RNA–Protein interactions for RNA: ENST00000471414.1

COPS3-206, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-206ENST00000471414 GDF5OSQ5U4N7 250 aa0.6□□□□□ -2.31
COPS3-206ENST00000471414 TEX261Q6UWH6 196 aa0.6□□□□□ -2.31
COPS3-206ENST00000471414 SOSTDC1Q6X4U4 206 aa0.6□□□□□ -2.31
COPS3-206ENST00000471414 PDZD9Q8IXQ8 264 aa0.6□□□□□ -2.31
COPS3-206ENST00000471414 Q8IYB0 196 aa0.6□□□□□ -2.31
COPS3-206ENST00000471414 CLECL1Q8IZS7 167 aa0.6□□□□□ -2.31
COPS3-206ENST00000471414 PXT1Q8NFP0 134 aa0.6□□□□□ -2.31
COPS3-206ENST00000471414 U3KQ87 197 aa0.6□□□□□ -2.31
COPS3-206ENST00000471414 PLXNA4Q9HCM2 1894 aa0.6□□□□□ -2.31
COPS3-206ENST00000471414 FBN2P35556 2912 aa0.6□□□□□ -2.31
COPS3-206ENST00000471414 NOTCH1P46531 2555 aa0.59□□□□□ -2.31
COPS3-206ENST00000471414 ROS1P08922 2347 aa0.59□□□□□ -2.31
COPS3-206ENST00000471414 NUP210LQ5VU65 1888 aa0.59□□□□□ -2.31
COPS3-206ENST00000471414 MIA2Q96PC5 1412 aa0.59□□□□□ -2.31
COPS3-206ENST00000471414 A8MWV9 139 aa0.59□□□□□ -2.31
COPS3-206ENST00000471414 TAX1BP3O14907 124 aa0.59□□□□□ -2.31
COPS3-206ENST00000471414 NDUFB3O43676 98 aa0.59□□□□□ -2.31
COPS3-206ENST00000471414 GGCTO75223 188 aaKnown RBP0.59□□□□□ -2.31
COPS3-206ENST00000471414 UBE2BP63146 152 aa0.59□□□□□ -2.31
COPS3-206ENST00000471414 DHRS4L2Q6PKH6 230 aa0.59□□□□□ -2.31
COPS3-206ENST00000471414 TMEM254Q8TBM7 123 aa0.59□□□□□ -2.31
COPS3-206ENST00000471414 CEP19Q96LK0 163 aa0.59□□□□□ -2.31
COPS3-206ENST00000471414 GPER1Q99527 375 aa0.59□□□□□ -2.31
COPS3-206ENST00000471414 CDC42SE1Q9NRR8 79 aa0.59□□□□□ -2.31
COPS3-206ENST00000471414 PYCARDQ9ULZ3 195 aa0.59□□□□□ -2.31
COPS3-206ENST00000471414 NCOA6Q14686 2063 aaPredicted RBP0.59□□□□□ -2.32
COPS3-206ENST00000471414 KIAA1549Q9HCM3 1950 aa0.59□□□□□ -2.32
COPS3-206ENST00000471414 NUP98P52948 1817 aa0.59□□□□□ -2.32
COPS3-206ENST00000471414 PEAK1Q9H792 1746 aa0.58□□□□□ -2.32
COPS3-206ENST00000471414 DOCK4Q8N1I0 1966 aa0.58□□□□□ -2.32
COPS3-206ENST00000471414 M0R378 163 aa0.58□□□□□ -2.32
COPS3-206ENST00000471414 CST8O60676 142 aa0.58□□□□□ -2.32
COPS3-206ENST00000471414 NCALDP61601 193 aa0.58□□□□□ -2.32
COPS3-206ENST00000471414 MYL5Q02045 173 aa0.58□□□□□ -2.32
COPS3-206ENST00000471414 MPV17LQ2QL34 196 aa0.58□□□□□ -2.32
COPS3-206ENST00000471414 OR2T35Q8NGX2 323 aa0.58□□□□□ -2.32
COPS3-206ENST00000471414 OR10K1Q8NGX5 313 aa0.58□□□□□ -2.32
COPS3-206ENST00000471414 CANT1Q8WVQ1 401 aa0.58□□□□□ -2.32
COPS3-206ENST00000471414 PATE1Q8WXA2 126 aa0.58□□□□□ -2.32
COPS3-206ENST00000471414 SLC25A21Q9BQT8 299 aaPredicted RBP0.58□□□□□ -2.32
COPS3-206ENST00000471414 CHCHD2Q9Y6H1 151 aaPredicted RBP0.58□□□□□ -2.32
COPS3-206ENST00000471414 LAMB4A4D0S4 1761 aa0.57□□□□□ -2.32
COPS3-206ENST00000471414 KDM6AO15550 1401 aaPredicted RBP0.57□□□□□ -2.32
COPS3-206ENST00000471414 TNS3Q68CZ2 1445 aa0.57□□□□□ -2.32
COPS3-206ENST00000471414 TCRBV4S1A1TA0A5B7 111 aa0.57□□□□□ -2.32
COPS3-206ENST00000471414 TMEM256-PLSCR3K7ERE1 68 aa0.57□□□□□ -2.32
COPS3-206ENST00000471414 AIPO00170 330 aa0.57□□□□□ -2.32
COPS3-206ENST00000471414 CCL16O15467 120 aa0.57□□□□□ -2.32
COPS3-206ENST00000471414 BANF1O75531 89 aa0.57□□□□□ -2.32
COPS3-206ENST00000471414 ATG12O94817 140 aa0.57□□□□□ -2.32
COPS3-206ENST00000471414 NDUFC2O95298 119 aa0.57□□□□□ -2.32
COPS3-206ENST00000471414 ROMO1P60602 79 aa0.57□□□□□ -2.32
COPS3-206ENST00000471414 BASP1P80723 227 aaKnown RBP0.57□□□□□ -2.32
COPS3-206ENST00000471414 FAM74A1Q5RGS3 127 aa0.57□□□□□ -2.32
COPS3-206ENST00000471414 HACD4Q5VWC8 232 aa0.57□□□□□ -2.32
COPS3-206ENST00000471414 ST6GALNAC3Q8NDV1 305 aa0.57□□□□□ -2.32
COPS3-206ENST00000471414 TEX37Q96LM6 180 aa0.57□□□□□ -2.32
COPS3-206ENST00000471414 PSTPIP2Q9H939 334 aa0.57□□□□□ -2.32
COPS3-206ENST00000471414 PRNDQ9UKY0 176 aa0.57□□□□□ -2.32
COPS3-206ENST00000471414 LY96Q9Y6Y9 160 aa0.57□□□□□ -2.32
COPS3-206ENST00000471414 ALPK3Q96L96 1907 aa0.57□□□□□ -2.32
COPS3-206ENST00000471414 ARHGEF11O15085 1522 aa0.57□□□□□ -2.32
COPS3-206ENST00000471414 CASP8AP2Q9UKL3 1982 aa0.57□□□□□ -2.32
COPS3-206ENST00000471414 E9PCH4 1651 aa0.56□□□□□ -2.32
COPS3-206ENST00000471414 MYLKQ15746 1914 aa0.56□□□□□ -2.32
COPS3-206ENST00000471414 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.56□□□□□ -2.32
COPS3-206ENST00000471414 TRBV6-4A0A1B0GX49 114 aa0.56□□□□□ -2.32
COPS3-206ENST00000471414 DUXBA0A1W2PPF3 345 aa0.56□□□□□ -2.32
COPS3-206ENST00000471414 G3V2T6 193 aa0.56□□□□□ -2.32
COPS3-206ENST00000471414 CCL25O15444 150 aa0.56□□□□□ -2.32
COPS3-206ENST00000471414 HLA-EP13747 358 aa0.56□□□□□ -2.32
COPS3-206ENST00000471414 ZNF25P17030 456 aaPredicted RBP0.56□□□□□ -2.32
COPS3-206ENST00000471414 DYNLT3P51808 116 aa0.56□□□□□ -2.32
COPS3-206ENST00000471414 GNG5P63218 68 aa0.56□□□□□ -2.32
COPS3-206ENST00000471414 PRB3Q04118 309 aaPredicted RBP0.56□□□□□ -2.32
COPS3-206ENST00000471414 SCGB2B2Q4G0G5 96 aa0.56□□□□□ -2.32
COPS3-206ENST00000471414 EIF5AL1Q6IS14 154 aaKnown RBP0.56□□□□□ -2.32
COPS3-206ENST00000471414 C2orf82Q6UX34 121 aa0.56□□□□□ -2.32
COPS3-206ENST00000471414 C4orf22Q6V702 233 aa0.56□□□□□ -2.32
COPS3-206ENST00000471414 EXOC3-AS1Q8N2X6 119 aa0.56□□□□□ -2.32
COPS3-206ENST00000471414 BORCS5Q969J3 196 aa0.56□□□□□ -2.32
COPS3-206ENST00000471414 TP53RKQ96S44 253 aa0.56□□□□□ -2.32
COPS3-206ENST00000471414 NPCDR1Q9BY65 106 aa0.56□□□□□ -2.32
COPS3-206ENST00000471414 MED29Q9NX70 200 aa0.56□□□□□ -2.32
COPS3-206ENST00000471414 STOML2Q9UJZ1 356 aa0.56□□□□□ -2.32
COPS3-206ENST00000471414 PCTPQ9UKL6 214 aa0.56□□□□□ -2.32
COPS3-206ENST00000471414 LAMA4Q16363 1823 aa0.56□□□□□ -2.32
COPS3-206ENST00000471414 MYO5AQ9Y4I1 1855 aaKnown RBP0.56□□□□□ -2.32
COPS3-206ENST00000471414 EIF3AQ14152 1382 aaKnown RBP0.56□□□□□ -2.32
COPS3-206ENST00000471414 MYH2Q9UKX2 1941 aa0.56□□□□□ -2.32
COPS3-206ENST00000471414 SIP14410 1827 aa0.55□□□□□ -2.32
COPS3-206ENST00000471414 TRAV10A0A0B4J240 114 aa0.55□□□□□ -2.32
COPS3-206ENST00000471414 TLCD2A6NGC4 264 aa0.55□□□□□ -2.32
COPS3-206ENST00000471414 E7EUB6 86 aa0.55□□□□□ -2.32
COPS3-206ENST00000471414 C17orf112F2Z3M2 114 aa0.55□□□□□ -2.32
COPS3-206ENST00000471414 H7C1C5 153 aa0.55□□□□□ -2.32
COPS3-206ENST00000471414 NFYBP25208 207 aa0.55□□□□□ -2.32
COPS3-206ENST00000471414 PHBP35232 272 aa0.55□□□□□ -2.32
COPS3-206ENST00000471414 DSCR4P56555 118 aaPredicted RBP0.55□□□□□ -2.32
COPS3-206ENST00000471414 LCN6P62502 163 aa0.55□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms