RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 CD28P10747 220 aa7.94□□□□□ -1.14
PRPF38A-202ENST00000474048 NPPCP23582 126 aa7.94□□□□□ -1.14
PRPF38A-202ENST00000474048 FHITP49789 147 aa7.94□□□□□ -1.14
PRPF38A-202ENST00000474048 PLP1P60201 277 aa7.94□□□□□ -1.14
PRPF38A-202ENST00000474048 GCSAMLQ5JQS6 135 aa7.94□□□□□ -1.14
PRPF38A-202ENST00000474048 IL34Q6ZMJ4 242 aa7.94□□□□□ -1.14
PRPF38A-202ENST00000474048 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.94□□□□□ -1.14
PRPF38A-202ENST00000474048 OR4F17Q8NGA8 305 aa7.94□□□□□ -1.14
PRPF38A-202ENST00000474048 OR4F4Q96R69 305 aa7.94□□□□□ -1.14
PRPF38A-202ENST00000474048 WI2-2373I1.2A0A1W2PRP0 233 aa7.93□□□□□ -1.14
PRPF38A-202ENST00000474048 ATF4P18848 351 aaPredicted RBP7.93□□□□□ -1.14
PRPF38A-202ENST00000474048 ADMP35318 185 aa7.93□□□□□ -1.14
PRPF38A-202ENST00000474048 TAGLN2P37802 199 aaKnown RBP7.93□□□□□ -1.14
PRPF38A-202ENST00000474048 PSMB3P49720 205 aa7.93□□□□□ -1.14
PRPF38A-202ENST00000474048 FGF8P55075 233 aaPredicted RBP7.93□□□□□ -1.14
PRPF38A-202ENST00000474048 PROK1P58294 105 aa7.93□□□□□ -1.14
PRPF38A-202ENST00000474048 UBE2L3P68036 154 aaKnown RBP7.93□□□□□ -1.14
PRPF38A-202ENST00000474048 TOMM20LQ6UXN7 152 aa7.93□□□□□ -1.14
PRPF38A-202ENST00000474048 BPIFA4PQ86YQ2 179 aa7.93□□□□□ -1.14
PRPF38A-202ENST00000474048 OR8I2Q8N0Y5 310 aa7.93□□□□□ -1.14
PRPF38A-202ENST00000474048 RPP25LQ8N5L8 163 aaKnown RBP7.93□□□□□ -1.14
PRPF38A-202ENST00000474048 OR11H1Q8NG94 326 aa7.93□□□□□ -1.14
PRPF38A-202ENST00000474048 OR1N2Q8NGR9 330 aa7.93□□□□□ -1.14
PRPF38A-202ENST00000474048 MYOZ3Q8TDC0 251 aa7.93□□□□□ -1.14
PRPF38A-202ENST00000474048 GPR82Q96P67 336 aa7.93□□□□□ -1.14
PRPF38A-202ENST00000474048 UHRF2Q96PU4 802 aa7.93□□□□□ -1.14
PRPF38A-202ENST00000474048 ELOVL1Q9BW60 279 aa7.93□□□□□ -1.14
PRPF38A-202ENST00000474048 SLC25A39Q9BZJ4 359 aaPredicted RBP7.93□□□□□ -1.14
PRPF38A-202ENST00000474048 EIF5A2Q9GZV4 153 aaKnown RBP7.93□□□□□ -1.14
PRPF38A-202ENST00000474048 MANBALQ9NQG1 85 aa7.93□□□□□ -1.14
PRPF38A-202ENST00000474048 DAZ1Q9NQZ3 744 aaKnown RBP7.93□□□□□ -1.14
PRPF38A-202ENST00000474048 TMEM167BQ9NRX6 74 aa7.93□□□□□ -1.14
PRPF38A-202ENST00000474048 PEMTQ9UBM1 199 aa7.93□□□□□ -1.14
PRPF38A-202ENST00000474048 NSD1Q96L73 2696 aaPredicted RBP7.93□□□□□ -1.14
PRPF38A-202ENST00000474048 MXRA5Q9NR99 2828 aa7.93□□□□□ -1.14
PRPF38A-202ENST00000474048 SVEP1Q4LDE5 3571 aa7.92□□□□□ -1.14
PRPF38A-202ENST00000474048 IGHV4OR15-8A0A075B7B6 117 aa7.92□□□□□ -1.14
PRPF38A-202ENST00000474048 IGHV3OR16-8A0A075B7F1 116 aa7.92□□□□□ -1.14
PRPF38A-202ENST00000474048 A0A087WW49 117 aa7.92□□□□□ -1.14
PRPF38A-202ENST00000474048 TRBV12-3P01733 135 aa7.92□□□□□ -1.14
PRPF38A-202ENST00000474048 PF4P02776 101 aa7.92□□□□□ -1.14
PRPF38A-202ENST00000474048 ARL14EPLP0DKL9 152 aa7.92□□□□□ -1.14
PRPF38A-202ENST00000474048 RPL7P18124 248 aaKnown RBP7.92□□□□□ -1.14
PRPF38A-202ENST00000474048 GALR1P47211 349 aa7.92□□□□□ -1.14
PRPF38A-202ENST00000474048 USF2Q15853 346 aaPredicted RBP7.92□□□□□ -1.14
PRPF38A-202ENST00000474048 NSUN5P1Q3KNT7 163 aa7.92□□□□□ -1.14
PRPF38A-202ENST00000474048 C8orf86Q6ZUL3 223 aa7.92□□□□□ -1.14
PRPF38A-202ENST00000474048 MIR17HGQ75NE6 70 aa7.92□□□□□ -1.14
PRPF38A-202ENST00000474048 COMMD7Q86VX2 200 aa7.92□□□□□ -1.14
PRPF38A-202ENST00000474048 NDUFA11Q86Y39 141 aa7.92□□□□□ -1.14
PRPF38A-202ENST00000474048 GPHB5Q86YW7 130 aa7.92□□□□□ -1.14
PRPF38A-202ENST00000474048 C1QL4Q86Z23 238 aa7.92□□□□□ -1.14
PRPF38A-202ENST00000474048 MBD3L1Q8WWY6 194 aa7.92□□□□□ -1.14
PRPF38A-202ENST00000474048 TMEM37Q8WXS4 190 aa7.92□□□□□ -1.14
PRPF38A-202ENST00000474048 TMEM190Q8WZ59 177 aa7.92□□□□□ -1.14
PRPF38A-202ENST00000474048 CITED2Q99967 270 aaPredicted RBP7.92□□□□□ -1.14
PRPF38A-202ENST00000474048 SHANK2-AS3Q9BTD1 123 aa7.92□□□□□ -1.14
PRPF38A-202ENST00000474048 PAXXQ9BUH6 204 aa7.92□□□□□ -1.14
PRPF38A-202ENST00000474048 OR51M1Q9H341 326 aa7.92□□□□□ -1.14
PRPF38A-202ENST00000474048 SEPSECSQ9HD40 501 aaKnown RBP7.92□□□□□ -1.14
PRPF38A-202ENST00000474048 GNG13Q9P2W3 67 aa7.92□□□□□ -1.14
PRPF38A-202ENST00000474048 FN1P02751 2386 aaKnown RBP7.91□□□□□ -1.14
PRPF38A-202ENST00000474048 TRAV1-1A0A0B4J248 108 aa7.91□□□□□ -1.14
PRPF38A-202ENST00000474048 H3BRN7 92 aa7.91□□□□□ -1.14
PRPF38A-202ENST00000474048 I3L521 148 aa7.91□□□□□ -1.14
PRPF38A-202ENST00000474048 ZNF207O43670 478 aaKnown RBP7.91□□□□□ -1.14
PRPF38A-202ENST00000474048 STAG3L2P0CL84 134 aa7.91□□□□□ -1.14
PRPF38A-202ENST00000474048 STAG3L3P0CL85 134 aa7.91□□□□□ -1.14
PRPF38A-202ENST00000474048 GCHFRP30047 84 aa7.91□□□□□ -1.14
PRPF38A-202ENST00000474048 HOXD3P31249 432 aaPredicted RBP7.91□□□□□ -1.14
PRPF38A-202ENST00000474048 PEA15Q15121 130 aa7.91□□□□□ -1.14
PRPF38A-202ENST00000474048 DEFB136Q30KP8 78 aa7.91□□□□□ -1.14
PRPF38A-202ENST00000474048 TMEM158Q8WZ71 300 aa7.91□□□□□ -1.14
PRPF38A-202ENST00000474048 MARC2Q969Z3 335 aa7.91□□□□□ -1.14
PRPF38A-202ENST00000474048 SCRT1Q9BWW7 348 aa7.91□□□□□ -1.14
PRPF38A-202ENST00000474048 ZFAND3Q9H8U3 227 aa7.91□□□□□ -1.14
PRPF38A-202ENST00000474048 MRPL27Q9P0M9 148 aaKnown RBP7.91□□□□□ -1.14
PRPF38A-202ENST00000474048 ZNF98A6NK75 572 aa7.9□□□□□ -1.14
PRPF38A-202ENST00000474048 ZNF785A8K8V0 405 aa7.9□□□□□ -1.14
PRPF38A-202ENST00000474048 CCL24O00175 119 aa7.9□□□□□ -1.14
PRPF38A-202ENST00000474048 OR10J4P0C629 311 aa7.9□□□□□ -1.14
PRPF38A-202ENST00000474048 SYNJ2BPP57105 145 aa7.9□□□□□ -1.14
PRPF38A-202ENST00000474048 RPL11P62913 178 aaKnown RBP7.9□□□□□ -1.14
PRPF38A-202ENST00000474048 ZNF726P1Q15940 193 aa7.9□□□□□ -1.14
PRPF38A-202ENST00000474048 AWAT1Q58HT5 328 aa7.9□□□□□ -1.14
PRPF38A-202ENST00000474048 C1orf194Q5T5A4 169 aa7.9□□□□□ -1.14
PRPF38A-202ENST00000474048 SPATA31B1PQ5VZV4 182 aa7.9□□□□□ -1.14
PRPF38A-202ENST00000474048 CST9LP1Q5W188 147 aa7.9□□□□□ -1.14
PRPF38A-202ENST00000474048 LEMD1Q68G75 181 aa7.9□□□□□ -1.14
PRPF38A-202ENST00000474048 PATE2Q6UY27 113 aa7.9□□□□□ -1.14
PRPF38A-202ENST00000474048 DYNLRB2Q8TF09 96 aa7.9□□□□□ -1.14
PRPF38A-202ENST00000474048 TREM1Q9NP99 234 aa7.9□□□□□ -1.14
PRPF38A-202ENST00000474048 PLA2G2EQ9NZK7 142 aa7.9□□□□□ -1.14
PRPF38A-202ENST00000474048 RAB19A4D1S5 217 aa7.89□□□□□ -1.15
PRPF38A-202ENST00000474048 HELTA6NFD8 242 aa7.89□□□□□ -1.15
PRPF38A-202ENST00000474048 K7EMT4 169 aa7.89□□□□□ -1.15
PRPF38A-202ENST00000474048 LGALS9O00182 355 aa7.89□□□□□ -1.15
PRPF38A-202ENST00000474048 MEOX2P50222 304 aa7.89□□□□□ -1.15
PRPF38A-202ENST00000474048 SLURP1P55000 103 aa7.89□□□□□ -1.15
PRPF38A-202ENST00000474048 KIAA0141Q14154 515 aaPredicted RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms