RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 PRR20EP86478 221 aa7.99□□□□□ -1.13
COL12A1-206ENST00000474564 PRR20CP86479 221 aa7.99□□□□□ -1.13
COL12A1-206ENST00000474564 PRR20DP86480 221 aa7.99□□□□□ -1.13
COL12A1-206ENST00000474564 PRR20BP86481 221 aa7.99□□□□□ -1.13
COL12A1-206ENST00000474564 PRR20AP86496 221 aa7.99□□□□□ -1.13
COL12A1-206ENST00000474564 KIAA0141Q14154 515 aaPredicted RBP7.99□□□□□ -1.13
COL12A1-206ENST00000474564 NSUN5P1Q3KNT7 163 aa7.99□□□□□ -1.13
COL12A1-206ENST00000474564 TOR2AQ5JU69 321 aa7.99□□□□□ -1.13
COL12A1-206ENST00000474564 UQCC3Q6UW78 93 aa7.99□□□□□ -1.13
COL12A1-206ENST00000474564 SHISA2Q6UWI4 295 aa7.99□□□□□ -1.13
COL12A1-206ENST00000474564 C1QL4Q86Z23 238 aa7.99□□□□□ -1.13
COL12A1-206ENST00000474564 STXBP6Q8NFX7 210 aa7.99□□□□□ -1.13
COL12A1-206ENST00000474564 WIPF2Q8TF74 440 aaPredicted RBP7.99□□□□□ -1.13
COL12A1-206ENST00000474564 RCC1LQ96I51 464 aaKnown RBP7.99□□□□□ -1.13
COL12A1-206ENST00000474564 CHRDL1Q9BU40 450 aa7.99□□□□□ -1.13
COL12A1-206ENST00000474564 ELOVL1Q9BW60 279 aa7.99□□□□□ -1.13
COL12A1-206ENST00000474564 VSIRQ9H7M9 311 aa7.99□□□□□ -1.13
COL12A1-206ENST00000474564 SETXQ7Z333 2677 aaKnown RBP7.98□□□□□ -1.13
COL12A1-206ENST00000474564 IGHV3-35A0A0C4DH35 117 aa7.98□□□□□ -1.13
COL12A1-206ENST00000474564 WI2-2373I1.2A0A1W2PRP0 233 aa7.98□□□□□ -1.13
COL12A1-206ENST00000474564 F8W735 103 aaPredicted RBP7.98□□□□□ -1.13
COL12A1-206ENST00000474564 K7EMT4 169 aa7.98□□□□□ -1.13
COL12A1-206ENST00000474564 HMGB3O15347 200 aaKnown RBP7.98□□□□□ -1.13
COL12A1-206ENST00000474564 ADMP35318 185 aa7.98□□□□□ -1.13
COL12A1-206ENST00000474564 PPT1P50897 306 aa7.98□□□□□ -1.13
COL12A1-206ENST00000474564 PLP1P60201 277 aa7.98□□□□□ -1.13
COL12A1-206ENST00000474564 KRTAP24-1Q3LI83 254 aa7.98□□□□□ -1.13
COL12A1-206ENST00000474564 TCTEX1D4Q5JR98 221 aa7.98□□□□□ -1.13
COL12A1-206ENST00000474564 FAM78BQ5VT40 261 aa7.98□□□□□ -1.13
COL12A1-206ENST00000474564 TOMM20LQ6UXN7 152 aa7.98□□□□□ -1.13
COL12A1-206ENST00000474564 C8orf86Q6ZUL3 223 aa7.98□□□□□ -1.13
COL12A1-206ENST00000474564 PRIMA1Q86XR5 153 aa7.98□□□□□ -1.13
COL12A1-206ENST00000474564 GPR82Q96P67 336 aa7.98□□□□□ -1.13
COL12A1-206ENST00000474564 DAZ1Q9NQZ3 744 aaKnown RBP7.98□□□□□ -1.13
COL12A1-206ENST00000474564 TECRQ9NZ01 308 aaKnown RBP7.98□□□□□ -1.13
COL12A1-206ENST00000474564 DOK5Q9P104 306 aa7.98□□□□□ -1.13
COL12A1-206ENST00000474564 GNG13Q9P2W3 67 aa7.98□□□□□ -1.13
COL12A1-206ENST00000474564 IGHV4OR15-8A0A075B7B6 117 aa7.97□□□□□ -1.13
COL12A1-206ENST00000474564 A0A087WW49 117 aa7.97□□□□□ -1.13
COL12A1-206ENST00000474564 LGALS9O00182 355 aa7.97□□□□□ -1.13
COL12A1-206ENST00000474564 CD5P06127 495 aa7.97□□□□□ -1.13
COL12A1-206ENST00000474564 GATA2P23769 480 aaPredicted RBP7.97□□□□□ -1.13
COL12A1-206ENST00000474564 HOXD3P31249 432 aaPredicted RBP7.97□□□□□ -1.13
COL12A1-206ENST00000474564 CEBPGP53567 150 aa7.97□□□□□ -1.13
COL12A1-206ENST00000474564 GUK1Q16774 197 aa7.97□□□□□ -1.13
COL12A1-206ENST00000474564 HAGHQ16775 308 aa7.97□□□□□ -1.13
COL12A1-206ENST00000474564 KHDC3LQ587J8 217 aa7.97□□□□□ -1.13
COL12A1-206ENST00000474564 LINC00305Q7Z4B0 112 aa7.97□□□□□ -1.13
COL12A1-206ENST00000474564 RAB24Q969Q5 203 aa7.97□□□□□ -1.13
COL12A1-206ENST00000474564 ZNF747Q9BV97 191 aa7.97□□□□□ -1.13
COL12A1-206ENST00000474564 PLA2G2EQ9NZK7 142 aa7.97□□□□□ -1.13
COL12A1-206ENST00000474564 FUT9Q9Y231 359 aa7.97□□□□□ -1.13
COL12A1-206ENST00000474564 FN1P02751 2386 aaKnown RBP7.97□□□□□ -1.13
COL12A1-206ENST00000474564 VPS13CQ709C8 3753 aa7.96□□□□□ -1.14
COL12A1-206ENST00000474564 KRBOX1C9JBD0 128 aa7.96□□□□□ -1.14
COL12A1-206ENST00000474564 OR7C2O60412 319 aa7.96□□□□□ -1.14
COL12A1-206ENST00000474564 CXorf1O96002 111 aa7.96□□□□□ -1.14
COL12A1-206ENST00000474564 TRBV12-3P01733 135 aa7.96□□□□□ -1.14
COL12A1-206ENST00000474564 C8orf88P0DMB2 117 aa7.96□□□□□ -1.14
COL12A1-206ENST00000474564 PSMB3P49720 205 aa7.96□□□□□ -1.14
COL12A1-206ENST00000474564 RIPPLY3P57055 190 aa7.96□□□□□ -1.14
COL12A1-206ENST00000474564 SYNJ2BPP57105 145 aa7.96□□□□□ -1.14
COL12A1-206ENST00000474564 C1orf194Q5T5A4 169 aa7.96□□□□□ -1.14
COL12A1-206ENST00000474564 REC114Q7Z4M0 266 aa7.96□□□□□ -1.14
COL12A1-206ENST00000474564 BPIFA4PQ86YQ2 179 aa7.96□□□□□ -1.14
COL12A1-206ENST00000474564 OR8I2Q8N0Y5 310 aa7.96□□□□□ -1.14
COL12A1-206ENST00000474564 TMEM190Q8WZ59 177 aa7.96□□□□□ -1.14
COL12A1-206ENST00000474564 FAM210AQ96ND0 272 aa7.96□□□□□ -1.14
COL12A1-206ENST00000474564 MANBALQ9NQG1 85 aa7.96□□□□□ -1.14
COL12A1-206ENST00000474564 MRPL27Q9P0M9 148 aaKnown RBP7.96□□□□□ -1.14
COL12A1-206ENST00000474564 HELTA6NFD8 242 aa7.95□□□□□ -1.14
COL12A1-206ENST00000474564 RBFOX3A6NFN3 312 aa7.95□□□□□ -1.14
COL12A1-206ENST00000474564 F8W036 122 aa7.95□□□□□ -1.14
COL12A1-206ENST00000474564 RPL7P18124 248 aaKnown RBP7.95□□□□□ -1.14
COL12A1-206ENST00000474564 TAGLN2P37802 199 aaKnown RBP7.95□□□□□ -1.14
COL12A1-206ENST00000474564 GALR1P47211 349 aa7.95□□□□□ -1.14
COL12A1-206ENST00000474564 KLF5Q13887 457 aaPredicted RBP7.95□□□□□ -1.14
COL12A1-206ENST00000474564 DEFB136Q30KP8 78 aa7.95□□□□□ -1.14
COL12A1-206ENST00000474564 GCSAMLQ5JQS6 135 aa7.95□□□□□ -1.14
COL12A1-206ENST00000474564 PQLC2Q6ZP29 291 aa7.95□□□□□ -1.14
COL12A1-206ENST00000474564 RPP25LQ8N5L8 163 aaKnown RBP7.95□□□□□ -1.14
COL12A1-206ENST00000474564 MBD3L1Q8WWY6 194 aa7.95□□□□□ -1.14
COL12A1-206ENST00000474564 CITED1Q99966 193 aa7.95□□□□□ -1.14
COL12A1-206ENST00000474564 SLC25A39Q9BZJ4 359 aaPredicted RBP7.95□□□□□ -1.14
COL12A1-206ENST00000474564 TRAV1-1A0A0B4J248 108 aa7.94□□□□□ -1.14
COL12A1-206ENST00000474564 ZNF785A8K8V0 405 aa7.94□□□□□ -1.14
COL12A1-206ENST00000474564 SEC14L6B5MCN3 397 aa7.94□□□□□ -1.14
COL12A1-206ENST00000474564 OVOL1O14753 267 aa7.94□□□□□ -1.14
COL12A1-206ENST00000474564 EIF3GO75821 320 aaKnown RBP eCLIP7.94□□□□□ -1.14
COL12A1-206ENST00000474564 ARL14EPLP0DKL9 152 aa7.94□□□□□ -1.14
COL12A1-206ENST00000474564 ATF4P18848 351 aaPredicted RBP7.94□□□□□ -1.14
COL12A1-206ENST00000474564 CRYBB3P26998 211 aa7.94□□□□□ -1.14
COL12A1-206ENST00000474564 MEOX2P50222 304 aa7.94□□□□□ -1.14
COL12A1-206ENST00000474564 RPL11P62913 178 aaKnown RBP7.94□□□□□ -1.14
COL12A1-206ENST00000474564 PAFAH1B2P68402 229 aa7.94□□□□□ -1.14
COL12A1-206ENST00000474564 ZNF726P1Q15940 193 aa7.94□□□□□ -1.14
COL12A1-206ENST00000474564 LURAP1LQ8IV03 231 aa7.94□□□□□ -1.14
COL12A1-206ENST00000474564 EIF4E3Q8N5X7 224 aaKnown RBP7.94□□□□□ -1.14
COL12A1-206ENST00000474564 OR9G4Q8NGQ1 327 aa7.94□□□□□ -1.14
COL12A1-206ENST00000474564 RXFP4Q8TDU9 374 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms