RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 LRTM2Q8N967 370 aa5.01□□□□□ -1.61
HDAC3-207ENST00000475549 OR1S1Q8NH92 325 aa5.01□□□□□ -1.61
HDAC3-207ENST00000475549 SCGB3A2Q96PL1 93 aa5.01□□□□□ -1.61
HDAC3-207ENST00000475549 NEU1Q99519 415 aa5.01□□□□□ -1.61
HDAC3-207ENST00000475549 BCL7BQ9BQE9 202 aa5.01□□□□□ -1.61
HDAC3-207ENST00000475549 RNF126Q9BV68 326 aa5.01□□□□□ -1.61
HDAC3-207ENST00000475549 SLC35B3Q9H1N7 401 aa5.01□□□□□ -1.61
HDAC3-207ENST00000475549 CACFD1Q9UGQ2 172 aa5.01□□□□□ -1.61
HDAC3-207ENST00000475549 AMBPP02760 352 aa5□□□□□ -1.61
HDAC3-207ENST00000475549 IAPPP10997 89 aa5□□□□□ -1.61
HDAC3-207ENST00000475549 EMP1P54849 157 aa5□□□□□ -1.61
HDAC3-207ENST00000475549 PAX9P55771 341 aa5□□□□□ -1.61
HDAC3-207ENST00000475549 LYZP61626 148 aa5□□□□□ -1.61
HDAC3-207ENST00000475549 NUTF2P61970 127 aaKnown RBP5□□□□□ -1.61
HDAC3-207ENST00000475549 PPP1R1AQ13522 171 aa5□□□□□ -1.61
HDAC3-207ENST00000475549 C1orf194Q5T5A4 169 aa5□□□□□ -1.61
HDAC3-207ENST00000475549 FAM78BQ5VT40 261 aa5□□□□□ -1.61
HDAC3-207ENST00000475549 AMTNQ6UX39 209 aa5□□□□□ -1.61
HDAC3-207ENST00000475549 FOXI2Q6ZQN5 318 aa5□□□□□ -1.61
HDAC3-207ENST00000475549 THAP8Q8NA92 274 aa5□□□□□ -1.61
HDAC3-207ENST00000475549 MCFD2Q8NI22 146 aa5□□□□□ -1.61
HDAC3-207ENST00000475549 CLUHP3Q96NS8 147 aa5□□□□□ -1.61
HDAC3-207ENST00000475549 TRGV9Q99603 122 aa5□□□□□ -1.61
HDAC3-207ENST00000475549 C1QTNF4Q9BXJ3 329 aa5□□□□□ -1.61
HDAC3-207ENST00000475549 MAGT1Q9H0U3 335 aa5□□□□□ -1.61
HDAC3-207ENST00000475549 DKK2Q9UBU2 259 aa5□□□□□ -1.61
HDAC3-207ENST00000475549 IGHV3OR16-12A0A075B7B8 117 aa4.99□□□□□ -1.61
HDAC3-207ENST00000475549 TRAV8-2A0A0B4J237 113 aa4.99□□□□□ -1.61
HDAC3-207ENST00000475549 A0A0J9YX75 114 aa4.99□□□□□ -1.61
HDAC3-207ENST00000475549 TMEM238LA0A1B0GVL6 79 aa4.99□□□□□ -1.61
HDAC3-207ENST00000475549 SMIM9A6NGZ8 99 aa4.99□□□□□ -1.61
HDAC3-207ENST00000475549 PMS2P5A8MQ11 134 aa4.99□□□□□ -1.61
HDAC3-207ENST00000475549 RTL8CO15255 209 aa4.99□□□□□ -1.61
HDAC3-207ENST00000475549 SYNGR2O43760 224 aa4.99□□□□□ -1.61
HDAC3-207ENST00000475549 SFT2D2O95562 160 aa4.99□□□□□ -1.61
HDAC3-207ENST00000475549 SPART-AS1P0CW21 52 aa4.99□□□□□ -1.61
HDAC3-207ENST00000475549 SLC25A6P12236 298 aa4.99□□□□□ -1.61
HDAC3-207ENST00000475549 ANXA3P12429 323 aa4.99□□□□□ -1.61
HDAC3-207ENST00000475549 PSMB3P49720 205 aa4.99□□□□□ -1.61
HDAC3-207ENST00000475549 SRPXP78539 464 aa4.99□□□□□ -1.61
HDAC3-207ENST00000475549 PYDC2Q56P42 97 aa4.99□□□□□ -1.61
HDAC3-207ENST00000475549 LCE2AQ5TA79 106 aaPredicted RBP4.99□□□□□ -1.61
HDAC3-207ENST00000475549 IGFL4Q6B9Z1 124 aa4.99□□□□□ -1.61
HDAC3-207ENST00000475549 CCDC190Q86UF4 302 aa4.99□□□□□ -1.61
HDAC3-207ENST00000475549 OR8I2Q8N0Y5 310 aa4.99□□□□□ -1.61
HDAC3-207ENST00000475549 TOMM5Q8N4H5 51 aa4.99□□□□□ -1.61
HDAC3-207ENST00000475549 POM121L12Q8N7R1 296 aa4.99□□□□□ -1.61
HDAC3-207ENST00000475549 OR4B1Q8NGF8 309 aa4.99□□□□□ -1.61
HDAC3-207ENST00000475549 SLC35E1Q96K37 410 aa4.99□□□□□ -1.61
HDAC3-207ENST00000475549 RSG1Q9BU20 258 aa4.99□□□□□ -1.61
HDAC3-207ENST00000475549 SLC25A32Q9H2D1 315 aa4.99□□□□□ -1.61
HDAC3-207ENST00000475549 DUXBA0A1W2PPF3 345 aa4.98□□□□□ -1.61
HDAC3-207ENST00000475549 ZNF98A6NK75 572 aa4.98□□□□□ -1.61
HDAC3-207ENST00000475549 A8MTW9 85 aa4.98□□□□□ -1.61
HDAC3-207ENST00000475549 M0R2N4 97 aa4.98□□□□□ -1.61
HDAC3-207ENST00000475549 WRBO00258 174 aa4.98□□□□□ -1.61
HDAC3-207ENST00000475549 ISLRO14498 428 aa4.98□□□□□ -1.61
HDAC3-207ENST00000475549 CRXO43186 299 aaPredicted RBP4.98□□□□□ -1.61
HDAC3-207ENST00000475549 ADAP1O75689 374 aa4.98□□□□□ -1.61
HDAC3-207ENST00000475549 HOXB5P09067 269 aa4.98□□□□□ -1.61
HDAC3-207ENST00000475549 PRB4P10163 310 aaPredicted RBP4.98□□□□□ -1.61
HDAC3-207ENST00000475549 NUP62P37198 522 aaPredicted RBP4.98□□□□□ -1.61
HDAC3-207ENST00000475549 ID1P41134 155 aa4.98□□□□□ -1.61
HDAC3-207ENST00000475549 PSG9Q00887 426 aa4.98□□□□□ -1.61
HDAC3-207ENST00000475549 ID3Q02535 119 aa4.98□□□□□ -1.61
HDAC3-207ENST00000475549 BAK1Q16611 211 aa4.98□□□□□ -1.61
HDAC3-207ENST00000475549 FAM222AQ5U5X8 452 aa4.98□□□□□ -1.61
HDAC3-207ENST00000475549 GGNBP1Q5YKI7 109 aa4.98□□□□□ -1.61
HDAC3-207ENST00000475549 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.98□□□□□ -1.61
HDAC3-207ENST00000475549 SLC25A21Q9BQT8 299 aaPredicted RBP4.98□□□□□ -1.61
HDAC3-207ENST00000475549 NDUFAF3Q9BU61 184 aa4.98□□□□□ -1.61
HDAC3-207ENST00000475549 SLC25A22Q9H936 323 aa4.98□□□□□ -1.61
HDAC3-207ENST00000475549 PAIP2BQ9ULR5 123 aaKnown RBP4.98□□□□□ -1.61
HDAC3-207ENST00000475549 FLVCR2Q9UPI3 526 aa4.98□□□□□ -1.61
HDAC3-207ENST00000475549 TMED3Q9Y3Q3 217 aa4.98□□□□□ -1.61
HDAC3-207ENST00000475549 YTHDF2Q9Y5A9 579 aaKnown RBP4.98□□□□□ -1.61
HDAC3-207ENST00000475549 PKHD1P08F94 4074 aa4.98□□□□□ -1.61
HDAC3-207ENST00000475549 PLAC8L1A1L4L8 177 aa4.97□□□□□ -1.61
HDAC3-207ENST00000475549 C9orf170A2RU37 121 aa4.97□□□□□ -1.61
HDAC3-207ENST00000475549 H3BP45 60 aa4.97□□□□□ -1.61
HDAC3-207ENST00000475549 CCNKO75909 580 aa4.97□□□□□ -1.61
HDAC3-207ENST00000475549 FABP1P07148 127 aa4.97□□□□□ -1.61
HDAC3-207ENST00000475549 P0DMU3 169 aa4.97□□□□□ -1.61
HDAC3-207ENST00000475549 FAM231AP0DMU4 169 aa4.97□□□□□ -1.61
HDAC3-207ENST00000475549 FAM231CP0DMU5 169 aa4.97□□□□□ -1.61
HDAC3-207ENST00000475549 ORM2P19652 201 aa4.97□□□□□ -1.61
HDAC3-207ENST00000475549 FAUP35544 74 aaKnown RBP4.97□□□□□ -1.61
HDAC3-207ENST00000475549 POLR2GP62487 172 aaKnown RBP eCLIP4.97□□□□□ -1.61
HDAC3-207ENST00000475549 RAB11AP62491 216 aa4.97□□□□□ -1.61
HDAC3-207ENST00000475549 SPANXN5Q5MJ07 72 aa4.97□□□□□ -1.61
HDAC3-207ENST00000475549 Q6ZR54 194 aa4.97□□□□□ -1.61
HDAC3-207ENST00000475549 ACOT7LQ6ZUV0 252 aa4.97□□□□□ -1.61
HDAC3-207ENST00000475549 RNF182Q8N6D2 247 aa4.97□□□□□ -1.61
HDAC3-207ENST00000475549 COQ8AQ8NI60 647 aa4.97□□□□□ -1.61
HDAC3-207ENST00000475549 C16orf92Q96LL3 132 aa4.97□□□□□ -1.61
HDAC3-207ENST00000475549 SDHCQ99643 169 aaPredicted RBP4.97□□□□□ -1.61
HDAC3-207ENST00000475549 SRRQ9GZT4 340 aa4.97□□□□□ -1.61
HDAC3-207ENST00000475549 RBM38Q9H0Z9 239 aaKnown RBP4.97□□□□□ -1.61
HDAC3-207ENST00000475549 PFDN2Q9UHV9 154 aa4.97□□□□□ -1.61
HDAC3-207ENST00000475549 RFNGQ9Y644 331 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms