RNA–Protein interactions for RNA: ENST00000473602.1

SHROOM3-204, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 789 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-204ENST00000473602 RYR1P21817 5038 aa9.54□□□□□ -0.88
SHROOM3-204ENST00000473602 FNDC10F2Z333 226 aa9.53□□□□□ -0.88
SHROOM3-204ENST00000473602 S100A7P31151 101 aa9.53□□□□□ -0.88
SHROOM3-204ENST00000473602 PAX9P55771 341 aa9.53□□□□□ -0.88
SHROOM3-204ENST00000473602 LYZP61626 148 aa9.53□□□□□ -0.88
SHROOM3-204ENST00000473602 DLK1P80370 383 aa9.53□□□□□ -0.88
SHROOM3-204ENST00000473602 TMEM14EPQ6UXP3 125 aa9.53□□□□□ -0.88
SHROOM3-204ENST00000473602 TMEM144Q7Z5S9 345 aa9.53□□□□□ -0.88
SHROOM3-204ENST00000473602 C12orf45Q8N5I9 185 aaPredicted RBP9.53□□□□□ -0.88
SHROOM3-204ENST00000473602 SEC22CQ9BRL7 303 aa9.53□□□□□ -0.88
SHROOM3-204ENST00000473602 RCL1Q9Y2P8 373 aaKnown RBP9.53□□□□□ -0.88
SHROOM3-204ENST00000473602 PMS2P5A8MQ11 134 aa9.52□□□□□ -0.89
SHROOM3-204ENST00000473602 MBPP02686 304 aaPredicted RBP9.52□□□□□ -0.89
SHROOM3-204ENST00000473602 IL5P05113 134 aa9.52□□□□□ -0.89
SHROOM3-204ENST00000473602 ZNF688P0C7X2 276 aa9.52□□□□□ -0.89
SHROOM3-204ENST00000473602 SNRPD3P62318 126 aaKnown RBP9.52□□□□□ -0.89
SHROOM3-204ENST00000473602 OR2F1Q13607 317 aa9.52□□□□□ -0.89
SHROOM3-204ENST00000473602 TMEM41BQ5BJD5 291 aa9.52□□□□□ -0.89
SHROOM3-204ENST00000473602 LEMD1Q68G75 181 aa9.52□□□□□ -0.89
SHROOM3-204ENST00000473602 STHQ8IWL8 128 aa9.52□□□□□ -0.89
SHROOM3-204ENST00000473602 BPIFCQ8NFQ6 507 aa9.52□□□□□ -0.89
SHROOM3-204ENST00000473602 OR10P1Q8NGE3 313 aa9.52□□□□□ -0.89
SHROOM3-204ENST00000473602 ENKURQ8TC29 256 aa9.52□□□□□ -0.89
SHROOM3-204ENST00000473602 GATAD1Q8WUU5 269 aa9.52□□□□□ -0.89
SHROOM3-204ENST00000473602 C5orf51A6NDU8 294 aa9.51□□□□□ -0.89
SHROOM3-204ENST00000473602 CCSO14618 274 aa9.51□□□□□ -0.89
SHROOM3-204ENST00000473602 METTL15P1P0C7V9 234 aa9.51□□□□□ -0.89
SHROOM3-204ENST00000473602 ATF4P18848 351 aaPredicted RBP9.51□□□□□ -0.89
SHROOM3-204ENST00000473602 SELENOTP62341 195 aa9.51□□□□□ -0.89
SHROOM3-204ENST00000473602 SAMD13Q5VXD3 122 aa9.51□□□□□ -0.89
SHROOM3-204ENST00000473602 MORN3Q6PF18 240 aaPredicted RBP9.51□□□□□ -0.89
SHROOM3-204ENST00000473602 TRPT1Q86TN4 253 aaKnown RBP9.51□□□□□ -0.89
SHROOM3-204ENST00000473602 C2orf50Q96LR7 162 aa9.51□□□□□ -0.89
SHROOM3-204ENST00000473602 HECTD4Q9Y4D8 3996 aa9.5□□□□□ -0.89
SHROOM3-204ENST00000473602 SMCO3A2RU48 225 aa9.5□□□□□ -0.89
SHROOM3-204ENST00000473602 C7orf66A4D0T2 115 aa9.5□□□□□ -0.89
SHROOM3-204ENST00000473602 FAM25EA8MYX2 175 aa9.5□□□□□ -0.89
SHROOM3-204ENST00000473602 L7N2F9 121 aa9.5□□□□□ -0.89
SHROOM3-204ENST00000473602 SPP1P10451 314 aa9.5□□□□□ -0.89
SHROOM3-204ENST00000473602 VAMP2P63027 116 aa9.5□□□□□ -0.89
SHROOM3-204ENST00000473602 GSG1LQ6UXU4 331 aa9.5□□□□□ -0.89
SHROOM3-204ENST00000473602 GGACTQ9BVM4 153 aa9.5□□□□□ -0.89
SHROOM3-204ENST00000473602 GPN1Q9HCN4 374 aaPredicted RBP9.5□□□□□ -0.89
SHROOM3-204ENST00000473602 NPVFQ9HCQ7 196 aa9.5□□□□□ -0.89
SHROOM3-204ENST00000473602 MGAT4CQ9UBM8 478 aa9.5□□□□□ -0.89
SHROOM3-204ENST00000473602 AGRNO00468 2067 aa9.49□□□□□ -0.89
SHROOM3-204ENST00000473602 K7EPK0 472 aa9.49□□□□□ -0.89
SHROOM3-204ENST00000473602 PRAF2O60831 178 aa9.49□□□□□ -0.89
SHROOM3-204ENST00000473602 CA1P00915 261 aaPredicted RBP9.49□□□□□ -0.89
SHROOM3-204ENST00000473602 PVALBP20472 110 aaPredicted RBP9.49□□□□□ -0.89
SHROOM3-204ENST00000473602 PSMG4Q5JS54 123 aa9.49□□□□□ -0.89
SHROOM3-204ENST00000473602 CYP2G1PQ6ZSU1 146 aa9.49□□□□□ -0.89
SHROOM3-204ENST00000473602 OR8I2Q8N0Y5 310 aa9.49□□□□□ -0.89
SHROOM3-204ENST00000473602 TMEM217Q8N7C4 229 aa9.49□□□□□ -0.89
SHROOM3-204ENST00000473602 GPR82Q96P67 336 aa9.49□□□□□ -0.89
SHROOM3-204ENST00000473602 TMEM147Q9BVK8 224 aa9.49□□□□□ -0.89
SHROOM3-204ENST00000473602 LSM5Q9Y4Y9 91 aaKnown RBP9.49□□□□□ -0.89
SHROOM3-204ENST00000473602 A0A0J9YWU9 116 aa9.48□□□□□ -0.89
SHROOM3-204ENST00000473602 CCNKO75909 580 aa9.48□□□□□ -0.89
SHROOM3-204ENST00000473602 ORM2P19652 201 aa9.48□□□□□ -0.89
SHROOM3-204ENST00000473602 ID1P41134 155 aa9.48□□□□□ -0.89
SHROOM3-204ENST00000473602 GALR1P47211 349 aa9.48□□□□□ -0.89
SHROOM3-204ENST00000473602 PSMB3P49720 205 aa9.48□□□□□ -0.89
SHROOM3-204ENST00000473602 MEOX2P50222 304 aa9.48□□□□□ -0.89
SHROOM3-204ENST00000473602 DEFA1P59665 94 aa9.48□□□□□ -0.89
SHROOM3-204ENST00000473602 DEFA3P59666 94 aa9.48□□□□□ -0.89
SHROOM3-204ENST00000473602 PLP1P60201 277 aa9.48□□□□□ -0.89
SHROOM3-204ENST00000473602 IFITM3Q01628 133 aa9.48□□□□□ -0.89
SHROOM3-204ENST00000473602 TEPPQ6URK8 271 aa9.48□□□□□ -0.89
SHROOM3-204ENST00000473602 S100A7AQ86SG5 101 aa9.48□□□□□ -0.89
SHROOM3-204ENST00000473602 KIAA1109Q2LD37 5005 aa9.47□□□□□ -0.89
SHROOM3-204ENST00000473602 CXorf65A6NEN9 183 aa9.47□□□□□ -0.89
SHROOM3-204ENST00000473602 ZNF98A6NK75 572 aa9.47□□□□□ -0.89
SHROOM3-204ENST00000473602 KNCNA6PVL3 124 aa9.47□□□□□ -0.89
SHROOM3-204ENST00000473602 ISLRO14498 428 aa9.47□□□□□ -0.89
SHROOM3-204ENST00000473602 DEDDO75618 318 aa9.47□□□□□ -0.89
SHROOM3-204ENST00000473602 LINC00869P0C866 280 aa9.47□□□□□ -0.89
SHROOM3-204ENST00000473602 GATA2P23769 480 aaPredicted RBP9.47□□□□□ -0.89
SHROOM3-204ENST00000473602 RAP2BP61225 183 aa9.47□□□□□ -0.89
SHROOM3-204ENST00000473602 NUTF2P61970 127 aaKnown RBP9.47□□□□□ -0.89
SHROOM3-204ENST00000473602 RRAS2P62070 204 aaPredicted RBP9.47□□□□□ -0.89
SHROOM3-204ENST00000473602 IL15RAQ13261 267 aa9.47□□□□□ -0.89
SHROOM3-204ENST00000473602 PMS2P11Q13670 270 aa9.47□□□□□ -0.89
SHROOM3-204ENST00000473602 ACTL10Q5JWF8 245 aa9.47□□□□□ -0.89
SHROOM3-204ENST00000473602 PXDC1Q5TGL8 231 aa9.47□□□□□ -0.89
SHROOM3-204ENST00000473602 TMEM182Q6ZP80 229 aaPredicted RBP9.47□□□□□ -0.89
SHROOM3-204ENST00000473602 ZNF546Q86UE3 836 aa9.47□□□□□ -0.89
SHROOM3-204ENST00000473602 OR1B1Q8NGR6 318 aa9.47□□□□□ -0.89
SHROOM3-204ENST00000473602 RARRES2Q99969 163 aa9.47□□□□□ -0.89
SHROOM3-204ENST00000473602 C11orf1Q9H5F2 150 aa9.47□□□□□ -0.89
SHROOM3-204ENST00000473602 RNF24Q9Y225 148 aa9.47□□□□□ -0.89
SHROOM3-204ENST00000473602 VPS13DQ5THJ4 4388 aa9.47□□□□□ -0.89
SHROOM3-204ENST00000473602 H3BRN7 92 aa9.46□□□□□ -0.9
SHROOM3-204ENST00000473602 SOCS3O14543 225 aa9.46□□□□□ -0.9
SHROOM3-204ENST00000473602 BCAP31P51572 246 aa9.46□□□□□ -0.9
SHROOM3-204ENST00000473602 CAV2P51636 162 aa9.46□□□□□ -0.9
SHROOM3-204ENST00000473602 NRARPQ7Z6K4 114 aa9.46□□□□□ -0.9
SHROOM3-204ENST00000473602 RPP25LQ8N5L8 163 aaKnown RBP9.46□□□□□ -0.9
SHROOM3-204ENST00000473602 OR11H2Q8NH07 326 aa9.46□□□□□ -0.9
SHROOM3-204ENST00000473602 MARVELD1Q9BSK0 173 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms