RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 ATP6V1FQ16864 119 aa3.32□□□□□ -1.88
VPS13D-206ENST00000476045 TMEM241Q24JQ0 296 aa3.32□□□□□ -1.88
VPS13D-206ENST00000476045 PYY3Q5JQD4 70 aa3.32□□□□□ -1.88
VPS13D-206ENST00000476045 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.32□□□□□ -1.88
VPS13D-206ENST00000476045 TPTE2P1Q5T6R2 138 aa3.32□□□□□ -1.88
VPS13D-206ENST00000476045 TRAT1Q6PIZ9 186 aa3.32□□□□□ -1.88
VPS13D-206ENST00000476045 SSX9Q7RTT3 188 aa3.32□□□□□ -1.88
VPS13D-206ENST00000476045 LHFPL4Q7Z7J7 247 aa3.32□□□□□ -1.88
VPS13D-206ENST00000476045 TMEM219Q86XT9 240 aa3.32□□□□□ -1.88
VPS13D-206ENST00000476045 HIST3H2BBQ8N257 126 aa3.32□□□□□ -1.88
VPS13D-206ENST00000476045 ABHD12Q8N2K0 398 aa3.32□□□□□ -1.88
VPS13D-206ENST00000476045 ZNF709Q8N972 641 aa3.32□□□□□ -1.88
VPS13D-206ENST00000476045 C8orf31Q8N9H6 132 aa3.32□□□□□ -1.88
VPS13D-206ENST00000476045 OR10P1Q8NGE3 313 aa3.32□□□□□ -1.88
VPS13D-206ENST00000476045 OR9G1Q8NH87 305 aa3.32□□□□□ -1.88
VPS13D-206ENST00000476045 PIFOQ8TCI5 191 aa3.32□□□□□ -1.88
VPS13D-206ENST00000476045 DDB2Q92466 427 aa3.32□□□□□ -1.88
VPS13D-206ENST00000476045 HIST1H2BHQ93079 126 aa3.32□□□□□ -1.88
VPS13D-206ENST00000476045 PINX1Q96BK5 328 aaKnown RBP3.32□□□□□ -1.88
VPS13D-206ENST00000476045 RBM14Q96PK6 669 aaKnown RBP3.32□□□□□ -1.88
VPS13D-206ENST00000476045 OR5B12Q96R08 314 aa3.32□□□□□ -1.88
VPS13D-206ENST00000476045 HIST1H2BNQ99877 126 aa3.32□□□□□ -1.88
VPS13D-206ENST00000476045 HIST1H2BMQ99879 126 aa3.32□□□□□ -1.88
VPS13D-206ENST00000476045 SLC25A33Q9BSK2 321 aa3.32□□□□□ -1.88
VPS13D-206ENST00000476045 MCRIP2Q9BUT9 160 aaKnown RBP3.32□□□□□ -1.88
VPS13D-206ENST00000476045 ELOVL1Q9BW60 279 aa3.32□□□□□ -1.88
VPS13D-206ENST00000476045 QTRT1Q9BXR0 403 aaKnown RBP3.32□□□□□ -1.88
VPS13D-206ENST00000476045 PARD6GQ9BYG4 376 aaPredicted RBP3.32□□□□□ -1.88
VPS13D-206ENST00000476045 PRO1933Q9H354 126 aa3.32□□□□□ -1.88
VPS13D-206ENST00000476045 LINC00574Q9H8X3 128 aa3.32□□□□□ -1.88
VPS13D-206ENST00000476045 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.32□□□□□ -1.88
VPS13D-206ENST00000476045 HSPB7Q9UBY9 170 aa3.32□□□□□ -1.88
VPS13D-206ENST00000476045 NAT8Q9UHE5 227 aa3.32□□□□□ -1.88
VPS13D-206ENST00000476045 TIMM9Q9Y5J7 89 aa3.32□□□□□ -1.88
VPS13D-206ENST00000476045 TRAV3A0A0B4J244 114 aa3.31□□□□□ -1.88
VPS13D-206ENST00000476045 KBTBD11-OT1A0A1B0GTJ5 212 aa3.31□□□□□ -1.88
VPS13D-206ENST00000476045 C15orf62A8K5M9 175 aa3.31□□□□□ -1.88
VPS13D-206ENST00000476045 PMS2P5A8MQ11 134 aa3.31□□□□□ -1.88
VPS13D-206ENST00000476045 FAM90A26D6RGX4 464 aa3.31□□□□□ -1.88
VPS13D-206ENST00000476045 G3V4G9 280 aa3.31□□□□□ -1.88
VPS13D-206ENST00000476045 BUB1B-PAK6H3BSN5 160 aa3.31□□□□□ -1.88
VPS13D-206ENST00000476045 SPINT2O43291 252 aa3.31□□□□□ -1.88
VPS13D-206ENST00000476045 TGOLN2O43493 480 aa3.31□□□□□ -1.88
VPS13D-206ENST00000476045 SOX15O60248 233 aa3.31□□□□□ -1.88
VPS13D-206ENST00000476045 FCGR3BO75015 233 aa3.31□□□□□ -1.88
VPS13D-206ENST00000476045 IFNA10P01566 189 aa3.31□□□□□ -1.88
VPS13D-206ENST00000476045 PFN1P07737 140 aaKnown RBP3.31□□□□□ -1.88
VPS13D-206ENST00000476045 CD28P10747 220 aa3.31□□□□□ -1.88
VPS13D-206ENST00000476045 DEFA4P12838 97 aa3.31□□□□□ -1.88
VPS13D-206ENST00000476045 FABP4P15090 132 aa3.31□□□□□ -1.88
VPS13D-206ENST00000476045 GZMHP20718 246 aa3.31□□□□□ -1.88
VPS13D-206ENST00000476045 NPPCP23582 126 aa3.31□□□□□ -1.88
VPS13D-206ENST00000476045 CHRNA7P36544 502 aa3.31□□□□□ -1.88
VPS13D-206ENST00000476045 GALR1P47211 349 aa3.31□□□□□ -1.88
VPS13D-206ENST00000476045 ATP5G3P48201 142 aa3.31□□□□□ -1.88
VPS13D-206ENST00000476045 UBE2G2P60604 165 aa3.31□□□□□ -1.88
VPS13D-206ENST00000476045 SERF2P84101 59 aa3.31□□□□□ -1.88
VPS13D-206ENST00000476045 PRB3Q04118 309 aaPredicted RBP3.31□□□□□ -1.88
VPS13D-206ENST00000476045 PNRC1Q12796 327 aaPredicted RBP3.31□□□□□ -1.88
VPS13D-206ENST00000476045 BSXQ3C1V8 233 aa3.31□□□□□ -1.88
VPS13D-206ENST00000476045 ACOT6Q3I5F7 207 aaPredicted RBP3.31□□□□□ -1.88
VPS13D-206ENST00000476045 NSUN5P1Q3KNT7 163 aa3.31□□□□□ -1.88
VPS13D-206ENST00000476045 RPL39P5Q59GN2 51 aa3.31□□□□□ -1.88
VPS13D-206ENST00000476045 GCSAMLQ5JQS6 135 aa3.31□□□□□ -1.88
VPS13D-206ENST00000476045 PRAMEF5Q5TYX0 476 aa3.31□□□□□ -1.88
VPS13D-206ENST00000476045 Q6ZWC4 215 aa3.31□□□□□ -1.88
VPS13D-206ENST00000476045 RPP25LQ8N5L8 163 aaKnown RBP3.31□□□□□ -1.88
VPS13D-206ENST00000476045 WFDC9Q8NEX5 89 aa3.31□□□□□ -1.88
VPS13D-206ENST00000476045 OR5AU1Q8NGC0 362 aa3.31□□□□□ -1.88
VPS13D-206ENST00000476045 OR4X1Q8NH49 305 aa3.31□□□□□ -1.88
VPS13D-206ENST00000476045 MRAPQ8TCY5 172 aa3.31□□□□□ -1.88
VPS13D-206ENST00000476045 LEAP2Q969E1 77 aa3.31□□□□□ -1.88
VPS13D-206ENST00000476045 PRR25Q96S07 402 aa3.31□□□□□ -1.88
VPS13D-206ENST00000476045 PFDN5Q99471 154 aa3.31□□□□□ -1.88
VPS13D-206ENST00000476045 P2RX4Q99571 388 aa3.31□□□□□ -1.88
VPS13D-206ENST00000476045 CITED2Q99967 270 aaPredicted RBP3.31□□□□□ -1.88
VPS13D-206ENST00000476045 CTDSP1Q9GZU7 261 aa3.31□□□□□ -1.88
VPS13D-206ENST00000476045 PARLQ9H300 379 aa3.31□□□□□ -1.88
VPS13D-206ENST00000476045 GAR1Q9NY12 217 aaKnown RBP3.31□□□□□ -1.88
VPS13D-206ENST00000476045 CALYQ9NYX4 217 aa3.31□□□□□ -1.88
VPS13D-206ENST00000476045 GNG12Q9UBI6 72 aa3.31□□□□□ -1.88
VPS13D-206ENST00000476045 SIGLEC9Q9Y336 463 aa3.31□□□□□ -1.88
VPS13D-206ENST00000476045 KMT2CQ8NEZ4 4911 aaKnown RBP3.31□□□□□ -1.88
VPS13D-206ENST00000476045 DNAH9Q9NYC9 4486 aa3.3□□□□□ -1.88
VPS13D-206ENST00000476045 A0A1W2PPI3 338 aa3.3□□□□□ -1.88
VPS13D-206ENST00000476045 TCRBV4S1A1TA0A5B7 111 aa3.3□□□□□ -1.88
VPS13D-206ENST00000476045 XKRY2A2RUG3 117 aa3.3□□□□□ -1.88
VPS13D-206ENST00000476045 PSMB11A5LHX3 300 aa3.3□□□□□ -1.88
VPS13D-206ENST00000476045 NPIPB5A8MRT5 1133 aa3.3□□□□□ -1.88
VPS13D-206ENST00000476045 C11orf94C9JXX5 98 aa3.3□□□□□ -1.88
VPS13D-206ENST00000476045 C17orf112F2Z3M2 114 aa3.3□□□□□ -1.88
VPS13D-206ENST00000476045 C15orf65H3BRN8 121 aa3.3□□□□□ -1.88
VPS13D-206ENST00000476045 RRHO14718 337 aa3.3□□□□□ -1.88
VPS13D-206ENST00000476045 SLC31A2O15432 143 aa3.3□□□□□ -1.88
VPS13D-206ENST00000476045 MBP02144 154 aa3.3□□□□□ -1.88
VPS13D-206ENST00000476045 NPSP0C0P6 89 aa3.3□□□□□ -1.88
VPS13D-206ENST00000476045 MYOD1P15172 320 aa3.3□□□□□ -1.88
VPS13D-206ENST00000476045 TMEM11P17152 192 aa3.3□□□□□ -1.88
VPS13D-206ENST00000476045 CDC34P49427 236 aaPredicted RBP3.3□□□□□ -1.88
VPS13D-206ENST00000476045 ZNF137PP52743 207 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms