RNA–Protein interactions for RNA: ENST00000471880.5

SSR4-208, Transcript of signal sequence receptor subunit 4, human

TSL 5

Gene SSR4, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSR4-208	ENST00000471880	UPK1B	O75841	260 aa		10.9	□□□□□ -0.66
SSR4-208	ENST00000471880	MBP	P02686	304 aa	Predicted RBP	10.9	□□□□□ -0.66
SSR4-208	ENST00000471880	IL5	P05113	134 aa		10.9	□□□□□ -0.66
SSR4-208	ENST00000471880	ASAH1	Q13510	395 aa		10.9	□□□□□ -0.66
SSR4-208	ENST00000471880	GSG1L	Q6UXU4	331 aa		10.9	□□□□□ -0.66
SSR4-208	ENST00000471880	OR10P1	Q8NGE3	313 aa		10.9	□□□□□ -0.66
SSR4-208	ENST00000471880	RNF183	Q96D59	192 aa		10.9	□□□□□ -0.66
SSR4-208	ENST00000471880	LINC00052	Q96N35	136 aa		10.9	□□□□□ -0.66
SSR4-208	ENST00000471880	TMEM147	Q9BVK8	224 aa		10.9	□□□□□ -0.66
SSR4-208	ENST00000471880	FBXL17	Q9UF56	701 aa		10.9	□□□□□ -0.66
SSR4-208	ENST00000471880	CXorf65	A6NEN9	183 aa		10.89	□□□□□ -0.67
SSR4-208	ENST00000471880	PRSS46	E5RG02	174 aa		10.89	□□□□□ -0.67
SSR4-208	ENST00000471880	CFD	P00746	253 aa	Predicted RBP	10.89	□□□□□ -0.67
SSR4-208	ENST00000471880	CAV2	P51636	162 aa		10.89	□□□□□ -0.67
SSR4-208	ENST00000471880	RARRES2	Q99969	163 aa		10.89	□□□□□ -0.67
SSR4-208	ENST00000471880	GPN1	Q9HCN4	374 aa	Predicted RBP	10.89	□□□□□ -0.67
SSR4-208	ENST00000471880	TSC22D2	O75157	780 aa		10.88	□□□□□ -0.67
SSR4-208	ENST00000471880	OR5G3	P0C626	314 aa		10.88	□□□□□ -0.67
SSR4-208	ENST00000471880	PVALB	P20472	110 aa	Predicted RBP	10.88	□□□□□ -0.67
SSR4-208	ENST00000471880	ID1	P41134	155 aa		10.88	□□□□□ -0.67
SSR4-208	ENST00000471880	PAX9	P55771	341 aa		10.88	□□□□□ -0.67
SSR4-208	ENST00000471880	RAP2B	P61225	183 aa		10.88	□□□□□ -0.67
SSR4-208	ENST00000471880	CYP2G1P	Q6ZSU1	146 aa		10.88	□□□□□ -0.67
SSR4-208	ENST00000471880	TMEM144	Q7Z5S9	345 aa		10.88	□□□□□ -0.67
SSR4-208	ENST00000471880	OR11H2	Q8NH07	326 aa		10.88	□□□□□ -0.67
SSR4-208	ENST00000471880	BATF3	Q9NR55	127 aa		10.88	□□□□□ -0.67
SSR4-208	ENST00000471880	C7orf66	A4D0T2	115 aa		10.87	□□□□□ -0.67
SSR4-208	ENST00000471880		K7EPK0	472 aa		10.87	□□□□□ -0.67
SSR4-208	ENST00000471880	IGKV3-20	P01619	116 aa		10.87	□□□□□ -0.67
SSR4-208	ENST00000471880	S100A7	P31151	101 aa		10.87	□□□□□ -0.67
SSR4-208	ENST00000471880	GALR1	P47211	349 aa		10.87	□□□□□ -0.67
SSR4-208	ENST00000471880	TAS2R30	P59541	319 aa		10.87	□□□□□ -0.67
SSR4-208	ENST00000471880	DLK1	P80370	383 aa		10.87	□□□□□ -0.67
SSR4-208	ENST00000471880	FGL1	Q08830	312 aa		10.87	□□□□□ -0.67
SSR4-208	ENST00000471880	TMEM14EP	Q6UXP3	125 aa		10.87	□□□□□ -0.67
SSR4-208	ENST00000471880	TMEM182	Q6ZP80	229 aa	Predicted RBP	10.87	□□□□□ -0.67
SSR4-208	ENST00000471880	C2orf50	Q96LR7	162 aa		10.87	□□□□□ -0.67
SSR4-208	ENST00000471880	NPVF	Q9HCQ7	196 aa		10.87	□□□□□ -0.67
SSR4-208	ENST00000471880	SACS	Q9NZJ4	4579 aa		10.87	□□□□□ -0.67
SSR4-208	ENST00000471880	LINC00869	P0C866	280 aa		10.86	□□□□□ -0.67
SSR4-208	ENST00000471880	DEFA1	P59665	94 aa		10.86	□□□□□ -0.67
SSR4-208	ENST00000471880	DEFA3	P59666	94 aa		10.86	□□□□□ -0.67
SSR4-208	ENST00000471880	SLC38A11	Q08AI6	406 aa		10.86	□□□□□ -0.67
SSR4-208	ENST00000471880	C1orf194	Q5T5A4	169 aa		10.86	□□□□□ -0.67
SSR4-208	ENST00000471880	TRPT1	Q86TN4	253 aa	Known RBP	10.86	□□□□□ -0.67
SSR4-208	ENST00000471880	TMEM217	Q8N7C4	229 aa		10.86	□□□□□ -0.67
SSR4-208	ENST00000471880	GATAD1	Q8WUU5	269 aa		10.86	□□□□□ -0.67
SSR4-208	ENST00000471880	HIGD1A	Q9Y241	93 aa		10.86	□□□□□ -0.67
SSR4-208	ENST00000471880	RYR2	Q92736	4967 aa		10.85	□□□□□ -0.67
SSR4-208	ENST00000471880	ZNF98	A6NK75	572 aa		10.85	□□□□□ -0.67
SSR4-208	ENST00000471880	PMS2P5	A8MQ11	134 aa		10.85	□□□□□ -0.67
SSR4-208	ENST00000471880	GOSR2	O14653	212 aa		10.85	□□□□□ -0.67
SSR4-208	ENST00000471880	DEFB4A	O15263	64 aa		10.85	□□□□□ -0.67
SSR4-208	ENST00000471880	CST7	O76096	145 aa		10.85	□□□□□ -0.67
SSR4-208	ENST00000471880	SPP1	P10451	314 aa		10.85	□□□□□ -0.67
SSR4-208	ENST00000471880	MORN3	Q6PF18	240 aa	Predicted RBP	10.85	□□□□□ -0.67
SSR4-208	ENST00000471880	TEPP	Q6URK8	271 aa		10.85	□□□□□ -0.67
SSR4-208	ENST00000471880	NRARP	Q7Z6K4	114 aa		10.85	□□□□□ -0.67
SSR4-208	ENST00000471880	C16orf92	Q96LL3	132 aa		10.85	□□□□□ -0.67
SSR4-208	ENST00000471880	RSG1	Q9BU20	258 aa		10.85	□□□□□ -0.67
SSR4-208	ENST00000471880	SCRT1	Q9BWW7	348 aa		10.85	□□□□□ -0.67
SSR4-208	ENST00000471880	ARL6	Q9H0F7	186 aa		10.85	□□□□□ -0.67
SSR4-208	ENST00000471880	SLC25A32	Q9H2D1	315 aa		10.85	□□□□□ -0.67
SSR4-208	ENST00000471880	CLEC5A	Q9NY25	188 aa		10.85	□□□□□ -0.67
SSR4-208	ENST00000471880	FAM24A	A6NFZ4	105 aa		10.84	□□□□□ -0.67
SSR4-208	ENST00000471880	INMT-MINDY4	F8WBC2	141 aa		10.84	□□□□□ -0.67
SSR4-208	ENST00000471880	HYPM	O75409	117 aa		10.84	□□□□□ -0.67
SSR4-208	ENST00000471880	SIX6	O95475	246 aa		10.84	□□□□□ -0.67
SSR4-208	ENST00000471880	ATF4	P18848	351 aa	Predicted RBP	10.84	□□□□□ -0.67
SSR4-208	ENST00000471880	DEFB1	P60022	68 aa		10.84	□□□□□ -0.67
SSR4-208	ENST00000471880	SELENOT	P62341	195 aa		10.84	□□□□□ -0.67
SSR4-208	ENST00000471880	IFITM3	Q01628	133 aa		10.84	□□□□□ -0.67
SSR4-208	ENST00000471880	EWSR1	Q01844	656 aa	Known RBP eCLIP	10.84	□□□□□ -0.67
SSR4-208	ENST00000471880	ARL16	Q0P5N6	197 aa		10.84	□□□□□ -0.67
SSR4-208	ENST00000471880	RAB32	Q13637	225 aa		10.84	□□□□□ -0.67
SSR4-208	ENST00000471880	C4BPB	P20851	252 aa		10.83	□□□□□ -0.68
SSR4-208	ENST00000471880	PSMB3	P49720	205 aa		10.83	□□□□□ -0.68
SSR4-208	ENST00000471880	FXYD7	P58549	80 aa		10.83	□□□□□ -0.68
SSR4-208	ENST00000471880	NUTF2	P61970	127 aa	Known RBP	10.83	□□□□□ -0.68
SSR4-208	ENST00000471880	LRRC37A5P	Q49AS3	106 aa		10.83	□□□□□ -0.68
SSR4-208	ENST00000471880	OR4B1	Q8NGF8	309 aa		10.83	□□□□□ -0.68
SSR4-208	ENST00000471880	UHRF2	Q96PU4	802 aa		10.83	□□□□□ -0.68
SSR4-208	ENST00000471880	SLC45A2	Q9UMX9	530 aa		10.83	□□□□□ -0.68
SSR4-208	ENST00000471880	SSNA1	O43805	119 aa		10.82	□□□□□ -0.68
SSR4-208	ENST00000471880	MEOX2	P50222	304 aa		10.82	□□□□□ -0.68
SSR4-208	ENST00000471880	RAB31	Q13636	194 aa		10.82	□□□□□ -0.68
SSR4-208	ENST00000471880	TMEM41B	Q5BJD5	291 aa		10.82	□□□□□ -0.68
SSR4-208	ENST00000471880	EBLN2	Q6P2I7	272 aa		10.82	□□□□□ -0.68
SSR4-208	ENST00000471880	S100A7A	Q86SG5	101 aa		10.82	□□□□□ -0.68
SSR4-208	ENST00000471880	ZNF546	Q86UE3	836 aa		10.82	□□□□□ -0.68
SSR4-208	ENST00000471880	STX12	Q86Y82	276 aa		10.82	□□□□□ -0.68
SSR4-208	ENST00000471880	LRRC20	Q8TCA0	184 aa		10.82	□□□□□ -0.68
SSR4-208	ENST00000471880	GPR82	Q96P67	336 aa		10.82	□□□□□ -0.68
SSR4-208	ENST00000471880	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	10.82	□□□□□ -0.68
SSR4-208	ENST00000471880	XCL2	Q9UBD3	114 aa		10.82	□□□□□ -0.68
SSR4-208	ENST00000471880	UBE2L5P	A0A1B0GUS4	154 aa		10.81	□□□□□ -0.68
SSR4-208	ENST00000471880	FNDC10	F2Z333	226 aa		10.81	□□□□□ -0.68
SSR4-208	ENST00000471880		H3BRN7	92 aa		10.81	□□□□□ -0.68
SSR4-208	ENST00000471880	ISLR	O14498	428 aa		10.81	□□□□□ -0.68
SSR4-208	ENST00000471880	AGPAT2	O15120	278 aa		10.81	□□□□□ -0.68

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