RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 ZNF767PQ75MW2 155 aa16.23■□□□□ 0.19
C9orf3-213ENST00000471978 OR8I2Q8N0Y5 310 aa16.23■□□□□ 0.19
C9orf3-213ENST00000471978 THAP8Q8NA92 274 aa16.23■□□□□ 0.19
C9orf3-213ENST00000471978 COQ8AQ8NI60 647 aa16.23■□□□□ 0.19
C9orf3-213ENST00000471978 SAV1Q9H4B6 383 aaPredicted RBP16.23■□□□□ 0.19
C9orf3-213ENST00000471978 IGHV4-4A0A075B6R2 117 aa16.22■□□□□ 0.19
C9orf3-213ENST00000471978 WRBO00258 174 aa16.22■□□□□ 0.19
C9orf3-213ENST00000471978 SOCS3O14543 225 aa16.22■□□□□ 0.19
C9orf3-213ENST00000471978 FXYD7P58549 80 aa16.22■□□□□ 0.19
C9orf3-213ENST00000471978 GSG1LQ6UXU4 331 aa16.22■□□□□ 0.19
C9orf3-213ENST00000471978 FOXI2Q6ZQN5 318 aa16.22■□□□□ 0.19
C9orf3-213ENST00000471978 CCDC190Q86UF4 302 aa16.22■□□□□ 0.19
C9orf3-213ENST00000471978 GGNBP1Q5YKI7 109 aa16.21■□□□□ 0.19
C9orf3-213ENST00000471978 HECTD4Q9Y4D8 3996 aa16.21■□□□□ 0.19
C9orf3-213ENST00000471978 DEFB131BA0A096LNP1 70 aa16.2■□□□□ 0.18
C9orf3-213ENST00000471978 PRSS46E5RG02 174 aa16.2■□□□□ 0.18
C9orf3-213ENST00000471978 CFDP00746 253 aaPredicted RBP16.2■□□□□ 0.18
C9orf3-213ENST00000471978 ZNF705AQ6ZN79 300 aaPredicted RBP16.2■□□□□ 0.18
C9orf3-213ENST00000471978 OR4B1Q8NGF8 309 aa16.2■□□□□ 0.18
C9orf3-213ENST00000471978 NEU1Q99519 415 aa16.2■□□□□ 0.18
C9orf3-213ENST00000471978 RNF126Q9BV68 326 aa16.2■□□□□ 0.18
C9orf3-213ENST00000471978 ISLRO14498 428 aa16.19■□□□□ 0.18
C9orf3-213ENST00000471978 SPANXN5Q5MJ07 72 aa16.19■□□□□ 0.18
C9orf3-213ENST00000471978 IGHV3OR16-12A0A075B7B8 117 aa16.18■□□□□ 0.18
C9orf3-213ENST00000471978 ZNF705FA8MVS1 300 aaPredicted RBP16.18■□□□□ 0.18
C9orf3-213ENST00000471978 ZNF705DP0CH99 300 aaPredicted RBP16.18■□□□□ 0.18
C9orf3-213ENST00000471978 ZNF705BP0CI00 300 aaPredicted RBP16.18■□□□□ 0.18
C9orf3-213ENST00000471978 SPANXN2Q5MJ10 180 aa16.18■□□□□ 0.18
C9orf3-213ENST00000471978 SAMD13Q5VXD3 122 aa16.18■□□□□ 0.18
C9orf3-213ENST00000471978 SPATA31B1PQ5VZV4 182 aa16.18■□□□□ 0.18
C9orf3-213ENST00000471978 ZNF709Q8N972 641 aa16.18■□□□□ 0.18
C9orf3-213ENST00000471978 CLUHP3Q96NS8 147 aa16.18■□□□□ 0.18
C9orf3-213ENST00000471978 SLC25A22Q9H936 323 aa16.18■□□□□ 0.18
C9orf3-213ENST00000471978 SMIM9A6NGZ8 99 aa16.17■□□□□ 0.18
C9orf3-213ENST00000471978 F6UB75 175 aa16.17■□□□□ 0.18
C9orf3-213ENST00000471978 H3BP45 60 aa16.17■□□□□ 0.18
C9orf3-213ENST00000471978 GALR1P47211 349 aa16.17■□□□□ 0.18
C9orf3-213ENST00000471978 EMP1P54849 157 aa16.17■□□□□ 0.18
C9orf3-213ENST00000471978 UBE2MP61081 183 aaKnown RBP16.17■□□□□ 0.18
C9orf3-213ENST00000471978 EBLN2Q6P2I7 272 aa16.17■□□□□ 0.18
C9orf3-213ENST00000471978 BPIFCQ8NFQ6 507 aa16.17■□□□□ 0.18
C9orf3-213ENST00000471978 C16orf92Q96LL3 132 aa16.17■□□□□ 0.18
C9orf3-213ENST00000471978 SRRQ9GZT4 340 aa16.17■□□□□ 0.18
C9orf3-213ENST00000471978 SLC35B3Q9H1N7 401 aa16.17■□□□□ 0.18
C9orf3-213ENST00000471978 SLC25A32Q9H2D1 315 aa16.17■□□□□ 0.18
C9orf3-213ENST00000471978 SLC45A2Q9UMX9 530 aa16.17■□□□□ 0.18
C9orf3-213ENST00000471978 STRAPQ9Y3F4 350 aaKnown RBP16.17■□□□□ 0.18
C9orf3-213ENST00000471978 TMEM189A5PLL7 270 aa16.16■□□□□ 0.18
C9orf3-213ENST00000471978 ZNF98A6NK75 572 aa16.16■□□□□ 0.18
C9orf3-213ENST00000471978 AMBPP02760 352 aa16.16■□□□□ 0.18
C9orf3-213ENST00000471978 ORM2P19652 201 aa16.16■□□□□ 0.18
C9orf3-213ENST00000471978 GATA2P23769 480 aaPredicted RBP16.16■□□□□ 0.18
C9orf3-213ENST00000471978 MEOX2P50222 304 aa16.16■□□□□ 0.18
C9orf3-213ENST00000471978 PAX9P55771 341 aa16.16■□□□□ 0.18
C9orf3-213ENST00000471978 PSG9Q00887 426 aa16.16■□□□□ 0.18
C9orf3-213ENST00000471978 AKR1C1Q04828 323 aa16.16■□□□□ 0.18
C9orf3-213ENST00000471978 FAM78BQ5VT40 261 aa16.16■□□□□ 0.18
C9orf3-213ENST00000471978 RSG1Q9BU20 258 aa16.16■□□□□ 0.18
C9orf3-213ENST00000471978 RBM38Q9H0Z9 239 aaKnown RBP16.16■□□□□ 0.18
C9orf3-213ENST00000471978 RPRMQ9NS64 109 aa16.16■□□□□ 0.18
C9orf3-213ENST00000471978 C9orf170A2RU37 121 aa16.15■□□□□ 0.18
C9orf3-213ENST00000471978 ADAP1O75689 374 aa16.15■□□□□ 0.18
C9orf3-213ENST00000471978 SPART-AS1P0CW21 52 aa16.15■□□□□ 0.18
C9orf3-213ENST00000471978 INPP1P49441 399 aa16.15■□□□□ 0.18
C9orf3-213ENST00000471978 TMEM182Q6ZP80 229 aaPredicted RBP16.15■□□□□ 0.18
C9orf3-213ENST00000471978 ACOT7LQ6ZUV0 252 aa16.15■□□□□ 0.18
C9orf3-213ENST00000471978 C20orf173Q96LM9 149 aa16.15■□□□□ 0.18
C9orf3-213ENST00000471978 RFNGQ9Y644 331 aa16.15■□□□□ 0.18
C9orf3-213ENST00000471978 A0A0J9YX75 114 aa16.14■□□□□ 0.17
C9orf3-213ENST00000471978 ID3Q02535 119 aa16.14■□□□□ 0.17
C9orf3-213ENST00000471978 OR1B1Q8NGR6 318 aa16.14■□□□□ 0.17
C9orf3-213ENST00000471978 TMEM147Q9BVK8 224 aa16.14■□□□□ 0.17
C9orf3-213ENST00000471978 SCRT1Q9BWW7 348 aa16.14■□□□□ 0.17
C9orf3-213ENST00000471978 NAP1L6A6NFF2 107 aa16.13■□□□□ 0.17
C9orf3-213ENST00000471978 NDUFB6O95139 128 aa16.13■□□□□ 0.17
C9orf3-213ENST00000471978 S100A7P31151 101 aa16.13■□□□□ 0.17
C9orf3-213ENST00000471978 POLR2GP62487 172 aaKnown RBP eCLIP16.13■□□□□ 0.17
C9orf3-213ENST00000471978 BAK1Q16611 211 aa16.13■□□□□ 0.17
C9orf3-213ENST00000471978 TRIQKQ629K1 86 aa16.13■□□□□ 0.17
C9orf3-213ENST00000471978 OR4D5Q8NGN0 318 aa16.13■□□□□ 0.17
C9orf3-213ENST00000471978 C17orf77Q96MU5 243 aa16.13■□□□□ 0.17
C9orf3-213ENST00000471978 NDUFAF3Q9BU61 184 aa16.13■□□□□ 0.17
C9orf3-213ENST00000471978 FLVCR2Q9UPI3 526 aa16.13■□□□□ 0.17
C9orf3-213ENST00000471978 GOLT1BQ9Y3E0 138 aa16.13■□□□□ 0.17
C9orf3-213ENST00000471978 SMCO3A2RU48 225 aa16.12■□□□□ 0.17
C9orf3-213ENST00000471978 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.12■□□□□ 0.17
C9orf3-213ENST00000471978 TMEM144Q7Z5S9 345 aa16.12■□□□□ 0.17
C9orf3-213ENST00000471978 GPR82Q96P67 336 aa16.12■□□□□ 0.17
C9orf3-213ENST00000471978 C7orf50Q9BRJ6 194 aaKnown RBP16.12■□□□□ 0.17
C9orf3-213ENST00000471978 PSENENQ9NZ42 101 aa16.12■□□□□ 0.17
C9orf3-213ENST00000471978 DOK5Q9P104 306 aa16.12■□□□□ 0.17
C9orf3-213ENST00000471978 ZNF701M0R085 212 aaPredicted RBP16.11■□□□□ 0.17
C9orf3-213ENST00000471978 IFNA21P01568 189 aa16.11■□□□□ 0.17
C9orf3-213ENST00000471978 DNAH2Q9P225 4427 aa16.11■□□□□ 0.17
C9orf3-213ENST00000471978 LINC00854A0A1B0GVQ3 168 aa16.1■□□□□ 0.17
C9orf3-213ENST00000471978 SSSCA1O60232 199 aa16.1■□□□□ 0.17
C9orf3-213ENST00000471978 OR4E1P0C645 316 aa16.1■□□□□ 0.17
C9orf3-213ENST00000471978 P0DMU3 169 aa16.1■□□□□ 0.17
C9orf3-213ENST00000471978 FAM231AP0DMU4 169 aa16.1■□□□□ 0.17
C9orf3-213ENST00000471978 FAM231CP0DMU5 169 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms