RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 C2orf50Q96LR7 162 aa17.65■□□□□ 0.42
CPNE1-223ENST00000475146 MGAT4CQ9UBM8 478 aa17.65■□□□□ 0.42
CPNE1-223ENST00000475146 K7EPK0 472 aa17.64■□□□□ 0.41
CPNE1-223ENST00000475146 IL5P05113 134 aa17.64■□□□□ 0.41
CPNE1-223ENST00000475146 ORM2P19652 201 aa17.64■□□□□ 0.41
CPNE1-223ENST00000475146 ACTL10Q5JWF8 245 aa17.64■□□□□ 0.41
CPNE1-223ENST00000475146 GSG1LQ6UXU4 331 aa17.64■□□□□ 0.41
CPNE1-223ENST00000475146 TMEM182Q6ZP80 229 aaPredicted RBP17.64■□□□□ 0.41
CPNE1-223ENST00000475146 CYP2G1PQ6ZSU1 146 aa17.64■□□□□ 0.41
CPNE1-223ENST00000475146 OR8I2Q8N0Y5 310 aa17.64■□□□□ 0.41
CPNE1-223ENST00000475146 OR1B1Q8NGR6 318 aa17.64■□□□□ 0.41
CPNE1-223ENST00000475146 A0A0J9YWU9 116 aa17.63■□□□□ 0.41
CPNE1-223ENST00000475146 BCAP31P51572 246 aa17.63■□□□□ 0.41
CPNE1-223ENST00000475146 TRPT1Q86TN4 253 aaKnown RBP17.63■□□□□ 0.41
CPNE1-223ENST00000475146 TMEM147Q9BVK8 224 aa17.63■□□□□ 0.41
CPNE1-223ENST00000475146 GPN1Q9HCN4 374 aaPredicted RBP17.63■□□□□ 0.41
CPNE1-223ENST00000475146 S100A10P60903 97 aa17.62■□□□□ 0.41
CPNE1-223ENST00000475146 GATAD1Q8WUU5 269 aa17.62■□□□□ 0.41
CPNE1-223ENST00000475146 SLC25A22Q9H936 323 aa17.62■□□□□ 0.41
CPNE1-223ENST00000475146 SLC45A2Q9UMX9 530 aa17.62■□□□□ 0.41
CPNE1-223ENST00000475146 FNDC10F2Z333 226 aa17.61■□□□□ 0.41
CPNE1-223ENST00000475146 CAV2P51636 162 aa17.61■□□□□ 0.41
CPNE1-223ENST00000475146 NRARPQ7Z6K4 114 aa17.61■□□□□ 0.41
CPNE1-223ENST00000475146 NPVFQ9HCQ7 196 aa17.61■□□□□ 0.41
CPNE1-223ENST00000475146 SEPSECSQ9HD40 501 aaKnown RBP17.61■□□□□ 0.41
CPNE1-223ENST00000475146 DOK5Q9P104 306 aa17.61■□□□□ 0.41
CPNE1-223ENST00000475146 PVALBP20472 110 aaPredicted RBP17.6■□□□□ 0.41
CPNE1-223ENST00000475146 S100A7P31151 101 aa17.6■□□□□ 0.41
CPNE1-223ENST00000475146 ARL16Q0P5N6 197 aa17.6■□□□□ 0.41
CPNE1-223ENST00000475146 DNAH7Q8WXX0 4024 aa17.59■□□□□ 0.41
CPNE1-223ENST00000475146 ZNF98A6NK75 572 aa17.59■□□□□ 0.41
CPNE1-223ENST00000475146 LINC00869P0C866 280 aa17.59■□□□□ 0.41
CPNE1-223ENST00000475146 SPP1P10451 314 aa17.59■□□□□ 0.41
CPNE1-223ENST00000475146 ID1P41134 155 aa17.59■□□□□ 0.41
CPNE1-223ENST00000475146 DEFA1P59665 94 aa17.59■□□□□ 0.41
CPNE1-223ENST00000475146 DEFA3P59666 94 aa17.59■□□□□ 0.41
CPNE1-223ENST00000475146 SELENOTP62341 195 aa17.59■□□□□ 0.41
CPNE1-223ENST00000475146 MORN3Q6PF18 240 aaPredicted RBP17.59■□□□□ 0.41
CPNE1-223ENST00000475146 LINC00052Q96N35 136 aa17.59■□□□□ 0.41
CPNE1-223ENST00000475146 RARRES2Q99969 163 aa17.59■□□□□ 0.41
CPNE1-223ENST00000475146 SLC25A32Q9H2D1 315 aa17.59■□□□□ 0.41
CPNE1-223ENST00000475146 AGRNO00468 2067 aa17.59■□□□□ 0.41
CPNE1-223ENST00000475146 KMT2CQ8NEZ4 4911 aaKnown RBP17.58■□□□□ 0.4
CPNE1-223ENST00000475146 GALR1P47211 349 aa17.58■□□□□ 0.4
CPNE1-223ENST00000475146 RAP2BP61225 183 aa17.58■□□□□ 0.4
CPNE1-223ENST00000475146 SLC38A11Q08AI6 406 aa17.58■□□□□ 0.4
CPNE1-223ENST00000475146 TEPPQ6URK8 271 aa17.58■□□□□ 0.4
CPNE1-223ENST00000475146 OR11H2Q8NH07 326 aa17.58■□□□□ 0.4
CPNE1-223ENST00000475146 GGACTQ9BVM4 153 aa17.58■□□□□ 0.4
CPNE1-223ENST00000475146 INMT-MINDY4F8WBC2 141 aa17.57■□□□□ 0.4
CPNE1-223ENST00000475146 RAB32Q13637 225 aa17.57■□□□□ 0.4
CPNE1-223ENST00000475146 TMEM217Q8N7C4 229 aa17.57■□□□□ 0.4
CPNE1-223ENST00000475146 SCRT1Q9BWW7 348 aa17.57■□□□□ 0.4
CPNE1-223ENST00000475146 C11orf1Q9H5F2 150 aa17.57■□□□□ 0.4
CPNE1-223ENST00000475146 HIGD1AQ9Y241 93 aa17.57■□□□□ 0.4
CPNE1-223ENST00000475146 FAM24AA6NFZ4 105 aa17.56■□□□□ 0.4
CPNE1-223ENST00000475146 GOSR2O14653 212 aa17.56■□□□□ 0.4
CPNE1-223ENST00000475146 PRAF2O60831 178 aa17.56■□□□□ 0.4
CPNE1-223ENST00000475146 HYPMO75409 117 aa17.56■□□□□ 0.4
CPNE1-223ENST00000475146 DEDDO75618 318 aa17.56■□□□□ 0.4
CPNE1-223ENST00000475146 CST7O76096 145 aa17.56■□□□□ 0.4
CPNE1-223ENST00000475146 OR5G3P0C626 314 aa17.56■□□□□ 0.4
CPNE1-223ENST00000475146 C4BPBP20851 252 aa17.56■□□□□ 0.4
CPNE1-223ENST00000475146 PSMB3P49720 205 aa17.56■□□□□ 0.4
CPNE1-223ENST00000475146 TMEM41BQ5BJD5 291 aa17.56■□□□□ 0.4
CPNE1-223ENST00000475146 H3BRN7 92 aa17.55■□□□□ 0.4
CPNE1-223ENST00000475146 SOCS3O14543 225 aa17.55■□□□□ 0.4
CPNE1-223ENST00000475146 EWSR1Q01844 656 aaKnown RBP eCLIP17.55■□□□□ 0.4
CPNE1-223ENST00000475146 IL15RAQ13261 267 aa17.55■□□□□ 0.4
CPNE1-223ENST00000475146 PMS2P11Q13670 270 aa17.55■□□□□ 0.4
CPNE1-223ENST00000475146 ZNF546Q86UE3 836 aa17.55■□□□□ 0.4
CPNE1-223ENST00000475146 GPR82Q96P67 336 aa17.55■□□□□ 0.4
CPNE1-223ENST00000475146 RSG1Q9BU20 258 aa17.55■□□□□ 0.4
CPNE1-223ENST00000475146 SLC25A39Q9BZJ4 359 aaPredicted RBP17.55■□□□□ 0.4
CPNE1-223ENST00000475146 CXorf65A6NEN9 183 aa17.54■□□□□ 0.4
CPNE1-223ENST00000475146 SIX6O95475 246 aa17.54■□□□□ 0.4
CPNE1-223ENST00000475146 GIG44P09565 113 aaPredicted RBP17.54■□□□□ 0.4
CPNE1-223ENST00000475146 MEOX2P50222 304 aa17.54■□□□□ 0.4
CPNE1-223ENST00000475146 PLP1P60201 277 aa17.54■□□□□ 0.4
CPNE1-223ENST00000475146 SAMD13Q5VXD3 122 aa17.54■□□□□ 0.4
CPNE1-223ENST00000475146 C16orf92Q96LL3 132 aa17.54■□□□□ 0.4
CPNE1-223ENST00000475146 SHANK2-AS3Q9BTD1 123 aa17.54■□□□□ 0.4
CPNE1-223ENST00000475146 ARL6Q9H0F7 186 aa17.54■□□□□ 0.4
CPNE1-223ENST00000475146 H3BMM0 161 aa17.53■□□□□ 0.4
CPNE1-223ENST00000475146 ISLRO14498 428 aa17.53■□□□□ 0.4
CPNE1-223ENST00000475146 HLA-DRB4P13762 266 aa17.53■□□□□ 0.4
CPNE1-223ENST00000475146 DEFB1P60022 68 aa17.53■□□□□ 0.4
CPNE1-223ENST00000475146 UHRF2Q96PU4 802 aa17.53■□□□□ 0.4
CPNE1-223ENST00000475146 LYRM2Q9NU23 88 aaPredicted RBP17.53■□□□□ 0.4
CPNE1-223ENST00000475146 HLA-DRB4X5D2U9 266 aa17.53■□□□□ 0.4
CPNE1-223ENST00000475146 AGPAT2O15120 278 aa17.52■□□□□ 0.4
CPNE1-223ENST00000475146 NUTF2P61970 127 aaKnown RBP17.52■□□□□ 0.4
CPNE1-223ENST00000475146 S100A7AQ86SG5 101 aa17.52■□□□□ 0.4
CPNE1-223ENST00000475146 STX12Q86Y82 276 aa17.52■□□□□ 0.4
CPNE1-223ENST00000475146 MARVELD1Q9BSK0 173 aa17.52■□□□□ 0.4
CPNE1-223ENST00000475146 CLEC5AQ9NY25 188 aa17.52■□□□□ 0.4
CPNE1-223ENST00000475146 IGSF23A1L1A6 192 aa17.51■□□□□ 0.39
CPNE1-223ENST00000475146 ATF4P18848 351 aaPredicted RBP17.51■□□□□ 0.39
CPNE1-223ENST00000475146 SULT1A1P50225 295 aa17.51■□□□□ 0.39
CPNE1-223ENST00000475146 GDF5OSQ5U4N7 250 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms