RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 CD99P14209 185 aa2.62□□□□□ -1.99
BRCA1-212ENST00000473961 TSPOP30536 169 aa2.62□□□□□ -1.99
BRCA1-212ENST00000473961 GABRA3P34903 492 aa2.62□□□□□ -1.99
BRCA1-212ENST00000473961 PPP1CCP36873 323 aaKnown RBP2.62□□□□□ -1.99
BRCA1-212ENST00000473961 CRYBA4P53673 196 aa2.62□□□□□ -1.99
BRCA1-212ENST00000473961 CKS1BP61024 79 aa2.62□□□□□ -1.99
BRCA1-212ENST00000473961 LCN6P62502 163 aa2.62□□□□□ -1.99
BRCA1-212ENST00000473961 ATP5G2Q06055 141 aa2.62□□□□□ -1.99
BRCA1-212ENST00000473961 BAXQ07812 192 aa2.62□□□□□ -1.99
BRCA1-212ENST00000473961 ZNF816Q0VGE8 651 aaPredicted RBP2.62□□□□□ -1.99
BRCA1-212ENST00000473961 RAB31Q13636 194 aa2.62□□□□□ -1.99
BRCA1-212ENST00000473961 MSMO1Q15800 293 aa2.62□□□□□ -1.99
BRCA1-212ENST00000473961 PMCHL1Q16048 86 aa2.62□□□□□ -1.99
BRCA1-212ENST00000473961 TDRG1Q3Y452 100 aa2.62□□□□□ -1.99
BRCA1-212ENST00000473961 SPATA45Q537H7 98 aa2.62□□□□□ -1.99
BRCA1-212ENST00000473961 UNQ5815/PRO19632Q6UWF5 114 aa2.62□□□□□ -1.99
BRCA1-212ENST00000473961 GTF2H5Q6ZYL4 71 aa2.62□□□□□ -1.99
BRCA1-212ENST00000473961 TMEM144Q7Z5S9 345 aa2.62□□□□□ -1.99
BRCA1-212ENST00000473961 S100A7AQ86SG5 101 aa2.62□□□□□ -1.99
BRCA1-212ENST00000473961 PDPNQ86YL7 162 aa2.62□□□□□ -1.99
BRCA1-212ENST00000473961 GAPTQ8N292 157 aa2.62□□□□□ -1.99
BRCA1-212ENST00000473961 ZNF709Q8N972 641 aa2.62□□□□□ -1.99
BRCA1-212ENST00000473961 FER1L6-AS1Q8NA97 138 aa2.62□□□□□ -1.99
BRCA1-212ENST00000473961 OR11H1Q8NG94 326 aa2.62□□□□□ -1.99
BRCA1-212ENST00000473961 OR52R1Q8NGF1 315 aa2.62□□□□□ -1.99
BRCA1-212ENST00000473961 OR5A2Q8NGI9 324 aa2.62□□□□□ -1.99
BRCA1-212ENST00000473961 OR11H2Q8NH07 326 aa2.62□□□□□ -1.99
BRCA1-212ENST00000473961 CLDND2Q8NHS1 167 aa2.62□□□□□ -1.99
BRCA1-212ENST00000473961 CMTM2Q8TAZ6 248 aa2.62□□□□□ -1.99
BRCA1-212ENST00000473961 FNDC9Q8TBE3 224 aa2.62□□□□□ -1.99
BRCA1-212ENST00000473961 CIRBP-AS1Q8TBR5 109 aa2.62□□□□□ -1.99
BRCA1-212ENST00000473961 BLNKQ8WV28 456 aa2.62□□□□□ -1.99
BRCA1-212ENST00000473961 RAB8BQ92930 207 aa2.62□□□□□ -1.99
BRCA1-212ENST00000473961 WDR34Q96EX3 536 aa2.62□□□□□ -1.99
BRCA1-212ENST00000473961 SLC35G5Q96KT7 338 aa2.62□□□□□ -1.99
BRCA1-212ENST00000473961 WFDC6Q9BQY6 131 aa2.62□□□□□ -1.99
BRCA1-212ENST00000473961 EFCAB11Q9BUY7 163 aa2.62□□□□□ -1.99
BRCA1-212ENST00000473961 BANF2Q9H503 90 aa2.62□□□□□ -1.99
BRCA1-212ENST00000473961 GPR84Q9NQS5 396 aa2.62□□□□□ -1.99
BRCA1-212ENST00000473961 TMEM38BQ9NVV0 291 aa2.62□□□□□ -1.99
BRCA1-212ENST00000473961 SLC22A13Q9Y226 551 aa2.62□□□□□ -1.99
BRCA1-212ENST00000473961 ZNF780BQ9Y6R6 833 aa2.62□□□□□ -1.99
BRCA1-212ENST00000473961 ZNF831Q5JPB2 1677 aa2.62□□□□□ -1.99
BRCA1-212ENST00000473961 UBR3Q6ZT12 1888 aa2.62□□□□□ -1.99
BRCA1-212ENST00000473961 PLXNA1Q9UIW2 1896 aa2.62□□□□□ -1.99
BRCA1-212ENST00000473961 LCTP09848 1927 aa2.62□□□□□ -1.99
BRCA1-212ENST00000473961 GREB1Q4ZG55 1949 aa2.62□□□□□ -1.99
BRCA1-212ENST00000473961 SCN1AP35498 2009 aa2.61□□□□□ -1.99
BRCA1-212ENST00000473961 XIRP1Q702N8 1843 aaKnown RBP2.61□□□□□ -1.99
BRCA1-212ENST00000473961 LOC102724200A0A096LPH7 203 aaPredicted RBP2.61□□□□□ -1.99
BRCA1-212ENST00000473961 DUXBA0A1W2PPF3 345 aa2.61□□□□□ -1.99
BRCA1-212ENST00000473961 TMEM213A2RRL7 107 aa2.61□□□□□ -1.99
BRCA1-212ENST00000473961 ARL5CA6NH57 179 aa2.61□□□□□ -1.99
BRCA1-212ENST00000473961 KLRC4-KLRK1H3BQV0 150 aa2.61□□□□□ -1.99
BRCA1-212ENST00000473961 CDC42EP2O14613 210 aa2.61□□□□□ -1.99
BRCA1-212ENST00000473961 IFNA1P01562 189 aa2.61□□□□□ -1.99
BRCA1-212ENST00000473961 SERPINA7P05543 415 aa2.61□□□□□ -1.99
BRCA1-212ENST00000473961 CTSDP07339 412 aaPredicted RBP2.61□□□□□ -1.99
BRCA1-212ENST00000473961 IL9P15248 144 aa2.61□□□□□ -1.99
BRCA1-212ENST00000473961 AZU1P20160 251 aa2.61□□□□□ -1.99
BRCA1-212ENST00000473961 PRTN3P24158 256 aa2.61□□□□□ -1.99
BRCA1-212ENST00000473961 CMPK1P30085 196 aa2.61□□□□□ -1.99
BRCA1-212ENST00000473961 MPV17P39210 176 aa2.61□□□□□ -1.99
BRCA1-212ENST00000473961 HINT1P49773 126 aaPredicted RBP2.61□□□□□ -1.99
BRCA1-212ENST00000473961 FXYD6P3P58550 94 aa2.61□□□□□ -1.99
BRCA1-212ENST00000473961 CCL20P78556 96 aa2.61□□□□□ -1.99
BRCA1-212ENST00000473961 Q0VG73 95 aa2.61□□□□□ -1.99
BRCA1-212ENST00000473961 HIST3H3Q16695 136 aa2.61□□□□□ -1.99
BRCA1-212ENST00000473961 MPV17LQ2QL34 196 aa2.61□□□□□ -1.99
BRCA1-212ENST00000473961 IAH1Q2TAA2 248 aaPredicted RBP2.61□□□□□ -1.99
BRCA1-212ENST00000473961 CEACAM16Q2WEN9 425 aa2.61□□□□□ -1.99
BRCA1-212ENST00000473961 CEACAM21Q3KPI0 293 aa2.61□□□□□ -1.99
BRCA1-212ENST00000473961 MORN3Q6PF18 240 aaPredicted RBP2.61□□□□□ -1.99
BRCA1-212ENST00000473961 UNQ9165/PRO28630Q6UXU0 137 aa2.61□□□□□ -1.99
BRCA1-212ENST00000473961 CYP2G1PQ6ZSU1 146 aa2.61□□□□□ -1.99
BRCA1-212ENST00000473961 Q6ZT83 130 aa2.61□□□□□ -1.99
BRCA1-212ENST00000473961 TRAPPC6BQ86SZ2 158 aa2.61□□□□□ -1.99
BRCA1-212ENST00000473961 ZNF695Q8IW36 515 aa2.61□□□□□ -1.99
BRCA1-212ENST00000473961 MUC15Q8N387 334 aa2.61□□□□□ -1.99
BRCA1-212ENST00000473961 SIGLECL1Q8N7X8 197 aa2.61□□□□□ -1.99
BRCA1-212ENST00000473961 OR8A1Q8NGG7 326 aa2.61□□□□□ -1.99
BRCA1-212ENST00000473961 OR4P4Q8NGL7 312 aa2.61□□□□□ -1.99
BRCA1-212ENST00000473961 OR4K13Q8NH42 304 aa2.61□□□□□ -1.99
BRCA1-212ENST00000473961 SKA2Q8WVK7 121 aaPredicted RBP2.61□□□□□ -1.99
BRCA1-212ENST00000473961 FGF13Q92913 245 aa2.61□□□□□ -1.99
BRCA1-212ENST00000473961 SFRP2Q96HF1 295 aa2.61□□□□□ -1.99
BRCA1-212ENST00000473961 C18orf15Q96N68 181 aa2.61□□□□□ -1.99
BRCA1-212ENST00000473961 GPR82Q96P67 336 aa2.61□□□□□ -1.99
BRCA1-212ENST00000473961 SPACA5Q96QH8 159 aa2.61□□□□□ -1.99
BRCA1-212ENST00000473961 TSPAN32Q96QS1 320 aa2.61□□□□□ -1.99
BRCA1-212ENST00000473961 HSPB9Q9BQS6 159 aa2.61□□□□□ -1.99
BRCA1-212ENST00000473961 SMIM3Q9BZL3 60 aa2.61□□□□□ -1.99
BRCA1-212ENST00000473961 LPAR5Q9H1C0 372 aa2.61□□□□□ -1.99
BRCA1-212ENST00000473961 OR51I2Q9H344 312 aa2.61□□□□□ -1.99
BRCA1-212ENST00000473961 MANBALQ9NQG1 85 aa2.61□□□□□ -1.99
BRCA1-212ENST00000473961 CKLFQ9UBR5 152 aa2.61□□□□□ -1.99
BRCA1-212ENST00000473961 AK3Q9UIJ7 227 aa2.61□□□□□ -1.99
BRCA1-212ENST00000473961 MED31Q9Y3C7 131 aa2.61□□□□□ -1.99
BRCA1-212ENST00000473961 TRAPPC1Q9Y5R8 145 aa2.61□□□□□ -1.99
BRCA1-212ENST00000473961 PXMP4Q9Y6I8 212 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms