RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 ADAP1O75689 374 aa5.76□□□□□ -1.49
USP48-207ENST00000471752 SNRPCP09234 159 aaKnown RBP5.76□□□□□ -1.49
USP48-207ENST00000471752 SPP1P10451 314 aa5.76□□□□□ -1.49
USP48-207ENST00000471752 HLA-DRB4P13762 266 aa5.76□□□□□ -1.49
USP48-207ENST00000471752 MIFP14174 115 aa5.76□□□□□ -1.49
USP48-207ENST00000471752 GPX4P36969 197 aaPredicted RBP5.76□□□□□ -1.49
USP48-207ENST00000471752 EIF2B2P49770 351 aaKnown RBP5.76□□□□□ -1.49
USP48-207ENST00000471752 BAK1Q16611 211 aa5.76□□□□□ -1.49
USP48-207ENST00000471752 FAM78BQ5VT40 261 aa5.76□□□□□ -1.49
USP48-207ENST00000471752 GGNBP1Q5YKI7 109 aa5.76□□□□□ -1.49
USP48-207ENST00000471752 MORN3Q6PF18 240 aaPredicted RBP5.76□□□□□ -1.49
USP48-207ENST00000471752 ZNF705AQ6ZN79 300 aaPredicted RBP5.76□□□□□ -1.49
USP48-207ENST00000471752 SDHCQ99643 169 aaPredicted RBP5.76□□□□□ -1.49
USP48-207ENST00000471752 HRH4Q9H3N8 390 aa5.76□□□□□ -1.49
USP48-207ENST00000471752 RSL24D1Q9UHA3 163 aaKnown RBP5.76□□□□□ -1.49
USP48-207ENST00000471752 SCP2D1Q9UJQ7 156 aa5.76□□□□□ -1.49
USP48-207ENST00000471752 HLA-DRB4X5D2U9 266 aa5.76□□□□□ -1.49
USP48-207ENST00000471752 DEFB131BA0A096LNP1 70 aa5.75□□□□□ -1.49
USP48-207ENST00000471752 TRAV10A0A0B4J240 114 aa5.75□□□□□ -1.49
USP48-207ENST00000471752 LINC00854A0A1B0GVQ3 168 aa5.75□□□□□ -1.49
USP48-207ENST00000471752 A0A1B0GVY2 172 aa5.75□□□□□ -1.49
USP48-207ENST00000471752 ZNF705FA8MVS1 300 aaPredicted RBP5.75□□□□□ -1.49
USP48-207ENST00000471752 RTL8CO15255 209 aa5.75□□□□□ -1.49
USP48-207ENST00000471752 SFT2D2O95562 160 aa5.75□□□□□ -1.49
USP48-207ENST00000471752 VAMP1P23763 118 aa5.75□□□□□ -1.49
USP48-207ENST00000471752 NKX2-1P43699 371 aaPredicted RBP5.75□□□□□ -1.49
USP48-207ENST00000471752 PAX9P55771 341 aa5.75□□□□□ -1.49
USP48-207ENST00000471752 UBE2MP61081 183 aaKnown RBP5.75□□□□□ -1.49
USP48-207ENST00000471752 ETFRF1Q6IPR1 90 aa5.75□□□□□ -1.49
USP48-207ENST00000471752 AMTNQ6UX39 209 aa5.75□□□□□ -1.49
USP48-207ENST00000471752 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.75□□□□□ -1.49
USP48-207ENST00000471752 CCDC190Q86UF4 302 aa5.75□□□□□ -1.49
USP48-207ENST00000471752 RNF182Q8N6D2 247 aa5.75□□□□□ -1.49
USP48-207ENST00000471752 THAP8Q8NA92 274 aa5.75□□□□□ -1.49
USP48-207ENST00000471752 OR4B1Q8NGF8 309 aa5.75□□□□□ -1.49
USP48-207ENST00000471752 NARS2Q96I59 477 aaKnown RBP5.75□□□□□ -1.49
USP48-207ENST00000471752 RSG1Q9BU20 258 aa5.75□□□□□ -1.49
USP48-207ENST00000471752 SLC25A32Q9H2D1 315 aa5.75□□□□□ -1.49
USP48-207ENST00000471752 SAV1Q9H4B6 383 aaPredicted RBP5.75□□□□□ -1.49
USP48-207ENST00000471752 A0A0J9YX75 114 aa5.74□□□□□ -1.49
USP48-207ENST00000471752 PMS2P5A8MQ11 134 aa5.74□□□□□ -1.49
USP48-207ENST00000471752 ORM2P19652 201 aa5.74□□□□□ -1.49
USP48-207ENST00000471752 AP2S1P53680 142 aaPredicted RBP5.74□□□□□ -1.49
USP48-207ENST00000471752 SNRPD3P62318 126 aaKnown RBP5.74□□□□□ -1.49
USP48-207ENST00000471752 POLR2GP62487 172 aaKnown RBP eCLIP5.74□□□□□ -1.49
USP48-207ENST00000471752 ARL16Q0P5N6 197 aa5.74□□□□□ -1.49
USP48-207ENST00000471752 FCN2Q15485 313 aa5.74□□□□□ -1.49
USP48-207ENST00000471752 TMEM128Q5BJH2 165 aa5.74□□□□□ -1.49
USP48-207ENST00000471752 PATE2Q6UY27 113 aa5.74□□□□□ -1.49
USP48-207ENST00000471752 TOMM5Q8N4H5 51 aa5.74□□□□□ -1.49
USP48-207ENST00000471752 LRTM2Q8N967 370 aa5.74□□□□□ -1.49
USP48-207ENST00000471752 SLC35E1Q96K37 410 aa5.74□□□□□ -1.49
USP48-207ENST00000471752 TRGV9Q99603 122 aa5.74□□□□□ -1.49
USP48-207ENST00000471752 RBM38Q9H0Z9 239 aaKnown RBP5.74□□□□□ -1.49
USP48-207ENST00000471752 SLC25A22Q9H936 323 aa5.74□□□□□ -1.49
USP48-207ENST00000471752 DOK5Q9P104 306 aa5.74□□□□□ -1.49
USP48-207ENST00000471752 RABL2BQ9UNT1 228 aa5.74□□□□□ -1.49
USP48-207ENST00000471752 IGLV2-18A0A075B6J9 118 aa5.73□□□□□ -1.49
USP48-207ENST00000471752 ZNF98A6NK75 572 aa5.73□□□□□ -1.49
USP48-207ENST00000471752 ZNF705GA8MUZ8 300 aaPredicted RBP5.73□□□□□ -1.49
USP48-207ENST00000471752 SNRPGP15A8MWD9 76 aa5.73□□□□□ -1.49
USP48-207ENST00000471752 C11orf94C9JXX5 98 aa5.73□□□□□ -1.49
USP48-207ENST00000471752 CRXO43186 299 aaPredicted RBP5.73□□□□□ -1.49
USP48-207ENST00000471752 SYNGR2O43760 224 aa5.73□□□□□ -1.49
USP48-207ENST00000471752 AZU1P20160 251 aa5.73□□□□□ -1.49
USP48-207ENST00000471752 BTCP35070 178 aa5.73□□□□□ -1.49
USP48-207ENST00000471752 KIR3DS1Q14943 382 aa5.73□□□□□ -1.49
USP48-207ENST00000471752 SPANXN5Q5MJ07 72 aa5.73□□□□□ -1.49
USP48-207ENST00000471752 FAM222AQ5U5X8 452 aa5.73□□□□□ -1.49
USP48-207ENST00000471752 FOXI2Q6ZQN5 318 aa5.73□□□□□ -1.49
USP48-207ENST00000471752 OR8I2Q8N0Y5 310 aa5.73□□□□□ -1.49
USP48-207ENST00000471752 SCGB3A2Q96PL1 93 aa5.73□□□□□ -1.49
USP48-207ENST00000471752 BCL7BQ9BQE9 202 aa5.73□□□□□ -1.49
USP48-207ENST00000471752 RNF126Q9BV68 326 aa5.73□□□□□ -1.49
USP48-207ENST00000471752 SRRQ9GZT4 340 aa5.73□□□□□ -1.49
USP48-207ENST00000471752 SEPSECSQ9HD40 501 aaKnown RBP5.73□□□□□ -1.49
USP48-207ENST00000471752 DKK2Q9UBU2 259 aa5.73□□□□□ -1.49
USP48-207ENST00000471752 TRAV12-2A0A075B6T6 113 aa5.72□□□□□ -1.49
USP48-207ENST00000471752 C9orf170A2RU37 121 aa5.72□□□□□ -1.49
USP48-207ENST00000471752 H3BTX0 84 aa5.72□□□□□ -1.49
USP48-207ENST00000471752 M0R2Z0 102 aa5.72□□□□□ -1.49
USP48-207ENST00000471752 HTN3P15516 51 aa5.72□□□□□ -1.49
USP48-207ENST00000471752 ANXA7P20073 488 aaKnown RBP5.72□□□□□ -1.49
USP48-207ENST00000471752 RRAS2P62070 204 aaPredicted RBP5.72□□□□□ -1.49
USP48-207ENST00000471752 PSG9Q00887 426 aa5.72□□□□□ -1.49
USP48-207ENST00000471752 ID3Q02535 119 aa5.72□□□□□ -1.49
USP48-207ENST00000471752 OR8G2PQ6IF36 304 aa5.72□□□□□ -1.49
USP48-207ENST00000471752 ACOT7LQ6ZUV0 252 aa5.72□□□□□ -1.49
USP48-207ENST00000471752 NOXA1Q86UR1 476 aa5.72□□□□□ -1.49
USP48-207ENST00000471752 POM121L12Q8N7R1 296 aa5.72□□□□□ -1.49
USP48-207ENST00000471752 OR1B1Q8NGR6 318 aa5.72□□□□□ -1.49
USP48-207ENST00000471752 PPP1R14BQ96C90 147 aa5.72□□□□□ -1.49
USP48-207ENST00000471752 UHRF2Q96PU4 802 aa5.72□□□□□ -1.49
USP48-207ENST00000471752 NEU1Q99519 415 aa5.72□□□□□ -1.49
USP48-207ENST00000471752 PARD6GQ9BYG4 376 aaPredicted RBP5.72□□□□□ -1.49
USP48-207ENST00000471752 KRTAP4-5Q9BYR2 181 aa5.72□□□□□ -1.49
USP48-207ENST00000471752 RABL2AQ9UBK7 228 aaPredicted RBP5.72□□□□□ -1.49
USP48-207ENST00000471752 FAT1Q14517 4588 aa5.72□□□□□ -1.49
USP48-207ENST00000471752 PLAC8L1A1L4L8 177 aa5.71□□□□□ -1.5
USP48-207ENST00000471752 CCDC160A6NGH7 325 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms