL1A1-205ENST00000476387 S100A7AQ86SG5 101 aa11.83□□□□□ -0.52
COL1A1-205ENST00000476387 OR11H2Q8NH07 326 aa11.83□□□□□ -0.52
COL1A1-205ENST00000476387 GPR82Q96P67 336 aa11.83□□□□□ -0.52
COL1A1-205ENST00000476387 GGACTQ9BVM4 153 aa11.83□□□□□ -0.52
COL1A1-205ENST00000476387 SLC25A32Q9H2D1 315 aa11.83□□□□□ -0.52
COL1A1-205ENST00000476387 C11orf68Q9H3H3 251 aaKnown RBP11.83□□□□□ -0.52
COL1A1-205ENST00000476387 HIGD1AQ9Y241 93 aa11.83□□□□□ -0.52
COL1A1-205ENST00000476387 PRAF2O60831 178 aa11.82□□□□□ -0.52
COL1A1-205ENST00000476387 HYPMO75409 117 aa11.82□□□□□ -0.52
COL1A1-205ENST00000476387 LY6G6CO95867 125 aa11.82□□□□□ -0.52
COL1A1-205ENST00000476387 IFITM3Q01628 133 aa11.82□□□□□ -0.52
COL1A1-205ENST00000476387 SLC38A11Q08AI6 406 aa11.82□□□□□ -0.52
COL1A1-205ENST00000476387 NRARPQ7Z6K4 114 aa11.82□□□□□ -0.52
COL1A1-205ENST00000476387 ZNF546Q86UE3 836 aa11.82□□□□□ -0.52
COL1A1-205ENST00000476387 LINC00052Q96N35 136 aa11.82□□□□□ -0.52
COL1A1-205ENST00000476387 INMT-MINDY4F8WBC2 141 aa11.81□□□□□ -0.52
COL1A1-205ENST00000476387 ISLRO14498 428 aa11.81□□□□□ -0.52
COL1A1-205ENST00000476387 GOSR2O14653 212 aa11.81□□□□□ -0.52
COL1A1-205ENST00000476387 DEDDO75618 318 aa11.81□□□□□ -0.52
COL1A1-205ENST00000476387 OR5G3P0C626 314 aa11.81□□□□□ -0.52
COL1A1-205ENST00000476387 C4BPBP20851 252 aa11.81□□□□□ -0.52
COL1A1-205ENST00000476387 NUTF2P61970 127 aaKnown RBP11.81□□□□□ -0.52
COL1A1-205ENST00000476387 ARL16Q0P5N6 197 aa11.81□□□□□ -0.52
COL1A1-205ENST00000476387 RAB32Q13637 225 aa11.81□□□□□ -0.52
COL1A1-205ENST00000476387 C16orf92Q96LL3 132 aa11.81□□□□□ -0.52
COL1A1-205ENST00000476387 SCRT1Q9BWW7 348 aa11.81□□□□□ -0.52
COL1A1-205ENST00000476387 H3BRN7 92 aa11.8□□□□□ -0.52
COL1A1-205ENST00000476387 CST7O76096 145 aa11.8□□□□□ -0.52
COL1A1-205ENST00000476387 HLA-DRB4P13762 266 aa11.8□□□□□ -0.52
COL1A1-205ENST00000476387 PLP1P60201 277 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms