RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 PMS2P11Q13670 270 aa4.97□□□□□ -1.61
HDAC1-205ENST00000472928 ECSCRQ19T08 205 aa4.97□□□□□ -1.61
HDAC1-205ENST00000472928 C16orf82Q7Z2V1 217 aa4.97□□□□□ -1.61
HDAC1-205ENST00000472928 NDUFA11Q86Y39 141 aa4.97□□□□□ -1.61
HDAC1-205ENST00000472928 ZNF114Q8NC26 417 aa4.97□□□□□ -1.61
HDAC1-205ENST00000472928 SAT2Q96F10 170 aaPredicted RBP4.97□□□□□ -1.61
HDAC1-205ENST00000472928 P2RX4Q99571 388 aa4.97□□□□□ -1.61
HDAC1-205ENST00000472928 CITED2Q99967 270 aaPredicted RBP4.97□□□□□ -1.61
HDAC1-205ENST00000472928 SRSF8Q9BRL6 282 aaKnown RBP4.97□□□□□ -1.61
HDAC1-205ENST00000472928 GINS3Q9BRX5 216 aa4.97□□□□□ -1.61
HDAC1-205ENST00000472928 ARV1Q9H2C2 271 aa4.97□□□□□ -1.61
HDAC1-205ENST00000472928 SERTAD4Q9NUC0 356 aa4.97□□□□□ -1.61
HDAC1-205ENST00000472928 SLC45A2Q9UMX9 530 aa4.97□□□□□ -1.61
HDAC1-205ENST00000472928 FBXO7Q9Y3I1 522 aa4.97□□□□□ -1.61
HDAC1-205ENST00000472928 F11RQ9Y624 299 aaKnown RBP4.97□□□□□ -1.61
HDAC1-205ENST00000472928 M0QZK8 103 aa4.96□□□□□ -1.62
HDAC1-205ENST00000472928 RAB5AP20339 215 aa4.96□□□□□ -1.62
HDAC1-205ENST00000472928 ATP6V0CP27449 155 aa4.96□□□□□ -1.62
HDAC1-205ENST00000472928 S100A2P29034 98 aa4.96□□□□□ -1.62
HDAC1-205ENST00000472928 DDTP30046 118 aa4.96□□□□□ -1.62
HDAC1-205ENST00000472928 OPRK1P41145 380 aa4.96□□□□□ -1.62
HDAC1-205ENST00000472928 PPT1P50897 306 aa4.96□□□□□ -1.62
HDAC1-205ENST00000472928 MFAP2P55001 183 aa4.96□□□□□ -1.62
HDAC1-205ENST00000472928 ATP5IP56385 69 aaPredicted RBP4.96□□□□□ -1.62
HDAC1-205ENST00000472928 NUTF2P61970 127 aaKnown RBP4.96□□□□□ -1.62
HDAC1-205ENST00000472928 EGFEM1PQ0D2K5 195 aa4.96□□□□□ -1.62
HDAC1-205ENST00000472928 ATP6V1FQ16864 119 aa4.96□□□□□ -1.62
HDAC1-205ENST00000472928 VWC2Q2TAL6 325 aa4.96□□□□□ -1.62
HDAC1-205ENST00000472928 EIF5AL1Q6IS14 154 aaKnown RBP4.96□□□□□ -1.62
HDAC1-205ENST00000472928 ZNF562Q6V9R5 426 aa4.96□□□□□ -1.62
HDAC1-205ENST00000472928 TMEM182Q6ZP80 229 aaPredicted RBP4.96□□□□□ -1.62
HDAC1-205ENST00000472928 OR1P1Q8NH06 330 aa4.96□□□□□ -1.62
HDAC1-205ENST00000472928 OR2T6Q8NHC8 308 aa4.96□□□□□ -1.62
HDAC1-205ENST00000472928 SCGB1C1Q8TD33 95 aa4.96□□□□□ -1.62
HDAC1-205ENST00000472928 RNASEH2CQ8TDP1 164 aaKnown RBP4.96□□□□□ -1.62
HDAC1-205ENST00000472928 GNPNAT1Q96EK6 184 aaPredicted RBP4.96□□□□□ -1.62
HDAC1-205ENST00000472928 SLC35E1Q96K37 410 aa4.96□□□□□ -1.62
HDAC1-205ENST00000472928 RSG1Q9BU20 258 aa4.96□□□□□ -1.62
HDAC1-205ENST00000472928 PARD6GQ9BYG4 376 aaPredicted RBP4.96□□□□□ -1.62
HDAC1-205ENST00000472928 WDR61Q9GZS3 305 aaKnown RBP4.96□□□□□ -1.62
HDAC1-205ENST00000472928 ZNF702PQ9H963 129 aa4.96□□□□□ -1.62
HDAC1-205ENST00000472928 TREM1Q9NP99 234 aa4.96□□□□□ -1.62
HDAC1-205ENST00000472928 U3KQK5 164 aa4.96□□□□□ -1.62
HDAC1-205ENST00000472928 CSMD3Q7Z407 3707 aa4.96□□□□□ -1.62
HDAC1-205ENST00000472928 IGHV3-21A0A0B4J1V1 117 aa4.95□□□□□ -1.62
HDAC1-205ENST00000472928 LCE6AA0A183 80 aa4.95□□□□□ -1.62
HDAC1-205ENST00000472928 ZNF785A8K8V0 405 aa4.95□□□□□ -1.62
HDAC1-205ENST00000472928 NPIPB5A8MRT5 1133 aa4.95□□□□□ -1.62
HDAC1-205ENST00000472928 SEC14L6B5MCN3 397 aa4.95□□□□□ -1.62
HDAC1-205ENST00000472928 FNDC10F2Z333 226 aa4.95□□□□□ -1.62
HDAC1-205ENST00000472928 TSTD3H0UI37 97 aa4.95□□□□□ -1.62
HDAC1-205ENST00000472928 CORTO00230 105 aa4.95□□□□□ -1.62
HDAC1-205ENST00000472928 CD5P06127 495 aa4.95□□□□□ -1.62
HDAC1-205ENST00000472928 DEFA4P12838 97 aa4.95□□□□□ -1.62
HDAC1-205ENST00000472928 PCP4P48539 62 aa4.95□□□□□ -1.62
HDAC1-205ENST00000472928 ELLP55199 621 aaPredicted RBP4.95□□□□□ -1.62
HDAC1-205ENST00000472928 PYY3Q5JQD4 70 aa4.95□□□□□ -1.62
HDAC1-205ENST00000472928 AKR1C8PQ5T2L2 129 aa4.95□□□□□ -1.62
HDAC1-205ENST00000472928 CASC10Q5T4H9 136 aa4.95□□□□□ -1.62
HDAC1-205ENST00000472928 ASPHD1Q5U4P2 390 aa4.95□□□□□ -1.62
HDAC1-205ENST00000472928 UNQ5815/PRO19632Q6UWF5 114 aa4.95□□□□□ -1.62
HDAC1-205ENST00000472928 BTNL8Q6UX41 500 aa4.95□□□□□ -1.62
HDAC1-205ENST00000472928 Q8N2B8 174 aa4.95□□□□□ -1.62
HDAC1-205ENST00000472928 LFNGQ8NES3 379 aa4.95□□□□□ -1.62
HDAC1-205ENST00000472928 OR2G3Q8NGZ4 309 aa4.95□□□□□ -1.62
HDAC1-205ENST00000472928 ACY3Q96HD9 319 aa4.95□□□□□ -1.62
HDAC1-205ENST00000472928 NOL4LQ96MY1 436 aaPredicted RBP4.95□□□□□ -1.62
HDAC1-205ENST00000472928 NPCDR1Q9BY65 106 aa4.95□□□□□ -1.62
HDAC1-205ENST00000472928 GPR61Q9BZJ8 451 aa4.95□□□□□ -1.62
HDAC1-205ENST00000472928 KCNIP2Q9NS61 270 aa4.95□□□□□ -1.62
HDAC1-205ENST00000472928 WDR83OSQ9Y284 106 aa4.95□□□□□ -1.62
HDAC1-205ENST00000472928 RFNGQ9Y644 331 aa4.95□□□□□ -1.62
HDAC1-205ENST00000472928 A0A087WWL8 130 aa4.94□□□□□ -1.62
HDAC1-205ENST00000472928 ZNF705EA8MWA4 302 aaPredicted RBP4.94□□□□□ -1.62
HDAC1-205ENST00000472928 C17orf112F2Z3M2 114 aa4.94□□□□□ -1.62
HDAC1-205ENST00000472928 CYB5BO43169 146 aa4.94□□□□□ -1.62
HDAC1-205ENST00000472928 MPDU1O75352 247 aa4.94□□□□□ -1.62
HDAC1-205ENST00000472928 MT-CO2P00403 227 aa4.94□□□□□ -1.62
HDAC1-205ENST00000472928 IGHV3-48P01763 117 aa4.94□□□□□ -1.62
HDAC1-205ENST00000472928 PRH1P02810 166 aa4.94□□□□□ -1.62
HDAC1-205ENST00000472928 SEC11BP0C7V7 166 aa4.94□□□□□ -1.62
HDAC1-205ENST00000472928 NHLRC4P0CG21 123 aaPredicted RBP4.94□□□□□ -1.62
HDAC1-205ENST00000472928 EGR2P11161 476 aaPredicted RBP4.94□□□□□ -1.62
HDAC1-205ENST00000472928 HOXD3P31249 432 aaPredicted RBP4.94□□□□□ -1.62
HDAC1-205ENST00000472928 SULT1A2P50226 295 aa4.94□□□□□ -1.62
HDAC1-205ENST00000472928 RND2P52198 227 aa4.94□□□□□ -1.62
HDAC1-205ENST00000472928 CRIP2P52943 208 aaPredicted RBP4.94□□□□□ -1.62
HDAC1-205ENST00000472928 GAGE1Q13065 139 aa4.94□□□□□ -1.62
HDAC1-205ENST00000472928 COTL1Q14019 142 aa4.94□□□□□ -1.62
HDAC1-205ENST00000472928 TMEM95Q3KNT9 176 aa4.94□□□□□ -1.62
HDAC1-205ENST00000472928 FFAR4Q5NUL3 377 aa4.94□□□□□ -1.62
HDAC1-205ENST00000472928 ETFRF1Q6IPR1 90 aa4.94□□□□□ -1.62
HDAC1-205ENST00000472928 SLC35E3Q7Z769 313 aa4.94□□□□□ -1.62
HDAC1-205ENST00000472928 COMMD1Q8N668 190 aa4.94□□□□□ -1.62
HDAC1-205ENST00000472928 ZNF709Q8N972 641 aa4.94□□□□□ -1.62
HDAC1-205ENST00000472928 FAM213BQ8TBF2 198 aa4.94□□□□□ -1.62
HDAC1-205ENST00000472928 MGST2Q99735 147 aa4.94□□□□□ -1.62
HDAC1-205ENST00000472928 PSMG3Q9BT73 122 aaPredicted RBP4.94□□□□□ -1.62
HDAC1-205ENST00000472928 GGTLC1Q9BX51 225 aa4.94□□□□□ -1.62
HDAC1-205ENST00000472928 NPFFR1Q9GZQ6 430 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms