RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 SNRPD3P62318 126 aaKnown RBP10.04□□□□□ -0.8
CCDC78-209ENST00000474647 FAM219AQ8IW50 185 aa10.04□□□□□ -0.8
CCDC78-209ENST00000474647 IGHV3OR16-12A0A075B7B8 117 aa10.03□□□□□ -0.8
CCDC78-209ENST00000474647 TRAV30A0A087WSZ9 112 aa10.03□□□□□ -0.8
CCDC78-209ENST00000474647 IGKV1-17P01599 117 aa10.03□□□□□ -0.8
CCDC78-209ENST00000474647 AP2S1P53680 142 aaPredicted RBP10.03□□□□□ -0.8
CCDC78-209ENST00000474647 LGALS9BQ3B8N2 356 aa10.03□□□□□ -0.8
CCDC78-209ENST00000474647 C16orf54Q6UWD8 224 aa10.03□□□□□ -0.8
CCDC78-209ENST00000474647 LYZL2Q7Z4W2 148 aa10.03□□□□□ -0.8
CCDC78-209ENST00000474647 GLMPQ8WWB7 406 aa10.03□□□□□ -0.8
CCDC78-209ENST00000474647 PPP1R14BQ96C90 147 aa10.03□□□□□ -0.8
CCDC78-209ENST00000474647 RRNAD1Q96FB5 475 aaKnown RBP10.03□□□□□ -0.8
CCDC78-209ENST00000474647 A0A0G2JRQ6 117 aa10.02□□□□□ -0.81
CCDC78-209ENST00000474647 RPS10-NUDT3A0A1W2PQS6 291 aa10.02□□□□□ -0.81
CCDC78-209ENST00000474647 FAM90A26D6RGX4 464 aa10.02□□□□□ -0.81
CCDC78-209ENST00000474647 RND2P52198 227 aa10.02□□□□□ -0.81
CCDC78-209ENST00000474647 FXYD7P58549 80 aa10.02□□□□□ -0.81
CCDC78-209ENST00000474647 NMSQ5H8A3 153 aa10.02□□□□□ -0.81
CCDC78-209ENST00000474647 ZNF575Q86XF7 245 aa10.02□□□□□ -0.81
CCDC78-209ENST00000474647 C12orf45Q8N5I9 185 aaPredicted RBP10.02□□□□□ -0.81
CCDC78-209ENST00000474647 OR1S2Q8NGQ3 325 aa10.02□□□□□ -0.81
CCDC78-209ENST00000474647 Q8WTZ3 238 aa10.02□□□□□ -0.81
CCDC78-209ENST00000474647 TMED3Q9Y3Q3 217 aa10.02□□□□□ -0.81
CCDC78-209ENST00000474647 ALG5Q9Y673 324 aa10.02□□□□□ -0.81
CCDC78-209ENST00000474647 H3BMM0 161 aa10.01□□□□□ -0.81
CCDC78-209ENST00000474647 IGKV3-20P01619 116 aa10.01□□□□□ -0.81
CCDC78-209ENST00000474647 IL4P05112 153 aa10.01□□□□□ -0.81
CCDC78-209ENST00000474647 SPART-AS1P0CW21 52 aa10.01□□□□□ -0.81
CCDC78-209ENST00000474647 HTN3P15516 51 aa10.01□□□□□ -0.81
CCDC78-209ENST00000474647 OR10J1P30954 320 aa10.01□□□□□ -0.81
CCDC78-209ENST00000474647 USF2Q15853 346 aaPredicted RBP10.01□□□□□ -0.81
CCDC78-209ENST00000474647 SIGLEC15Q6ZMC9 328 aa10.01□□□□□ -0.81
CCDC78-209ENST00000474647 NRN1Q9NPD7 142 aa10.01□□□□□ -0.81
CCDC78-209ENST00000474647 HEYLQ9NQ87 328 aaPredicted RBP10.01□□□□□ -0.81
CCDC78-209ENST00000474647 U3KQE9 123 aa10.01□□□□□ -0.81
CCDC78-209ENST00000474647 ADAP1O75689 374 aa10□□□□□ -0.81
CCDC78-209ENST00000474647 HOXB5P09067 269 aa10□□□□□ -0.81
CCDC78-209ENST00000474647 IGLC1P0CG04 106 aa10□□□□□ -0.81
CCDC78-209ENST00000474647 HLA-DRB4P13762 266 aa10□□□□□ -0.81
CCDC78-209ENST00000474647 HTR2BP41595 481 aa10□□□□□ -0.81
CCDC78-209ENST00000474647 BSXQ3C1V8 233 aa10□□□□□ -0.81
CCDC78-209ENST00000474647 SOHLH1Q5JUK2 328 aa10□□□□□ -0.81
CCDC78-209ENST00000474647 GGNBP1Q5YKI7 109 aa10□□□□□ -0.81
CCDC78-209ENST00000474647 Q6ZRM9 215 aa10□□□□□ -0.81
CCDC78-209ENST00000474647 GPR146Q96CH1 333 aa10□□□□□ -0.81
CCDC78-209ENST00000474647 HLA-DRB4X5D2U9 266 aa10□□□□□ -0.81
CCDC78-209ENST00000474647 TMEM189A5PLL7 270 aa9.99□□□□□ -0.81
CCDC78-209ENST00000474647 SLC25A6P12236 298 aa9.99□□□□□ -0.81
CCDC78-209ENST00000474647 DEFB1P60022 68 aa9.99□□□□□ -0.81
CCDC78-209ENST00000474647 SPCS3P61009 180 aa9.99□□□□□ -0.81
CCDC78-209ENST00000474647 AARDQ4LEZ3 155 aa9.99□□□□□ -0.81
CCDC78-209ENST00000474647 GDF5OSQ5U4N7 250 aa9.99□□□□□ -0.81
CCDC78-209ENST00000474647 PRSS54Q6PEW0 395 aa9.99□□□□□ -0.81
CCDC78-209ENST00000474647 ZNF705AQ6ZN79 300 aaPredicted RBP9.99□□□□□ -0.81
CCDC78-209ENST00000474647 KRTAP4-5Q9BYR2 181 aa9.99□□□□□ -0.81
CCDC78-209ENST00000474647 CACNG5Q9UF02 275 aa9.99□□□□□ -0.81
CCDC78-209ENST00000474647 HSPG2P98160 4391 aa9.99□□□□□ -0.81
CCDC78-209ENST00000474647 CEBPZOSA8MTT3 80 aa9.98□□□□□ -0.81
CCDC78-209ENST00000474647 CCSO14618 274 aa9.98□□□□□ -0.81
CCDC78-209ENST00000474647 SSNA1O43805 119 aa9.98□□□□□ -0.81
CCDC78-209ENST00000474647 NXPH3O95157 252 aa9.98□□□□□ -0.81
CCDC78-209ENST00000474647 SULT1A3P0DMM9 295 aa9.98□□□□□ -0.81
CCDC78-209ENST00000474647 SULT1A4P0DMN0 295 aa9.98□□□□□ -0.81
CCDC78-209ENST00000474647 SLC25A4P12235 298 aa9.98□□□□□ -0.81
CCDC78-209ENST00000474647 YPEL3P61236 119 aaPredicted RBP9.98□□□□□ -0.81
CCDC78-209ENST00000474647 SMCO1Q147U7 214 aa9.98□□□□□ -0.81
CCDC78-209ENST00000474647 FAM222AQ5U5X8 452 aa9.98□□□□□ -0.81
CCDC78-209ENST00000474647 Q6ZR54 194 aa9.98□□□□□ -0.81
CCDC78-209ENST00000474647 SLC24A4Q8NFF2 622 aa9.98□□□□□ -0.81
CCDC78-209ENST00000474647 ACY3Q96HD9 319 aa9.98□□□□□ -0.81
CCDC78-209ENST00000474647 LINC00052Q96N35 136 aa9.98□□□□□ -0.81
CCDC78-209ENST00000474647 NEU1Q99519 415 aa9.98□□□□□ -0.81
CCDC78-209ENST00000474647 NIPSNAP3BQ9BS92 247 aa9.98□□□□□ -0.81
CCDC78-209ENST00000474647 RFNGQ9Y644 331 aa9.98□□□□□ -0.81
CCDC78-209ENST00000474647 SMIM9A6NGZ8 99 aa9.97□□□□□ -0.81
CCDC78-209ENST00000474647 ZNF705FA8MVS1 300 aaPredicted RBP9.97□□□□□ -0.81
CCDC78-209ENST00000474647 BOLA2-SMG1P6H3BVE0 249 aa9.97□□□□□ -0.81
CCDC78-209ENST00000474647 BUB3O43684 328 aa9.97□□□□□ -0.81
CCDC78-209ENST00000474647 PITX3O75364 302 aa9.97□□□□□ -0.81
CCDC78-209ENST00000474647 ZNF705DP0CH99 300 aaPredicted RBP9.97□□□□□ -0.81
CCDC78-209ENST00000474647 ZNF705BP0CI00 300 aaPredicted RBP9.97□□□□□ -0.81
CCDC78-209ENST00000474647 C2orf83Q53S99 150 aa9.97□□□□□ -0.81
CCDC78-209ENST00000474647 C1orf134Q5TEV5 83 aa9.97□□□□□ -0.81
CCDC78-209ENST00000474647 OR4B1Q8NGF8 309 aa9.97□□□□□ -0.81
CCDC78-209ENST00000474647 RNASEH2CQ8TDP1 164 aaKnown RBP9.97□□□□□ -0.81
CCDC78-209ENST00000474647 NPIPB3Q92617 1050 aa9.97□□□□□ -0.81
CCDC78-209ENST00000474647 PBDC1Q9BVG4 233 aa9.97□□□□□ -0.81
CCDC78-209ENST00000474647 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.97□□□□□ -0.81
CCDC78-209ENST00000474647 PLA2G2EQ9NZK7 142 aa9.97□□□□□ -0.81
CCDC78-209ENST00000474647 DKK2Q9UBU2 259 aa9.97□□□□□ -0.81
CCDC78-209ENST00000474647 TEX48A0A1B0GUV7 120 aa9.96□□□□□ -0.82
CCDC78-209ENST00000474647 GOSR2O14653 212 aa9.96□□□□□ -0.82
CCDC78-209ENST00000474647 TOMM40O96008 361 aa9.96□□□□□ -0.82
CCDC78-209ENST00000474647 RD3LP0DJH9 198 aa9.96□□□□□ -0.82
CCDC78-209ENST00000474647 NKX2-1P43699 371 aaPredicted RBP9.96□□□□□ -0.82
CCDC78-209ENST00000474647 ETFRF1Q6IPR1 90 aa9.96□□□□□ -0.82
CCDC78-209ENST00000474647 OR51G1Q8NGK1 321 aa9.96□□□□□ -0.82
CCDC78-209ENST00000474647 OR52E5Q8NH55 327 aa9.96□□□□□ -0.82
CCDC78-209ENST00000474647 FAM210BQ96KR6 192 aa9.96□□□□□ -0.82
CCDC78-209ENST00000474647 SEPSECSQ9HD40 501 aaKnown RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms