RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 CFHR3Q02985 330 aa5.46□□□□□ -1.54
SHQ1-207ENST00000475558 FAM106AQ4KMX7 169 aa5.46□□□□□ -1.54
SHQ1-207ENST00000475558 C10orf113Q5VZT2 155 aa5.46□□□□□ -1.54
SHQ1-207ENST00000475558 MIC13Q5XKP0 118 aa5.46□□□□□ -1.54
SHQ1-207ENST00000475558 ZNF343Q6P1L6 599 aa5.46□□□□□ -1.54
SHQ1-207ENST00000475558 RPP25LQ8N5L8 163 aaKnown RBP5.46□□□□□ -1.54
SHQ1-207ENST00000475558 STPG3Q8N7X2 389 aa5.46□□□□□ -1.54
SHQ1-207ENST00000475558 OR4X2Q8NGF9 303 aa5.46□□□□□ -1.54
SHQ1-207ENST00000475558 ZNF502Q8TBZ5 544 aa5.46□□□□□ -1.54
SHQ1-207ENST00000475558 GPR82Q96P67 336 aa5.46□□□□□ -1.54
SHQ1-207ENST00000475558 RSG1Q9BU20 258 aa5.46□□□□□ -1.54
SHQ1-207ENST00000475558 HRH4Q9H3N8 390 aa5.46□□□□□ -1.54
SHQ1-207ENST00000475558 SOX21Q9Y651 276 aaPredicted RBP5.46□□□□□ -1.54
SHQ1-207ENST00000475558 ARL2-SNX15V9GYD0 113 aa5.46□□□□□ -1.54
SHQ1-207ENST00000475558 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.45□□□□□ -1.54
SHQ1-207ENST00000475558 LINC01548A6NM66 108 aa5.45□□□□□ -1.54
SHQ1-207ENST00000475558 K7EMT4 169 aa5.45□□□□□ -1.54
SHQ1-207ENST00000475558 BMPR1BO00238 502 aa5.45□□□□□ -1.54
SHQ1-207ENST00000475558 TGOLN2O43493 480 aa5.45□□□□□ -1.54
SHQ1-207ENST00000475558 GGCTO75223 188 aaKnown RBP5.45□□□□□ -1.54
SHQ1-207ENST00000475558 CTSGP08311 255 aa5.45□□□□□ -1.54
SHQ1-207ENST00000475558 OR5G3P0C626 314 aa5.45□□□□□ -1.54
SHQ1-207ENST00000475558 STAG3L2P0CL84 134 aa5.45□□□□□ -1.54
SHQ1-207ENST00000475558 STAG3L3P0CL85 134 aa5.45□□□□□ -1.54
SHQ1-207ENST00000475558 PSG1P11464 419 aa5.45□□□□□ -1.54
SHQ1-207ENST00000475558 PSMB8P28062 276 aa5.45□□□□□ -1.54
SHQ1-207ENST00000475558 CDX1P47902 265 aaPredicted RBP5.45□□□□□ -1.54
SHQ1-207ENST00000475558 TPPP2P59282 170 aa5.45□□□□□ -1.54
SHQ1-207ENST00000475558 RUNX1Q01196 453 aa5.45□□□□□ -1.54
SHQ1-207ENST00000475558 KHDC3LQ587J8 217 aa5.45□□□□□ -1.54
SHQ1-207ENST00000475558 C1orf194Q5T5A4 169 aa5.45□□□□□ -1.54
SHQ1-207ENST00000475558 FAM78BQ5VT40 261 aa5.45□□□□□ -1.54
SHQ1-207ENST00000475558 GPHB5Q86YW7 130 aa5.45□□□□□ -1.54
SHQ1-207ENST00000475558 C1QL4Q86Z23 238 aa5.45□□□□□ -1.54
SHQ1-207ENST00000475558 RAB24Q969Q5 203 aa5.45□□□□□ -1.54
SHQ1-207ENST00000475558 SH3BGRL3Q9H299 93 aa5.45□□□□□ -1.54
SHQ1-207ENST00000475558 ZNF702PQ9H963 129 aa5.45□□□□□ -1.54
SHQ1-207ENST00000475558 MANBALQ9NQG1 85 aa5.45□□□□□ -1.54
SHQ1-207ENST00000475558 CLEC5AQ9NY25 188 aa5.45□□□□□ -1.54
SHQ1-207ENST00000475558 PEF1Q9UBV8 284 aaKnown RBP5.45□□□□□ -1.54
SHQ1-207ENST00000475558 FUT9Q9Y231 359 aa5.45□□□□□ -1.54
SHQ1-207ENST00000475558 HIGD1AQ9Y241 93 aa5.45□□□□□ -1.54
SHQ1-207ENST00000475558 DMRT1Q9Y5R6 373 aa5.45□□□□□ -1.54
SHQ1-207ENST00000475558 IGKV1D-37A0A075B6S9 117 aa5.44□□□□□ -1.54
SHQ1-207ENST00000475558 IGKV1OR2-108A0A075B7D4 117 aa5.44□□□□□ -1.54
SHQ1-207ENST00000475558 WI2-2373I1.2A0A1W2PRP0 233 aa5.44□□□□□ -1.54
SHQ1-207ENST00000475558 MAP1LC3B2A6NCE7 125 aa5.44□□□□□ -1.54
SHQ1-207ENST00000475558 KRBOX1C9JBD0 128 aa5.44□□□□□ -1.54
SHQ1-207ENST00000475558 F8W735 103 aaPredicted RBP5.44□□□□□ -1.54
SHQ1-207ENST00000475558 NDUFA4O00483 81 aa5.44□□□□□ -1.54
SHQ1-207ENST00000475558 IGKV1-17P01599 117 aa5.44□□□□□ -1.54
SHQ1-207ENST00000475558 HSPB1P04792 205 aaKnown RBP5.44□□□□□ -1.54
SHQ1-207ENST00000475558 ZP3P21754 424 aa5.44□□□□□ -1.54
SHQ1-207ENST00000475558 NPPCP23582 126 aa5.44□□□□□ -1.54
SHQ1-207ENST00000475558 FHITP49789 147 aa5.44□□□□□ -1.54
SHQ1-207ENST00000475558 ELLP55199 621 aaPredicted RBP5.44□□□□□ -1.54
SHQ1-207ENST00000475558 ZNF90Q03938 601 aa5.44□□□□□ -1.54
SHQ1-207ENST00000475558 GUK1Q16774 197 aa5.44□□□□□ -1.54
SHQ1-207ENST00000475558 FAM74A1Q5RGS3 127 aa5.44□□□□□ -1.54
SHQ1-207ENST00000475558 SAMD13Q5VXD3 122 aa5.44□□□□□ -1.54
SHQ1-207ENST00000475558 FAM122CQ6P4D5 195 aa5.44□□□□□ -1.54
SHQ1-207ENST00000475558 BPIFA4PQ86YQ2 179 aa5.44□□□□□ -1.54
SHQ1-207ENST00000475558 ARL6IP6Q8N6S5 226 aa5.44□□□□□ -1.54
SHQ1-207ENST00000475558 ZNF491Q8N8L2 437 aa5.44□□□□□ -1.54
SHQ1-207ENST00000475558 RPUSD4Q96CM3 377 aaKnown RBP5.44□□□□□ -1.54
SHQ1-207ENST00000475558 RNF125Q96EQ8 232 aa5.44□□□□□ -1.54
SHQ1-207ENST00000475558 GRAMD2BQ96HH9 432 aa5.44□□□□□ -1.54
SHQ1-207ENST00000475558 MS4A10Q96PG2 267 aa5.44□□□□□ -1.54
SHQ1-207ENST00000475558 TCEAL7Q9BRU2 100 aa5.44□□□□□ -1.54
SHQ1-207ENST00000475558 MAP1LC3BQ9GZQ8 125 aa5.44□□□□□ -1.54
SHQ1-207ENST00000475558 TMEM231Q9H6L2 316 aa5.44□□□□□ -1.54
SHQ1-207ENST00000475558 MRPL27Q9P0M9 148 aaKnown RBP5.44□□□□□ -1.54
SHQ1-207ENST00000475558 TMEM14CQ9P0S9 112 aa5.44□□□□□ -1.54
SHQ1-207ENST00000475558 RABAC1Q9UI14 185 aa5.44□□□□□ -1.54
SHQ1-207ENST00000475558 NBEAL2Q6ZNJ1 2754 aa5.43□□□□□ -1.54
SHQ1-207ENST00000475558 RBFOX3A6NFN3 312 aa5.43□□□□□ -1.54
SHQ1-207ENST00000475558 F6UZH7 168 aa5.43□□□□□ -1.54
SHQ1-207ENST00000475558 YIF1AO95070 293 aa5.43□□□□□ -1.54
SHQ1-207ENST00000475558 RPL7P18124 248 aaKnown RBP5.43□□□□□ -1.54
SHQ1-207ENST00000475558 ORM2P19652 201 aa5.43□□□□□ -1.54
SHQ1-207ENST00000475558 ARL3P36405 182 aa5.43□□□□□ -1.54
SHQ1-207ENST00000475558 KRTAP10-3P60369 221 aa5.43□□□□□ -1.54
SHQ1-207ENST00000475558 TIGITQ495A1 244 aa5.43□□□□□ -1.54
SHQ1-207ENST00000475558 LCE1DQ5T752 114 aa5.43□□□□□ -1.54
SHQ1-207ENST00000475558 LCN15Q6UWW0 184 aa5.43□□□□□ -1.54
SHQ1-207ENST00000475558 CLEC19AQ6UXS0 136 aa5.43□□□□□ -1.54
SHQ1-207ENST00000475558 Q6ZSV7 163 aa5.43□□□□□ -1.54
SHQ1-207ENST00000475558 LINC00305Q7Z4B0 112 aa5.43□□□□□ -1.54
SHQ1-207ENST00000475558 REC114Q7Z4M0 266 aa5.43□□□□□ -1.54
SHQ1-207ENST00000475558 LYPD1Q8N2G4 141 aa5.43□□□□□ -1.54
SHQ1-207ENST00000475558 KLHDC1Q8N7A1 406 aa5.43□□□□□ -1.54
SHQ1-207ENST00000475558 OR5AU1Q8NGC0 362 aa5.43□□□□□ -1.54
SHQ1-207ENST00000475558 OR1B1Q8NGR6 318 aa5.43□□□□□ -1.54
SHQ1-207ENST00000475558 LINC01006Q8NI28 216 aa5.43□□□□□ -1.54
SHQ1-207ENST00000475558 MYOZ3Q8TDC0 251 aa5.43□□□□□ -1.54
SHQ1-207ENST00000475558 TMEM37Q8WXS4 190 aa5.43□□□□□ -1.54
SHQ1-207ENST00000475558 RCC1LQ96I51 464 aaKnown RBP5.43□□□□□ -1.54
SHQ1-207ENST00000475558 NOL4LQ96MY1 436 aaPredicted RBP5.43□□□□□ -1.54
SHQ1-207ENST00000475558 FAM210AQ96ND0 272 aa5.43□□□□□ -1.54
SHQ1-207ENST00000475558 METTL26Q96S19 204 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms