RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 CORTO00230 105 aa13.19□□□□□ -0.3
TVP23B-202ENST00000476139 HYPMO75409 117 aa13.19□□□□□ -0.3
TVP23B-202ENST00000476139 IGLC1P0CG04 106 aa13.19□□□□□ -0.3
TVP23B-202ENST00000476139 GNLYP22749 145 aa13.19□□□□□ -0.3
TVP23B-202ENST00000476139 CACNA1BQ00975 2339 aa13.19□□□□□ -0.3
TVP23B-202ENST00000476139 PERPQ96FX8 193 aa13.19□□□□□ -0.3
TVP23B-202ENST00000476139 TMEM136Q6ZRR5 245 aa13.18□□□□□ -0.3
TVP23B-202ENST00000476139 OSTCQ9NRP0 149 aa13.18□□□□□ -0.3
TVP23B-202ENST00000476139 PAM16Q9Y3D7 125 aa13.18□□□□□ -0.3
TVP23B-202ENST00000476139 PMCHP20382 165 aa13.18□□□□□ -0.3
TVP23B-202ENST00000476139 ITLN2Q8WWU7 325 aaPredicted RBP13.18□□□□□ -0.3
TVP23B-202ENST00000476139 TOX4O94842 621 aa13.17□□□□□ -0.3
TVP23B-202ENST00000476139 NBEAP1P0C6P0 100 aa13.17□□□□□ -0.3
TVP23B-202ENST00000476139 SRIP30626 198 aa13.17□□□□□ -0.3
TVP23B-202ENST00000476139 CEACAM3P40198 252 aa13.17□□□□□ -0.3
TVP23B-202ENST00000476139 KRTDAPP60985 99 aa13.17□□□□□ -0.3
TVP23B-202ENST00000476139 LYZP61626 148 aa13.17□□□□□ -0.3
TVP23B-202ENST00000476139 CDC42EP3Q9UKI2 254 aa13.17□□□□□ -0.3
TVP23B-202ENST00000476139 PGPA6NDG6 321 aa13.17□□□□□ -0.3
TVP23B-202ENST00000476139 ZNF253O75346 499 aa13.17□□□□□ -0.3
TVP23B-202ENST00000476139 MYCNOSP40205 109 aa13.17□□□□□ -0.3
TVP23B-202ENST00000476139 FAM19A2Q8N3H0 131 aa13.17□□□□□ -0.3
TVP23B-202ENST00000476139 GNB1LQ9BYB4 327 aa13.17□□□□□ -0.3
TVP23B-202ENST00000476139 NCBP2LA6PVI3 153 aaKnown RBP13.17□□□□□ -0.3
TVP23B-202ENST00000476139 K7EIM0 57 aa13.17□□□□□ -0.3
TVP23B-202ENST00000476139 PEX7O00628 323 aa13.17□□□□□ -0.3
TVP23B-202ENST00000476139 IGKV1-17P01599 117 aa13.16□□□□□ -0.3
TVP23B-202ENST00000476139 ZNF705AQ6ZN79 300 aaPredicted RBP13.16□□□□□ -0.3
TVP23B-202ENST00000476139 NPBQ8NG41 125 aa13.16□□□□□ -0.3
TVP23B-202ENST00000476139 RASL11BQ9BPW5 248 aa13.16□□□□□ -0.3
TVP23B-202ENST00000476139 TRAV9-1A0A075B6T8 112 aa13.15□□□□□ -0.3
TVP23B-202ENST00000476139 BMPR1BO00238 502 aa13.15□□□□□ -0.3
TVP23B-202ENST00000476139 SLC25A5P05141 298 aaKnown RBP13.15□□□□□ -0.3
TVP23B-202ENST00000476139 C1orf194Q5T5A4 169 aa13.15□□□□□ -0.3
TVP23B-202ENST00000476139 NUDT10Q8NFP7 164 aa13.15□□□□□ -0.3
TVP23B-202ENST00000476139 NUDT11Q96G61 164 aa13.15□□□□□ -0.3
TVP23B-202ENST00000476139 SSBP4Q9BWG4 385 aaPredicted RBP13.15□□□□□ -0.3
TVP23B-202ENST00000476139 SNHG12Q9BXW3 62 aa13.15□□□□□ -0.3
TVP23B-202ENST00000476139 FBXL7Q9UJT9 491 aa13.15□□□□□ -0.3
TVP23B-202ENST00000476139 CSMD2Q7Z408 3487 aa13.15□□□□□ -0.3
TVP23B-202ENST00000476139 NDUFA3O95167 84 aa13.15□□□□□ -0.3
TVP23B-202ENST00000476139 GP9P14770 177 aa13.15□□□□□ -0.3
TVP23B-202ENST00000476139 AMTP48728 403 aa13.15□□□□□ -0.3
TVP23B-202ENST00000476139 CAMPP49913 170 aa13.15□□□□□ -0.3
TVP23B-202ENST00000476139 SLAQ13239 276 aa13.15□□□□□ -0.3
TVP23B-202ENST00000476139 C5orf64Q2M2E5 130 aa13.15□□□□□ -0.3
TVP23B-202ENST00000476139 SIGLECL1Q8N7X8 197 aa13.15□□□□□ -0.3
TVP23B-202ENST00000476139 EPDR1Q9UM22 224 aa13.15□□□□□ -0.3
TVP23B-202ENST00000476139 HOXB4P17483 251 aaPredicted RBP13.14□□□□□ -0.31
TVP23B-202ENST00000476139 NTF3P20783 257 aa13.14□□□□□ -0.31
TVP23B-202ENST00000476139 TAS2R60P59551 318 aa13.14□□□□□ -0.31
TVP23B-202ENST00000476139 PAFAH1B2P68402 229 aa13.14□□□□□ -0.31
TVP23B-202ENST00000476139 NDPQ00604 133 aa13.14□□□□□ -0.31
TVP23B-202ENST00000476139 CRYBG3Q68DQ2 2970 aa13.14□□□□□ -0.31
TVP23B-202ENST00000476139 STXBP6Q8NFX7 210 aa13.14□□□□□ -0.31
TVP23B-202ENST00000476139 TBL2Q9Y4P3 447 aaKnown RBP13.14□□□□□ -0.31
TVP23B-202ENST00000476139 SMIM27A0A1W2PRY6 76 aa13.14□□□□□ -0.31
TVP23B-202ENST00000476139 A6NNC1 897 aa13.14□□□□□ -0.31
TVP23B-202ENST00000476139 SFTPCP11686 197 aa13.14□□□□□ -0.31
TVP23B-202ENST00000476139 PLP1P60201 277 aa13.14□□□□□ -0.31
TVP23B-202ENST00000476139 PAX2Q02962 417 aa13.14□□□□□ -0.31
TVP23B-202ENST00000476139 SLC25A39Q9BZJ4 359 aaPredicted RBP13.14□□□□□ -0.31
TVP23B-202ENST00000476139 HIGD1AQ9Y241 93 aa13.14□□□□□ -0.31
TVP23B-202ENST00000476139 AMY1AP04745 511 aa13.13□□□□□ -0.31
TVP23B-202ENST00000476139 KIR3DL3Q8N743 410 aa13.13□□□□□ -0.31
TVP23B-202ENST00000476139 TMEM68Q96MH6 324 aa13.13□□□□□ -0.31
TVP23B-202ENST00000476139 ASCL2Q99929 193 aa13.13□□□□□ -0.31
TVP23B-202ENST00000476139 ZNF331Q9NQX6 463 aaPredicted RBP13.13□□□□□ -0.31
TVP23B-202ENST00000476139 FLNCQ14315 2725 aa13.13□□□□□ -0.31
TVP23B-202ENST00000476139 CELSR2Q9HCU4 2923 aa13.13□□□□□ -0.31
TVP23B-202ENST00000476139 GPX1P07203 203 aa13.13□□□□□ -0.31
TVP23B-202ENST00000476139 Q0VG73 95 aa13.13□□□□□ -0.31
TVP23B-202ENST00000476139 GDF5OSQ5U4N7 250 aa13.13□□□□□ -0.31
TVP23B-202ENST00000476139 BCL6BQ8N143 479 aaPredicted RBP13.13□□□□□ -0.31
TVP23B-202ENST00000476139 RBM14Q96PK6 669 aaKnown RBP13.13□□□□□ -0.31
TVP23B-202ENST00000476139 BPESC1Q9GZL8 116 aa13.13□□□□□ -0.31
TVP23B-202ENST00000476139 A0A1W2PS18 150 aa13.12□□□□□ -0.31
TVP23B-202ENST00000476139 APCSP02743 223 aa13.12□□□□□ -0.31
TVP23B-202ENST00000476139 BRS3P32247 399 aa13.12□□□□□ -0.31
TVP23B-202ENST00000476139 UBE2G1P62253 170 aa13.12□□□□□ -0.31
TVP23B-202ENST00000476139 C1orf122Q6ZSJ8 110 aa13.12□□□□□ -0.31
TVP23B-202ENST00000476139 C2orf88Q9BSF0 95 aa13.12□□□□□ -0.31
TVP23B-202ENST00000476139 WDR73Q6P4I2 378 aa13.12□□□□□ -0.31
TVP23B-202ENST00000476139 Q71RC1 249 aaPredicted RBP13.12□□□□□ -0.31
TVP23B-202ENST00000476139 NUP35Q8NFH5 326 aa13.12□□□□□ -0.31
TVP23B-202ENST00000476139 IZUMO1RA6ND01 250 aa13.11□□□□□ -0.31
TVP23B-202ENST00000476139 EFNA4P52798 201 aa13.11□□□□□ -0.31
TVP23B-202ENST00000476139 LINC00322Q6ZN03 302 aaPredicted RBP13.11□□□□□ -0.31
TVP23B-202ENST00000476139 TCF24Q7RTU0 167 aa13.11□□□□□ -0.31
TVP23B-202ENST00000476139 C17orf77Q96MU5 243 aa13.11□□□□□ -0.31
TVP23B-202ENST00000476139 FANCD2OSQ96PS1 177 aa13.11□□□□□ -0.31
TVP23B-202ENST00000476139 SIRPDQ9H106 197 aa13.11□□□□□ -0.31
TVP23B-202ENST00000476139 Q9H3A6 140 aa13.11□□□□□ -0.31
TVP23B-202ENST00000476139 LPAR2Q9HBW0 351 aa13.11□□□□□ -0.31
TVP23B-202ENST00000476139 NRN1Q9NPD7 142 aa13.11□□□□□ -0.31
TVP23B-202ENST00000476139 ZNF586Q9NXT0 402 aa13.11□□□□□ -0.31
TVP23B-202ENST00000476139 ZNF562Q6V9R5 426 aa13.11□□□□□ -0.31
TVP23B-202ENST00000476139 EXOC3-AS1Q8N2X6 119 aa13.11□□□□□ -0.31
TVP23B-202ENST00000476139 MRPL27Q9P0M9 148 aaKnown RBP13.11□□□□□ -0.31
TVP23B-202ENST00000476139 UTP20O75691 2785 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms