RNA–Protein interactions for RNA: ENST00000474412.1

VPS50-211, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-211ENST00000474412 PRSS54Q6PEW0 395 aa5.07□□□□□ -1.6
VPS50-211ENST00000474412 LYG2Q86SG7 212 aa5.07□□□□□ -1.6
VPS50-211ENST00000474412 CCDC190Q86UF4 302 aa5.07□□□□□ -1.6
VPS50-211ENST00000474412 DUSP18Q8NEJ0 188 aa5.07□□□□□ -1.6
VPS50-211ENST00000474412 GALNT14Q96FL9 552 aa5.07□□□□□ -1.6
VPS50-211ENST00000474412 SDHCQ99643 169 aaPredicted RBP5.07□□□□□ -1.6
VPS50-211ENST00000474412 TXN2Q99757 166 aa5.07□□□□□ -1.6
VPS50-211ENST00000474412 SRRQ9GZT4 340 aa5.07□□□□□ -1.6
VPS50-211ENST00000474412 MS4A6AQ9H2W1 248 aa5.07□□□□□ -1.6
VPS50-211ENST00000474412 RBKSQ9H477 322 aa5.07□□□□□ -1.6
VPS50-211ENST00000474412 ENY2Q9NPA8 101 aa5.07□□□□□ -1.6
VPS50-211ENST00000474412 TMEM56-RWDD3S4R434 201 aa5.07□□□□□ -1.6
VPS50-211ENST00000474412 TRAV14DV4A0A0A6YYC5 116 aa5.06□□□□□ -1.6
VPS50-211ENST00000474412 CORTO00230 105 aa5.06□□□□□ -1.6
VPS50-211ENST00000474412 BUB3O43684 328 aa5.06□□□□□ -1.6
VPS50-211ENST00000474412 SULT1A3P0DMM9 295 aa5.06□□□□□ -1.6
VPS50-211ENST00000474412 SULT1A4P0DMN0 295 aa5.06□□□□□ -1.6
VPS50-211ENST00000474412 IAPPP10997 89 aa5.06□□□□□ -1.6
VPS50-211ENST00000474412 C4BPBP20851 252 aa5.06□□□□□ -1.6
VPS50-211ENST00000474412 MT3P25713 68 aa5.06□□□□□ -1.6
VPS50-211ENST00000474412 BTCP35070 178 aa5.06□□□□□ -1.6
VPS50-211ENST00000474412 P2RY1P47900 373 aa5.06□□□□□ -1.6
VPS50-211ENST00000474412 NPBWR1P48145 328 aa5.06□□□□□ -1.6
VPS50-211ENST00000474412 CCR6P51684 374 aa5.06□□□□□ -1.6
VPS50-211ENST00000474412 DEFB131AP59861 70 aa5.06□□□□□ -1.6
VPS50-211ENST00000474412 DEFB1P60022 68 aa5.06□□□□□ -1.6
VPS50-211ENST00000474412 DHODHQ02127 395 aa5.06□□□□□ -1.6
VPS50-211ENST00000474412 PPP1R1AQ13522 171 aa5.06□□□□□ -1.6
VPS50-211ENST00000474412 C2orf83Q53S99 150 aa5.06□□□□□ -1.6
VPS50-211ENST00000474412 PYDC2Q56P42 97 aa5.06□□□□□ -1.6
VPS50-211ENST00000474412 SERTAD4-AS1Q5TG53 156 aa5.06□□□□□ -1.6
VPS50-211ENST00000474412 STXBP6Q8NFX7 210 aa5.06□□□□□ -1.6
VPS50-211ENST00000474412 OR4X1Q8NH49 305 aa5.06□□□□□ -1.6
VPS50-211ENST00000474412 OR52E5Q8NH55 327 aa5.06□□□□□ -1.6
VPS50-211ENST00000474412 ACY3Q96HD9 319 aa5.06□□□□□ -1.6
VPS50-211ENST00000474412 GINS3Q9BRX5 216 aa5.06□□□□□ -1.6
VPS50-211ENST00000474412 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.06□□□□□ -1.6
VPS50-211ENST00000474412 HSPB7Q9UBY9 170 aa5.06□□□□□ -1.6
VPS50-211ENST00000474412 RSL24D1Q9UHA3 163 aaKnown RBP5.06□□□□□ -1.6
VPS50-211ENST00000474412 RABAC1Q9UI14 185 aa5.06□□□□□ -1.6
VPS50-211ENST00000474412 SCP2D1Q9UJQ7 156 aa5.06□□□□□ -1.6
VPS50-211ENST00000474412 EPPK1P58107 5090 aaKnown RBP5.06□□□□□ -1.6
VPS50-211ENST00000474412 IGKV1D-37A0A075B6S9 117 aa5.05□□□□□ -1.6
VPS50-211ENST00000474412 A0A0B4J2A0 478 aa5.05□□□□□ -1.6
VPS50-211ENST00000474412 KNCNA6PVL3 124 aa5.05□□□□□ -1.6
VPS50-211ENST00000474412 MPTX1A8MV57 137 aa5.05□□□□□ -1.6
VPS50-211ENST00000474412 H3BP45 60 aa5.05□□□□□ -1.6
VPS50-211ENST00000474412 K7EQG2 157 aa5.05□□□□□ -1.6
VPS50-211ENST00000474412 DEFB4AO15263 64 aa5.05□□□□□ -1.6
VPS50-211ENST00000474412 B3GALNT1O75752 331 aa5.05□□□□□ -1.6
VPS50-211ENST00000474412 ATG12O94817 140 aa5.05□□□□□ -1.6
VPS50-211ENST00000474412 NDUFB4O95168 129 aa5.05□□□□□ -1.6
VPS50-211ENST00000474412 IGKV3-20P01619 116 aa5.05□□□□□ -1.6
VPS50-211ENST00000474412 ZNF688P0C7X2 276 aa5.05□□□□□ -1.6
VPS50-211ENST00000474412 HTR2BP41595 481 aa5.05□□□□□ -1.6
VPS50-211ENST00000474412 APOC4P55056 127 aa5.05□□□□□ -1.6
VPS50-211ENST00000474412 SMCO1Q147U7 214 aa5.05□□□□□ -1.6
VPS50-211ENST00000474412 BAK1Q16611 211 aa5.05□□□□□ -1.6
VPS50-211ENST00000474412 TOMM5Q8N4H5 51 aa5.05□□□□□ -1.6
VPS50-211ENST00000474412 DTD1Q8TEA8 209 aa5.05□□□□□ -1.6
VPS50-211ENST00000474412 DCANP1Q8TF63 244 aa5.05□□□□□ -1.6
VPS50-211ENST00000474412 IL22RA2Q969J5 263 aa5.05□□□□□ -1.6
VPS50-211ENST00000474412 SHPKQ9UHJ6 478 aa5.05□□□□□ -1.6
VPS50-211ENST00000474412 FLVCR2Q9UPI3 526 aa5.05□□□□□ -1.6
VPS50-211ENST00000474412 IGKV1OR2-108A0A075B7D4 117 aa5.04□□□□□ -1.6
VPS50-211ENST00000474412 LINC00854A0A1B0GVQ3 168 aa5.04□□□□□ -1.6
VPS50-211ENST00000474412 PRSS46E5RG02 174 aa5.04□□□□□ -1.6
VPS50-211ENST00000474412 PITX3O75364 302 aa5.04□□□□□ -1.6
VPS50-211ENST00000474412 ADAP1O75689 374 aa5.04□□□□□ -1.6
VPS50-211ENST00000474412 GAGE7O76087 117 aa5.04□□□□□ -1.6
VPS50-211ENST00000474412 CA1P00915 261 aaPredicted RBP5.04□□□□□ -1.6
VPS50-211ENST00000474412 IFNA10P01566 189 aa5.04□□□□□ -1.6
VPS50-211ENST00000474412 IL4P05112 153 aa5.04□□□□□ -1.6
VPS50-211ENST00000474412 GIG44P09565 113 aaPredicted RBP5.04□□□□□ -1.6
VPS50-211ENST00000474412 GAGE12FP0CL80 117 aa5.04□□□□□ -1.6
VPS50-211ENST00000474412 GAGE12GP0CL81 117 aa5.04□□□□□ -1.6
VPS50-211ENST00000474412 GAGE12IP0CL82 117 aa5.04□□□□□ -1.6
VPS50-211ENST00000474412 CRYBB3P26998 211 aa5.04□□□□□ -1.6
VPS50-211ENST00000474412 OR10J1P30954 320 aa5.04□□□□□ -1.6
VPS50-211ENST00000474412 SUB1P53999 127 aaKnown RBP eCLIP5.04□□□□□ -1.6
VPS50-211ENST00000474412 UBE2MP61081 183 aaKnown RBP5.04□□□□□ -1.6
VPS50-211ENST00000474412 ZNF90Q03938 601 aa5.04□□□□□ -1.6
VPS50-211ENST00000474412 GAGE1Q13065 139 aa5.04□□□□□ -1.6
VPS50-211ENST00000474412 GAGE4Q13068 117 aa5.04□□□□□ -1.6
VPS50-211ENST00000474412 LGI3Q8N145 548 aa5.04□□□□□ -1.6
VPS50-211ENST00000474412 OR1S2Q8NGQ3 325 aa5.04□□□□□ -1.6
VPS50-211ENST00000474412 OR1S1Q8NH92 325 aa5.04□□□□□ -1.6
VPS50-211ENST00000474412 METTL26Q96S19 204 aa5.04□□□□□ -1.6
VPS50-211ENST00000474412 MAGT1Q9H0U3 335 aa5.04□□□□□ -1.6
VPS50-211ENST00000474412 RABL2AQ9UBK7 228 aaPredicted RBP5.04□□□□□ -1.6
VPS50-211ENST00000474412 RABL2BQ9UNT1 228 aa5.04□□□□□ -1.6
VPS50-211ENST00000474412 TP53TG1Q9Y2A0 90 aa5.04□□□□□ -1.6
VPS50-211ENST00000474412 NACAE9PAV3 2078 aa5.04□□□□□ -1.6
VPS50-211ENST00000474412 KIR2DL5BA0A0G2JN68 375 aa5.03□□□□□ -1.6
VPS50-211ENST00000474412 KIR2DL5BA0A0G2JPC4 375 aa5.03□□□□□ -1.6
VPS50-211ENST00000474412 DNASE2O00115 360 aaPredicted RBP5.03□□□□□ -1.6
VPS50-211ENST00000474412 CCNKO75909 580 aa5.03□□□□□ -1.6
VPS50-211ENST00000474412 SFT2D2O95562 160 aa5.03□□□□□ -1.6
VPS50-211ENST00000474412 HOXB5P09067 269 aa5.03□□□□□ -1.6
VPS50-211ENST00000474412 NPPCP23582 126 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms