RNA–Protein interactions for RNA: ENST00000475268.5

SEC61A2-213, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

TSL 1 (best)

Gene SEC61A2, Length 2,183 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-213ENST00000475268 LINC00479Q96M42 142 aa14.32□□□□□ -0.12
SEC61A2-213ENST00000475268 TMEM68Q96MH6 324 aa14.32□□□□□ -0.12
SEC61A2-213ENST00000475268 SHANK2-AS3Q9BTD1 123 aa14.32□□□□□ -0.12
SEC61A2-213ENST00000475268 LY96Q9Y6Y9 160 aa14.32□□□□□ -0.12
SEC61A2-213ENST00000475268 ABCA12Q86UK0 2595 aa14.31□□□□□ -0.12
SEC61A2-213ENST00000475268 PPP1R2P9O14990 202 aa14.31□□□□□ -0.12
SEC61A2-213ENST00000475268 USF2Q15853 346 aaPredicted RBP14.31□□□□□ -0.12
SEC61A2-213ENST00000475268 VN1R17PQ8TDU5 208 aa14.31□□□□□ -0.12
SEC61A2-213ENST00000475268 BIN3Q9NQY0 253 aa14.31□□□□□ -0.12
SEC61A2-213ENST00000475268 BEX4Q9NWD9 120 aaPredicted RBP14.31□□□□□ -0.12
SEC61A2-213ENST00000475268 PGPA6NDG6 321 aa14.3□□□□□ -0.12
SEC61A2-213ENST00000475268 PEX7O00628 323 aa14.3□□□□□ -0.12
SEC61A2-213ENST00000475268 CTSGP08311 255 aa14.3□□□□□ -0.12
SEC61A2-213ENST00000475268 FCGR2BP31994 310 aaPredicted RBP14.3□□□□□ -0.12
SEC61A2-213ENST00000475268 MYCNOSP40205 109 aa14.3□□□□□ -0.12
SEC61A2-213ENST00000475268 TEX38Q6PEX7 206 aa14.3□□□□□ -0.12
SEC61A2-213ENST00000475268 MS4A10Q96PG2 267 aa14.3□□□□□ -0.12
SEC61A2-213ENST00000475268 TMEM14CQ9P0S9 112 aa14.3□□□□□ -0.12
SEC61A2-213ENST00000475268 LINC00527Q9UJ94 153 aa14.3□□□□□ -0.12
SEC61A2-213ENST00000475268 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.3□□□□□ -0.12
SEC61A2-213ENST00000475268 A0A1W2PPQ1 181 aa14.3□□□□□ -0.12
SEC61A2-213ENST00000475268 H3BRN7 92 aa14.3□□□□□ -0.12
SEC61A2-213ENST00000475268 SCGB2A1O75556 95 aa14.3□□□□□ -0.12
SEC61A2-213ENST00000475268 SLC25A5P05141 298 aaKnown RBP14.3□□□□□ -0.12
SEC61A2-213ENST00000475268 GNG5P63218 68 aa14.3□□□□□ -0.12
SEC61A2-213ENST00000475268 OR5I1Q13606 314 aa14.3□□□□□ -0.12
SEC61A2-213ENST00000475268 BCL6BQ8N143 479 aaPredicted RBP14.3□□□□□ -0.12
SEC61A2-213ENST00000475268 OR10G8Q8NGN5 311 aa14.3□□□□□ -0.12
SEC61A2-213ENST00000475268 TXN2Q99757 166 aa14.3□□□□□ -0.12
SEC61A2-213ENST00000475268 CHRDL1Q9BU40 450 aa14.3□□□□□ -0.12
SEC61A2-213ENST00000475268 TRBV9A0A0B4J1U6 114 aa14.29□□□□□ -0.12
SEC61A2-213ENST00000475268 S100A6P06703 90 aa14.29□□□□□ -0.12
SEC61A2-213ENST00000475268 SRP14P37108 136 aaKnown RBP14.29□□□□□ -0.12
SEC61A2-213ENST00000475268 CNN1P51911 297 aaKnown RBP14.29□□□□□ -0.12
SEC61A2-213ENST00000475268 LOXL1Q08397 574 aaPredicted RBP14.29□□□□□ -0.12
SEC61A2-213ENST00000475268 Q5PR19 223 aa14.29□□□□□ -0.12
SEC61A2-213ENST00000475268 TRAV41A0A0B4J266 112 aa14.29□□□□□ -0.12
SEC61A2-213ENST00000475268 A6NDX4 124 aa14.29□□□□□ -0.12
SEC61A2-213ENST00000475268 TRGC2P03986 189 aa14.29□□□□□ -0.12
SEC61A2-213ENST00000475268 GPR183P32249 361 aa14.29□□□□□ -0.12
SEC61A2-213ENST00000475268 FAM3BP58499 235 aaPredicted RBP14.29□□□□□ -0.12
SEC61A2-213ENST00000475268 KCNIP4Q6PIL6 250 aa14.29□□□□□ -0.12
SEC61A2-213ENST00000475268 IGF2BP2-AS1Q96M15 143 aa14.29□□□□□ -0.12
SEC61A2-213ENST00000475268 ZNF586Q9NXT0 402 aa14.29□□□□□ -0.12
SEC61A2-213ENST00000475268 EPDR1Q9UM22 224 aa14.29□□□□□ -0.12
SEC61A2-213ENST00000475268 RPH3ALQ9UNE2 315 aa14.29□□□□□ -0.12
SEC61A2-213ENST00000475268 HIST1H1EP10412 219 aaKnown RBP14.28□□□□□ -0.12
SEC61A2-213ENST00000475268 ADMP35318 185 aa14.28□□□□□ -0.12
SEC61A2-213ENST00000475268 KLK9Q2XQG4 91 aa14.28□□□□□ -0.12
SEC61A2-213ENST00000475268 BPIFA4PQ86YQ2 179 aa14.28□□□□□ -0.12
SEC61A2-213ENST00000475268 ZNF502Q8TBZ5 544 aa14.28□□□□□ -0.12
SEC61A2-213ENST00000475268 Q9H3A6 140 aa14.28□□□□□ -0.12
SEC61A2-213ENST00000475268 CDC42EP3Q9UKI2 254 aa14.28□□□□□ -0.12
SEC61A2-213ENST00000475268 KLK9Q9UKQ9 250 aa14.28□□□□□ -0.12
SEC61A2-213ENST00000475268 NAV2Q8IVL1 2488 aa14.27□□□□□ -0.12
SEC61A2-213ENST00000475268 TRAV34A0A0B4J273 112 aa14.27□□□□□ -0.12
SEC61A2-213ENST00000475268 IGHV3-35A0A0C4DH35 117 aa14.27□□□□□ -0.12
SEC61A2-213ENST00000475268 ERVFC1-1P60608 527 aa14.27□□□□□ -0.12
SEC61A2-213ENST00000475268 SNRPEP62304 92 aaKnown RBP14.27□□□□□ -0.12
SEC61A2-213ENST00000475268 PYGO2Q9BRQ0 406 aa14.27□□□□□ -0.12
SEC61A2-213ENST00000475268 TCEAL7Q9BRU2 100 aa14.27□□□□□ -0.12
SEC61A2-213ENST00000475268 TENM4Q6N022 2769 aa14.27□□□□□ -0.12
SEC61A2-213ENST00000475268 ZNF98A6NK75 572 aa14.27□□□□□ -0.13
SEC61A2-213ENST00000475268 CLEC3BP05452 202 aa14.27□□□□□ -0.13
SEC61A2-213ENST00000475268 MGST1P10620 155 aaKnown RBP14.27□□□□□ -0.13
SEC61A2-213ENST00000475268 TAS2R60P59551 318 aa14.27□□□□□ -0.13
SEC61A2-213ENST00000475268 S100A7AQ86SG5 101 aa14.27□□□□□ -0.13
SEC61A2-213ENST00000475268 LRRC75A-AS1Q8N1F1 130 aa14.27□□□□□ -0.13
SEC61A2-213ENST00000475268 NHLRC2Q8NBF2 726 aa14.27□□□□□ -0.13
SEC61A2-213ENST00000475268 KMT2BQ9UMN6 2715 aaPredicted RBP14.27□□□□□ -0.13
SEC61A2-213ENST00000475268 J3QLI3 93 aa14.26□□□□□ -0.13
SEC61A2-213ENST00000475268 OR4F17Q8NGA8 305 aa14.26□□□□□ -0.13
SEC61A2-213ENST00000475268 PITPNC1Q9UKF7 332 aa14.26□□□□□ -0.13
SEC61A2-213ENST00000475268 PPP5D1E7EU14 171 aa14.26□□□□□ -0.13
SEC61A2-213ENST00000475268 SLC17A3O00476 420 aa14.26□□□□□ -0.13
SEC61A2-213ENST00000475268 ISLRO14498 428 aa14.26□□□□□ -0.13
SEC61A2-213ENST00000475268 GGCTO75223 188 aaKnown RBP14.26□□□□□ -0.13
SEC61A2-213ENST00000475268 IGLV2-8P01709 118 aa14.26□□□□□ -0.13
SEC61A2-213ENST00000475268 PLA2G2AP14555 144 aa14.26□□□□□ -0.13
SEC61A2-213ENST00000475268 IGHV4-31P0DP07 118 aa14.25□□□□□ -0.13
SEC61A2-213ENST00000475268 BLCAPP62952 87 aa14.25□□□□□ -0.13
SEC61A2-213ENST00000475268 SMUG1Q53HV7 270 aa14.25□□□□□ -0.13
SEC61A2-213ENST00000475268 CLEC19AQ6UXS0 136 aa14.25□□□□□ -0.13
SEC61A2-213ENST00000475268 C5orf17Q8NAS9 161 aa14.25□□□□□ -0.13
SEC61A2-213ENST00000475268 SGK494Q96LW2 274 aa14.25□□□□□ -0.13
SEC61A2-213ENST00000475268 C17orf77Q96MU5 243 aa14.25□□□□□ -0.13
SEC61A2-213ENST00000475268 IMMP2LQ96T52 175 aa14.25□□□□□ -0.13
SEC61A2-213ENST00000475268 GNB4Q9HAV0 340 aa14.25□□□□□ -0.13
SEC61A2-213ENST00000475268 IGHV3OR16-8A0A075B7F1 116 aa14.24□□□□□ -0.13
SEC61A2-213ENST00000475268 M0QZK8 103 aa14.24□□□□□ -0.13
SEC61A2-213ENST00000475268 UBE2G1P62253 170 aa14.24□□□□□ -0.13
SEC61A2-213ENST00000475268 C19orf54Q5BKX5 351 aa14.24□□□□□ -0.13
SEC61A2-213ENST00000475268 EXOC3-AS1Q8N2X6 119 aa14.24□□□□□ -0.13
SEC61A2-213ENST00000475268 EEF1AKMT3Q96AZ1 226 aa14.24□□□□□ -0.13
SEC61A2-213ENST00000475268 CCDC140Q96MF4 163 aa14.24□□□□□ -0.13
SEC61A2-213ENST00000475268 RNASE7Q9H1E1 156 aaKnown RBP14.24□□□□□ -0.13
SEC61A2-213ENST00000475268 TGOLN2O43493 480 aa14.24□□□□□ -0.13
SEC61A2-213ENST00000475268 GCGP01275 180 aa14.24□□□□□ -0.13
SEC61A2-213ENST00000475268 IGLC2P0DOY2 106 aa14.24□□□□□ -0.13
SEC61A2-213ENST00000475268 CRIP2P52943 208 aaPredicted RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms