RNA–Protein interactions for RNA: ENST00000472627.1

SMURF1-203, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene SMURF1, Length 825 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-203ENST00000472627 CROCCP3Q8IVE0 287 aa9.64□□□□□ -0.87
SMURF1-203ENST00000472627 LINC01587Q99440 93 aa9.64□□□□□ -0.87
SMURF1-203ENST00000472627 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.64□□□□□ -0.87
SMURF1-203ENST00000472627 MDFICQ9P1T7 246 aa9.64□□□□□ -0.87
SMURF1-203ENST00000472627 ZFP92A6NM28 416 aa9.63□□□□□ -0.87
SMURF1-203ENST00000472627 A8MTW9 85 aa9.63□□□□□ -0.87
SMURF1-203ENST00000472627 H3BNG1 76 aa9.63□□□□□ -0.87
SMURF1-203ENST00000472627 M0R2Z0 102 aa9.63□□□□□ -0.87
SMURF1-203ENST00000472627 S100A7P31151 101 aa9.63□□□□□ -0.87
SMURF1-203ENST00000472627 CNN1P51911 297 aaKnown RBP9.63□□□□□ -0.87
SMURF1-203ENST00000472627 TAS2R60P59551 318 aa9.63□□□□□ -0.87
SMURF1-203ENST00000472627 KLF9Q13886 244 aaPredicted RBP9.63□□□□□ -0.87
SMURF1-203ENST00000472627 AMTNQ6UX39 209 aa9.63□□□□□ -0.87
SMURF1-203ENST00000472627 ZNF493Q6ZR52 646 aa9.63□□□□□ -0.87
SMURF1-203ENST00000472627 TMEM144Q7Z5S9 345 aa9.63□□□□□ -0.87
SMURF1-203ENST00000472627 LYSMD2Q8IV50 215 aa9.63□□□□□ -0.87
SMURF1-203ENST00000472627 CCDC71LQ8N9Z2 235 aa9.63□□□□□ -0.87
SMURF1-203ENST00000472627 TP53RKQ96S44 253 aa9.63□□□□□ -0.87
SMURF1-203ENST00000472627 PPP1R14DQ9NXH3 145 aa9.63□□□□□ -0.87
SMURF1-203ENST00000472627 COPZ2Q9P299 210 aa9.63□□□□□ -0.87
SMURF1-203ENST00000472627 VPS13BQ7Z7G8 4022 aa9.62□□□□□ -0.87
SMURF1-203ENST00000472627 SNRPGP15A8MWD9 76 aa9.62□□□□□ -0.87
SMURF1-203ENST00000472627 GABARAPH6UMI1 98 aa9.62□□□□□ -0.87
SMURF1-203ENST00000472627 GABARAPO95166 117 aa9.62□□□□□ -0.87
SMURF1-203ENST00000472627 CLEC2LP0C7M8 214 aa9.62□□□□□ -0.87
SMURF1-203ENST00000472627 HTN1P15515 57 aa9.62□□□□□ -0.87
SMURF1-203ENST00000472627 GABARAPL2P60520 117 aa9.62□□□□□ -0.87
SMURF1-203ENST00000472627 LYZP61626 148 aa9.62□□□□□ -0.87
SMURF1-203ENST00000472627 ESRGQ1W209 222 aa9.62□□□□□ -0.87
SMURF1-203ENST00000472627 OR11H7Q8NGC8 314 aa9.62□□□□□ -0.87
SMURF1-203ENST00000472627 A0A0J9YY99 117 aa9.61□□□□□ -0.87
SMURF1-203ENST00000472627 LOC100506127A0A0U1RQW1 187 aa9.61□□□□□ -0.87
SMURF1-203ENST00000472627 PLAC8L1A1L4L8 177 aa9.61□□□□□ -0.87
SMURF1-203ENST00000472627 BOLA2-SMG1P6H3BVE0 249 aa9.61□□□□□ -0.87
SMURF1-203ENST00000472627 PRM2P04554 102 aa9.61□□□□□ -0.87
SMURF1-203ENST00000472627 AZU1P20160 251 aa9.61□□□□□ -0.87
SMURF1-203ENST00000472627 GCSHP23434 173 aa9.61□□□□□ -0.87
SMURF1-203ENST00000472627 GAMTQ14353 236 aa9.61□□□□□ -0.87
SMURF1-203ENST00000472627 AARDQ4LEZ3 155 aa9.61□□□□□ -0.87
SMURF1-203ENST00000472627 Q6ZRN7 208 aaPredicted RBP9.61□□□□□ -0.87
SMURF1-203ENST00000472627 BAP18Q8IXM2 172 aa9.61□□□□□ -0.87
SMURF1-203ENST00000472627 NOP10Q9NPE3 64 aaKnown RBP9.61□□□□□ -0.87
SMURF1-203ENST00000472627 SMIM31A0A1B0GVY4 71 aa9.6□□□□□ -0.87
SMURF1-203ENST00000472627 SIVA1O15304 175 aa9.6□□□□□ -0.87
SMURF1-203ENST00000472627 CRXO43186 299 aaPredicted RBP9.6□□□□□ -0.87
SMURF1-203ENST00000472627 KRTAP10-1P60331 282 aa9.6□□□□□ -0.87
SMURF1-203ENST00000472627 SAMD12Q8N8I0 201 aa9.6□□□□□ -0.87
SMURF1-203ENST00000472627 TMEM263Q8WUH6 116 aaKnown RBP9.6□□□□□ -0.87
SMURF1-203ENST00000472627 SLC35E1Q96K37 410 aa9.6□□□□□ -0.87
SMURF1-203ENST00000472627 CNBD2Q96M20 576 aa9.6□□□□□ -0.87
SMURF1-203ENST00000472627 VCX3BQ9H321 246 aa9.6□□□□□ -0.87
SMURF1-203ENST00000472627 ZNF701M0R085 212 aaPredicted RBP9.59□□□□□ -0.87
SMURF1-203ENST00000472627 CFDP00746 253 aaPredicted RBP9.59□□□□□ -0.87
SMURF1-203ENST00000472627 RLN2P04090 185 aa9.59□□□□□ -0.87
SMURF1-203ENST00000472627 PI3P19957 117 aa9.59□□□□□ -0.87
SMURF1-203ENST00000472627 UCP1P25874 307 aa9.59□□□□□ -0.87
SMURF1-203ENST00000472627 FUSP35637 526 aaKnown RBP eCLIP9.59□□□□□ -0.87
SMURF1-203ENST00000472627 RHOBP62745 196 aa9.59□□□□□ -0.87
SMURF1-203ENST00000472627 CCDC28AQ8IWP9 274 aa9.59□□□□□ -0.87
SMURF1-203ENST00000472627 ARRDC1Q8N5I2 433 aa9.59□□□□□ -0.87
SMURF1-203ENST00000472627 ZFAND1Q8TCF1 268 aa9.59□□□□□ -0.87
SMURF1-203ENST00000472627 GPX8Q8TED1 209 aa9.59□□□□□ -0.87
SMURF1-203ENST00000472627 C20orf173Q96LM9 149 aa9.59□□□□□ -0.87
SMURF1-203ENST00000472627 GPR82Q96P67 336 aa9.59□□□□□ -0.87
SMURF1-203ENST00000472627 U3KQ87 197 aa9.59□□□□□ -0.87
SMURF1-203ENST00000472627 TRAV12-2A0A075B6T6 113 aa9.58□□□□□ -0.88
SMURF1-203ENST00000472627 TRAV9-2A0A087WT02 112 aa9.58□□□□□ -0.88
SMURF1-203ENST00000472627 ZNF98A6NK75 572 aa9.58□□□□□ -0.88
SMURF1-203ENST00000472627 NXPH3O95157 252 aa9.58□□□□□ -0.88
SMURF1-203ENST00000472627 SP6Q3SY56 376 aa9.58□□□□□ -0.88
SMURF1-203ENST00000472627 NMSQ5H8A3 153 aa9.58□□□□□ -0.88
SMURF1-203ENST00000472627 OR1B1Q8NGR6 318 aa9.58□□□□□ -0.88
SMURF1-203ENST00000472627 RSG1Q9BU20 258 aa9.58□□□□□ -0.88
SMURF1-203ENST00000472627 SLC25A22Q9H936 323 aa9.58□□□□□ -0.88
SMURF1-203ENST00000472627 CACNG5Q9UF02 275 aa9.58□□□□□ -0.88
SMURF1-203ENST00000472627 A0A087WTM6 91 aa9.57□□□□□ -0.88
SMURF1-203ENST00000472627 A0A0G2JRQ6 117 aa9.57□□□□□ -0.88
SMURF1-203ENST00000472627 KRTAP29-1A8MX34 341 aaPredicted RBP9.57□□□□□ -0.88
SMURF1-203ENST00000472627 TNFAIP8O95379 198 aa9.57□□□□□ -0.88
SMURF1-203ENST00000472627 PLA2G1BP04054 148 aaKnown RBP9.57□□□□□ -0.88
SMURF1-203ENST00000472627 ATP5IP56385 69 aaPredicted RBP9.57□□□□□ -0.88
SMURF1-203ENST00000472627 ZNF90Q03938 601 aa9.57□□□□□ -0.88
SMURF1-203ENST00000472627 RNASE10Q5GAN6 216 aaKnown RBP9.57□□□□□ -0.88
SMURF1-203ENST00000472627 ZNF738Q8NE65 137 aa9.57□□□□□ -0.88
SMURF1-203ENST00000472627 OR4D5Q8NGN0 318 aa9.57□□□□□ -0.88
SMURF1-203ENST00000472627 RNASE8Q8TDE3 154 aaKnown RBP9.57□□□□□ -0.88
SMURF1-203ENST00000472627 RBPMSQ93062 196 aaKnown RBP9.57□□□□□ -0.88
SMURF1-203ENST00000472627 TMEM70Q9BUB7 260 aa9.57□□□□□ -0.88
SMURF1-203ENST00000472627 SLC45A2Q9UMX9 530 aa9.57□□□□□ -0.88
SMURF1-203ENST00000472627 SNURFLB1AK76 121 aa9.56□□□□□ -0.88
SMURF1-203ENST00000472627 H7BYZ3 331 aa9.56□□□□□ -0.88
SMURF1-203ENST00000472627 GPX4P36969 197 aaPredicted RBP9.56□□□□□ -0.88
SMURF1-203ENST00000472627 LGI3Q8N145 548 aa9.56□□□□□ -0.88
SMURF1-203ENST00000472627 TMEM170AQ8WVE7 144 aa9.56□□□□□ -0.88
SMURF1-203ENST00000472627 SLC25A39Q9BZJ4 359 aaPredicted RBP9.56□□□□□ -0.88
SMURF1-203ENST00000472627 GAGE12BA1L429 117 aa9.55□□□□□ -0.88
SMURF1-203ENST00000472627 GAGE7O76087 117 aa9.55□□□□□ -0.88
SMURF1-203ENST00000472627 CDS2O95674 445 aa9.55□□□□□ -0.88
SMURF1-203ENST00000472627 GAGE12FP0CL80 117 aa9.55□□□□□ -0.88
SMURF1-203ENST00000472627 GAGE12GP0CL81 117 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms