RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 DRC3Q9H069 523 aa-0.79□□□□□ -2.54
PRPF40A-207ENST00000471701 UCK1Q9HA47 277 aa-0.79□□□□□ -2.54
PRPF40A-207ENST00000471701 ZGRF1Q86YA3 2104 aa-0.79□□□□□ -2.54
PRPF40A-207ENST00000471701 TRAV26-2A0A0B4J265 109 aa-0.8□□□□□ -2.54
PRPF40A-207ENST00000471701 OR4C46A6NHA9 309 aa-0.8□□□□□ -2.54
PRPF40A-207ENST00000471701 OCM2P0CE71 109 aa-0.8□□□□□ -2.54
PRPF40A-207ENST00000471701 RNASE4P34096 147 aaKnown RBP-0.8□□□□□ -2.54
PRPF40A-207ENST00000471701 AP2S1P53680 142 aaPredicted RBP-0.8□□□□□ -2.54
PRPF40A-207ENST00000471701 SPCS3P61009 180 aa-0.8□□□□□ -2.54
PRPF40A-207ENST00000471701 Q6ZQY7 126 aa-0.8□□□□□ -2.54
PRPF40A-207ENST00000471701 FAM9CQ8IZT9 166 aa-0.8□□□□□ -2.54
PRPF40A-207ENST00000471701 CACNA1CQ13936 2221 aa-0.8□□□□□ -2.54
PRPF40A-207ENST00000471701 PIRO00625 290 aa-0.81□□□□□ -2.54
PRPF40A-207ENST00000471701 SLC16A4O15374 487 aa-0.81□□□□□ -2.54
PRPF40A-207ENST00000471701 LY6G6CO95867 125 aa-0.81□□□□□ -2.54
PRPF40A-207ENST00000471701 SERPINE1P05121 402 aa-0.81□□□□□ -2.54
PRPF40A-207ENST00000471701 FXYD4P59646 89 aa-0.81□□□□□ -2.54
PRPF40A-207ENST00000471701 PSME3P61289 254 aa-0.81□□□□□ -2.54
PRPF40A-207ENST00000471701 ASB16-AS1Q495Z4 193 aa-0.81□□□□□ -2.54
PRPF40A-207ENST00000471701 Q5BKY6 102 aa-0.81□□□□□ -2.54
PRPF40A-207ENST00000471701 KRT222Q8N1A0 295 aa-0.81□□□□□ -2.54
PRPF40A-207ENST00000471701 OR52E6Q96RD3 313 aa-0.81□□□□□ -2.54
PRPF40A-207ENST00000471701 CCL19Q99731 98 aa-0.81□□□□□ -2.54
PRPF40A-207ENST00000471701 GGACTQ9BVM4 153 aa-0.81□□□□□ -2.54
PRPF40A-207ENST00000471701 MRPL27Q9P0M9 148 aaKnown RBP-0.81□□□□□ -2.54
PRPF40A-207ENST00000471701 SCN8AQ9UQD0 1980 aa-0.81□□□□□ -2.54
PRPF40A-207ENST00000471701 C9orf84Q5VXU9 1444 aa-0.81□□□□□ -2.54
PRPF40A-207ENST00000471701 FAM236DA0A1B0GTK5 79 aa-0.82□□□□□ -2.54
PRPF40A-207ENST00000471701 E7EUB6 86 aa-0.82□□□□□ -2.54
PRPF40A-207ENST00000471701 ERC2-IT1O76042 136 aa-0.82□□□□□ -2.54
PRPF40A-207ENST00000471701 TNNC2P02585 160 aa-0.82□□□□□ -2.54
PRPF40A-207ENST00000471701 RBP1P09455 135 aa-0.82□□□□□ -2.54
PRPF40A-207ENST00000471701 FAM236CP0DP71 79 aa-0.82□□□□□ -2.54
PRPF40A-207ENST00000471701 CD79AP11912 226 aa-0.82□□□□□ -2.54
PRPF40A-207ENST00000471701 DSCR4P56555 118 aaPredicted RBP-0.82□□□□□ -2.54
PRPF40A-207ENST00000471701 OR52A1Q9UKL2 312 aa-0.82□□□□□ -2.54
PRPF40A-207ENST00000471701 OBSL1O75147 1896 aa-0.82□□□□□ -2.54
PRPF40A-207ENST00000471701 POLQO75417 2590 aa-0.83□□□□□ -2.54
PRPF40A-207ENST00000471701 CACNA1AO00555 2505 aa-0.83□□□□□ -2.54
PRPF40A-207ENST00000471701 MGAMO43451 1857 aa-0.83□□□□□ -2.54
PRPF40A-207ENST00000471701 DEXIO95424 95 aa-0.83□□□□□ -2.54
PRPF40A-207ENST00000471701 CXCL8P10145 99 aa-0.83□□□□□ -2.54
PRPF40A-207ENST00000471701 C8orf74Q6P047 294 aa-0.83□□□□□ -2.54
PRPF40A-207ENST00000471701 FAM151BQ6UXP7 276 aa-0.83□□□□□ -2.54
PRPF40A-207ENST00000471701 C12orf45Q8N5I9 185 aaPredicted RBP-0.83□□□□□ -2.54
PRPF40A-207ENST00000471701 CANT1Q8WVQ1 401 aa-0.83□□□□□ -2.54
PRPF40A-207ENST00000471701 FBXO5Q9UKT4 447 aa-0.83□□□□□ -2.54
PRPF40A-207ENST00000471701 A0A0A6YYH2 397 aa-0.84□□□□□ -2.54
PRPF40A-207ENST00000471701 A6NJ64 397 aa-0.84□□□□□ -2.54
PRPF40A-207ENST00000471701 CYB5BO43169 146 aa-0.84□□□□□ -2.54
PRPF40A-207ENST00000471701 TGOLN2O43493 480 aa-0.84□□□□□ -2.54
PRPF40A-207ENST00000471701 SPTBP11277 2137 aa-0.84□□□□□ -2.54
PRPF40A-207ENST00000471701 SRIP30626 198 aa-0.84□□□□□ -2.54
PRPF40A-207ENST00000471701 DEFA3P59666 94 aa-0.84□□□□□ -2.54
PRPF40A-207ENST00000471701 OR2F1Q13607 317 aa-0.84□□□□□ -2.54
PRPF40A-207ENST00000471701 ACOT6Q3I5F7 207 aaPredicted RBP-0.84□□□□□ -2.54
PRPF40A-207ENST00000471701 OR10K1Q8NGX5 313 aa-0.84□□□□□ -2.54
PRPF40A-207ENST00000471701 CCDC90BQ9GZT6 254 aa-0.84□□□□□ -2.54
PRPF40A-207ENST00000471701 TMEM133Q9H2Q1 129 aa-0.84□□□□□ -2.54
PRPF40A-207ENST00000471701 RNF11Q9Y3C5 154 aa-0.84□□□□□ -2.54
PRPF40A-207ENST00000471701 ERBINQ96RT1 1412 aa-0.84□□□□□ -2.54
PRPF40A-207ENST00000471701 RFX7Q2KHR2 1363 aa-0.84□□□□□ -2.54
PRPF40A-207ENST00000471701 TENM4Q6N022 2769 aa-0.85□□□□□ -2.54
PRPF40A-207ENST00000471701 SNAPC4Q5SXM2 1469 aa-0.85□□□□□ -2.55
PRPF40A-207ENST00000471701 CACNA1HO95180 2353 aa-0.85□□□□□ -2.55
PRPF40A-207ENST00000471701 CHP2O43745 196 aa-0.85□□□□□ -2.55
PRPF40A-207ENST00000471701 DCTN3O75935 186 aa-0.85□□□□□ -2.55
PRPF40A-207ENST00000471701 SMIM17P0DL12 118 aa-0.85□□□□□ -2.55
PRPF40A-207ENST00000471701 HIST3H3Q16695 136 aa-0.85□□□□□ -2.55
PRPF40A-207ENST00000471701 C1orf134Q5TEV5 83 aa-0.85□□□□□ -2.55
PRPF40A-207ENST00000471701 PDZD9Q8IXQ8 264 aa-0.85□□□□□ -2.55
PRPF40A-207ENST00000471701 PTH2Q96A98 100 aa-0.85□□□□□ -2.55
PRPF40A-207ENST00000471701 MIA2Q96PC5 1412 aa-0.85□□□□□ -2.55
PRPF40A-207ENST00000471701 LINC00467Q9BRT7 94 aa-0.85□□□□□ -2.55
PRPF40A-207ENST00000471701 WNK2Q9Y3S1 2297 aa-0.85□□□□□ -2.55
PRPF40A-207ENST00000471701 COL24A1Q17RW2 1714 aa-0.86□□□□□ -2.55
PRPF40A-207ENST00000471701 CALB1P05937 261 aa-0.86□□□□□ -2.55
PRPF40A-207ENST00000471701 OCIAD2Q56VL3 154 aa-0.86□□□□□ -2.55
PRPF40A-207ENST00000471701 STAG3L4Q8TBR4 150 aa-0.86□□□□□ -2.55
PRPF40A-207ENST00000471701 FAM172AQ8WUF8 416 aa-0.86□□□□□ -2.55
PRPF40A-207ENST00000471701 CCDC94Q9BW85 323 aaPredicted RBP-0.86□□□□□ -2.55
PRPF40A-207ENST00000471701 PBOV1Q9GZY1 135 aa-0.86□□□□□ -2.55
PRPF40A-207ENST00000471701 TMEM126AQ9H061 195 aa-0.86□□□□□ -2.55
PRPF40A-207ENST00000471701 OPTCQ9UBM4 332 aa-0.86□□□□□ -2.55
PRPF40A-207ENST00000471701 FREM3P0C091 2139 aa-0.86□□□□□ -2.55
PRPF40A-207ENST00000471701 HIST1H1EP10412 219 aaKnown RBP-0.87□□□□□ -2.55
PRPF40A-207ENST00000471701 OR5AS1Q8N127 324 aa-0.87□□□□□ -2.55
PRPF40A-207ENST00000471701 SLC25A40Q8TBP6 338 aa-0.87□□□□□ -2.55
PRPF40A-207ENST00000471701 ZNF431Q8TF32 576 aaPredicted RBP-0.87□□□□□ -2.55
PRPF40A-207ENST00000471701 C2orf50Q96LR7 162 aa-0.87□□□□□ -2.55
PRPF40A-207ENST00000471701 SLC25A21Q9BQT8 299 aaPredicted RBP-0.87□□□□□ -2.55
PRPF40A-207ENST00000471701 USE1Q9NZ43 259 aa-0.87□□□□□ -2.55
PRPF40A-207ENST00000471701 LY96Q9Y6Y9 160 aa-0.87□□□□□ -2.55
PRPF40A-207ENST00000471701 CELSR2Q9HCU4 2923 aa-0.87□□□□□ -2.55
PRPF40A-207ENST00000471701 A8MWV9 139 aa-0.88□□□□□ -2.55
PRPF40A-207ENST00000471701 NDUFB3O43676 98 aa-0.88□□□□□ -2.55
PRPF40A-207ENST00000471701 EIF5AP63241 154 aaKnown RBP-0.88□□□□□ -2.55
PRPF40A-207ENST00000471701 CDK6Q00534 326 aa-0.88□□□□□ -2.55
PRPF40A-207ENST00000471701 RAB37Q96AX2 223 aa-0.88□□□□□ -2.55
PRPF40A-207ENST00000471701 MUCL1Q96DR8 90 aa-0.88□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms