RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 ARL2BPQ9Y2Y0 163 aa0.68□□□□□ -2.3
LTN1-204ENST00000475344 U3KQ87 197 aa0.68□□□□□ -2.3
LTN1-204ENST00000475344 UBR2Q8IWV8 1755 aa0.68□□□□□ -2.3
LTN1-204ENST00000475344 SPTBP11277 2137 aa0.67□□□□□ -2.3
LTN1-204ENST00000475344 NUP98P52948 1817 aa0.67□□□□□ -2.3
LTN1-204ENST00000475344 TRBV19A0A075B6N1 114 aa0.67□□□□□ -2.3
LTN1-204ENST00000475344 CCDC160A6NGH7 325 aa0.67□□□□□ -2.3
LTN1-204ENST00000475344 ZNF736B4DX44 427 aaPredicted RBP0.67□□□□□ -2.3
LTN1-204ENST00000475344 SRP14P37108 136 aaKnown RBP0.67□□□□□ -2.3
LTN1-204ENST00000475344 TAF1AQ15573 450 aaPredicted RBP0.67□□□□□ -2.3
LTN1-204ENST00000475344 MPV17LQ2QL34 196 aa0.67□□□□□ -2.3
LTN1-204ENST00000475344 LYRM7Q5U5X0 104 aa0.67□□□□□ -2.3
LTN1-204ENST00000475344 GOLT1AQ6ZVE7 132 aa0.67□□□□□ -2.3
LTN1-204ENST00000475344 PDZD9Q8IXQ8 264 aa0.67□□□□□ -2.3
LTN1-204ENST00000475344 SLC30A7Q8NEW0 376 aa0.67□□□□□ -2.3
LTN1-204ENST00000475344 LINC00467Q9BRT7 94 aa0.67□□□□□ -2.3
LTN1-204ENST00000475344 C6orf62Q9GZU0 229 aaPredicted RBP0.67□□□□□ -2.3
LTN1-204ENST00000475344 TMEM126AQ9H061 195 aa0.67□□□□□ -2.3
LTN1-204ENST00000475344 CDC42SE1Q9NRR8 79 aa0.67□□□□□ -2.3
LTN1-204ENST00000475344 OPTCQ9UBM4 332 aa0.67□□□□□ -2.3
LTN1-204ENST00000475344 ZDBF2Q9HCK1 2354 aa0.67□□□□□ -2.3
LTN1-204ENST00000475344 LAMA4Q16363 1823 aa0.66□□□□□ -2.3
LTN1-204ENST00000475344 CNTRLQ7Z7A1 2325 aa0.66□□□□□ -2.3
LTN1-204ENST00000475344 HMGB3O15347 200 aaKnown RBP0.66□□□□□ -2.3
LTN1-204ENST00000475344 ATP5HO75947 161 aa0.66□□□□□ -2.3
LTN1-204ENST00000475344 ZNF25P17030 456 aaPredicted RBP0.66□□□□□ -2.3
LTN1-204ENST00000475344 KRR1Q13601 381 aaKnown RBP0.66□□□□□ -2.3
LTN1-204ENST00000475344 ARMC1Q9NVT9 282 aa0.66□□□□□ -2.3
LTN1-204ENST00000475344 FANCMQ8IYD8 2048 aa0.65□□□□□ -2.3
LTN1-204ENST00000475344 ZGRF1Q86YA3 2104 aa0.65□□□□□ -2.3
LTN1-204ENST00000475344 FMN1Q68DA7 1419 aa0.65□□□□□ -2.3
LTN1-204ENST00000475344 ADGRL3Q9HAR2 1447 aa0.65□□□□□ -2.3
LTN1-204ENST00000475344 ASH1LQ9NR48 2969 aaKnown RBP0.65□□□□□ -2.31
LTN1-204ENST00000475344 M0R378 163 aa0.65□□□□□ -2.31
LTN1-204ENST00000475344 TAX1BP3O14907 124 aa0.65□□□□□ -2.31
LTN1-204ENST00000475344 CST8O60676 142 aa0.65□□□□□ -2.31
LTN1-204ENST00000475344 TIMM17BO60830 172 aa0.65□□□□□ -2.31
LTN1-204ENST00000475344 DHFRP00374 187 aa0.65□□□□□ -2.31
LTN1-204ENST00000475344 C1QBP02746 253 aa0.65□□□□□ -2.31
LTN1-204ENST00000475344 HOXA6P31267 233 aa0.65□□□□□ -2.31
LTN1-204ENST00000475344 HSPE1P61604 102 aaKnown RBP0.65□□□□□ -2.31
LTN1-204ENST00000475344 MRPS25P82663 173 aaKnown RBP0.65□□□□□ -2.31
LTN1-204ENST00000475344 OR2T35Q8NGX2 323 aa0.65□□□□□ -2.31
LTN1-204ENST00000475344 CHMP6Q96FZ7 201 aa0.65□□□□□ -2.31
LTN1-204ENST00000475344 YPEL2Q96QA6 119 aa0.65□□□□□ -2.31
LTN1-204ENST00000475344 AMELYQ99218 206 aa0.65□□□□□ -2.31
LTN1-204ENST00000475344 PHB2Q99623 299 aa0.65□□□□□ -2.31
LTN1-204ENST00000475344 CHCHD2Q9Y6H1 151 aaPredicted RBP0.65□□□□□ -2.31
LTN1-204ENST00000475344 KDM6AO15550 1401 aaPredicted RBP0.64□□□□□ -2.31
LTN1-204ENST00000475344 CAMSAP1Q5T5Y3 1602 aa0.64□□□□□ -2.31
LTN1-204ENST00000475344 CITO14578 2027 aa0.64□□□□□ -2.31
LTN1-204ENST00000475344 TRGV10A0A0A0MS01 117 aa0.64□□□□□ -2.31
LTN1-204ENST00000475344 B4DSR2 109 aa0.64□□□□□ -2.31
LTN1-204ENST00000475344 NDUFB3O43676 98 aa0.64□□□□□ -2.31
LTN1-204ENST00000475344 MRPS15P82914 257 aaKnown RBP0.64□□□□□ -2.31
LTN1-204ENST00000475344 SPRNQ5BIV9 151 aa0.64□□□□□ -2.31
LTN1-204ENST00000475344 HACD4Q5VWC8 232 aa0.64□□□□□ -2.31
LTN1-204ENST00000475344 C22orf39Q6P5X5 142 aa0.64□□□□□ -2.31
LTN1-204ENST00000475344 EXOC3-AS1Q8N2X6 119 aa0.64□□□□□ -2.31
LTN1-204ENST00000475344 TMEM254Q8TBM7 123 aa0.64□□□□□ -2.31
LTN1-204ENST00000475344 GPER1Q99527 375 aa0.64□□□□□ -2.31
LTN1-204ENST00000475344 IMUPQ9GZP8 106 aa0.64□□□□□ -2.31
LTN1-204ENST00000475344 MED29Q9NX70 200 aa0.64□□□□□ -2.31
LTN1-204ENST00000475344 N4BP2Q86UW6 1770 aaPredicted RBP0.64□□□□□ -2.31
LTN1-204ENST00000475344 ZNF462Q96JM2 2506 aa0.64□□□□□ -2.31
LTN1-204ENST00000475344 SIP14410 1827 aa0.64□□□□□ -2.31
LTN1-204ENST00000475344 TNS3Q68CZ2 1445 aa0.64□□□□□ -2.31
LTN1-204ENST00000475344 TCRBV4S1A1TA0A5B7 111 aa0.63□□□□□ -2.31
LTN1-204ENST00000475344 IFNA7P01567 189 aa0.63□□□□□ -2.31
LTN1-204ENST00000475344 ROMO1P60602 79 aa0.63□□□□□ -2.31
LTN1-204ENST00000475344 NCALDP61601 193 aa0.63□□□□□ -2.31
LTN1-204ENST00000475344 OR10K1Q8NGX5 313 aa0.63□□□□□ -2.31
LTN1-204ENST00000475344 PATE1Q8WXA2 126 aa0.63□□□□□ -2.31
LTN1-204ENST00000475344 SLC25A21Q9BQT8 299 aaPredicted RBP0.63□□□□□ -2.31
LTN1-204ENST00000475344 TAS2R7Q9NYW3 318 aa0.63□□□□□ -2.31
LTN1-204ENST00000475344 MIA2Q96PC5 1412 aa0.63□□□□□ -2.31
LTN1-204ENST00000475344 E9PCH4 1651 aa0.62□□□□□ -2.31
LTN1-204ENST00000475344 MYLKQ15746 1914 aa0.62□□□□□ -2.31
LTN1-204ENST00000475344 PEAK1Q9H792 1746 aa0.62□□□□□ -2.31
LTN1-204ENST00000475344 TMEM256-PLSCR3K7ERE1 68 aa0.62□□□□□ -2.31
LTN1-204ENST00000475344 CCL25O15444 150 aa0.62□□□□□ -2.31
LTN1-204ENST00000475344 CCL16O15467 120 aa0.62□□□□□ -2.31
LTN1-204ENST00000475344 TMED2Q15363 201 aa0.62□□□□□ -2.31
LTN1-204ENST00000475344 FAM74A1Q5RGS3 127 aa0.62□□□□□ -2.31
LTN1-204ENST00000475344 BCL2L15Q5TBC7 163 aa0.62□□□□□ -2.31
LTN1-204ENST00000475344 DHRS4L2Q6PKH6 230 aa0.62□□□□□ -2.31
LTN1-204ENST00000475344 ST6GALNAC3Q8NDV1 305 aa0.62□□□□□ -2.31
LTN1-204ENST00000475344 PXT1Q8NFP0 134 aa0.62□□□□□ -2.31
LTN1-204ENST00000475344 BORCS5Q969J3 196 aa0.62□□□□□ -2.31
LTN1-204ENST00000475344 CEP19Q96LK0 163 aa0.62□□□□□ -2.31
LTN1-204ENST00000475344 TMEM70Q9BUB7 260 aa0.62□□□□□ -2.31
LTN1-204ENST00000475344 ARL5AQ9Y689 179 aa0.62□□□□□ -2.31
LTN1-204ENST00000475344 MGAMO43451 1857 aa0.61□□□□□ -2.31
LTN1-204ENST00000475344 MUC5ACP98088 5654 aa0.61□□□□□ -2.31
LTN1-204ENST00000475344 A8MWV9 139 aa0.61□□□□□ -2.31
LTN1-204ENST00000475344 BANF1O75531 89 aa0.61□□□□□ -2.31
LTN1-204ENST00000475344 DNAL4O96015 105 aa0.61□□□□□ -2.31
LTN1-204ENST00000475344 CD2P06729 351 aa0.61□□□□□ -2.31
LTN1-204ENST00000475344 UBE2BP63146 152 aa0.61□□□□□ -2.31
LTN1-204ENST00000475344 GNG5P63218 68 aa0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms