RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 PCNPQ8WW12 178 aaKnown RBP7.54□□□□□ -1.2
CCM2-204ENST00000470837 UFC1Q9Y3C8 167 aa7.54□□□□□ -1.2
CCM2-204ENST00000470837 A0A1W2PRX2 142 aa7.53□□□□□ -1.2
CCM2-204ENST00000470837 A0A1W2PS18 150 aa7.53□□□□□ -1.2
CCM2-204ENST00000470837 LINC01619G3V211 115 aa7.53□□□□□ -1.2
CCM2-204ENST00000470837 HMGB3O15347 200 aaKnown RBP7.53□□□□□ -1.2
CCM2-204ENST00000470837 TRBV12-3P01733 135 aa7.53□□□□□ -1.2
CCM2-204ENST00000470837 PROK1P58294 105 aa7.53□□□□□ -1.2
CCM2-204ENST00000470837 KIAA0141Q14154 515 aaPredicted RBP7.53□□□□□ -1.2
CCM2-204ENST00000470837 PQLC2Q6ZP29 291 aa7.53□□□□□ -1.2
CCM2-204ENST00000470837 GPHB5Q86YW7 130 aa7.53□□□□□ -1.2
CCM2-204ENST00000470837 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.53□□□□□ -1.2
CCM2-204ENST00000470837 OR1N2Q8NGR9 330 aa7.53□□□□□ -1.2
CCM2-204ENST00000470837 MBD3L1Q8WWY6 194 aa7.53□□□□□ -1.2
CCM2-204ENST00000470837 TMEM37Q8WXS4 190 aa7.53□□□□□ -1.2
CCM2-204ENST00000470837 GRAMD2BQ96HH9 432 aa7.53□□□□□ -1.2
CCM2-204ENST00000470837 UHRF2Q96PU4 802 aa7.53□□□□□ -1.2
CCM2-204ENST00000470837 SLC25A39Q9BZJ4 359 aaPredicted RBP7.53□□□□□ -1.2
CCM2-204ENST00000470837 TMEM231Q9H6L2 316 aa7.53□□□□□ -1.2
CCM2-204ENST00000470837 SEPSECSQ9HD40 501 aaKnown RBP7.53□□□□□ -1.2
CCM2-204ENST00000470837 PLA2G2EQ9NZK7 142 aa7.53□□□□□ -1.2
CCM2-204ENST00000470837 MRPL27Q9P0M9 148 aaKnown RBP7.53□□□□□ -1.2
CCM2-204ENST00000470837 TRAV1-1A0A0B4J248 108 aa7.52□□□□□ -1.21
CCM2-204ENST00000470837 I3L521 148 aa7.52□□□□□ -1.21
CCM2-204ENST00000470837 M0QZ24 198 aa7.52□□□□□ -1.21
CCM2-204ENST00000470837 FGF8P55075 233 aaPredicted RBP7.52□□□□□ -1.21
CCM2-204ENST00000470837 USF2Q15853 346 aaPredicted RBP7.52□□□□□ -1.21
CCM2-204ENST00000470837 TCTEX1D4Q5JR98 221 aa7.52□□□□□ -1.21
CCM2-204ENST00000470837 IL34Q6ZMJ4 242 aa7.52□□□□□ -1.21
CCM2-204ENST00000470837 MIR17HGQ75NE6 70 aa7.52□□□□□ -1.21
CCM2-204ENST00000470837 BPIFA4PQ86YQ2 179 aa7.52□□□□□ -1.21
CCM2-204ENST00000470837 OR8I2Q8N0Y5 310 aa7.52□□□□□ -1.21
CCM2-204ENST00000470837 OR11H1Q8NG94 326 aa7.52□□□□□ -1.21
CCM2-204ENST00000470837 OR4F17Q8NGA8 305 aa7.52□□□□□ -1.21
CCM2-204ENST00000470837 OR4F4Q96R69 305 aa7.52□□□□□ -1.21
CCM2-204ENST00000470837 CITED2Q99967 270 aaPredicted RBP7.52□□□□□ -1.21
CCM2-204ENST00000470837 SHANK2-AS3Q9BTD1 123 aa7.52□□□□□ -1.21
CCM2-204ENST00000470837 DAZ1Q9NQZ3 744 aaKnown RBP7.52□□□□□ -1.21
CCM2-204ENST00000470837 TMEM167BQ9NRX6 74 aa7.52□□□□□ -1.21
CCM2-204ENST00000470837 MAST4O15021 2626 aa7.51□□□□□ -1.21
CCM2-204ENST00000470837 IGHV4OR15-8A0A075B7B6 117 aa7.51□□□□□ -1.21
CCM2-204ENST00000470837 IGHV3OR16-8A0A075B7F1 116 aa7.51□□□□□ -1.21
CCM2-204ENST00000470837 A0A087WW49 117 aa7.51□□□□□ -1.21
CCM2-204ENST00000470837 H3BRN7 92 aa7.51□□□□□ -1.21
CCM2-204ENST00000470837 STAG3L2P0CL84 134 aa7.51□□□□□ -1.21
CCM2-204ENST00000470837 STAG3L3P0CL85 134 aa7.51□□□□□ -1.21
CCM2-204ENST00000470837 ARL14EPLP0DKL9 152 aa7.51□□□□□ -1.21
CCM2-204ENST00000470837 RPL7P18124 248 aaKnown RBP7.51□□□□□ -1.21
CCM2-204ENST00000470837 HOXD3P31249 432 aaPredicted RBP7.51□□□□□ -1.21
CCM2-204ENST00000470837 TAGLN2P37802 199 aaKnown RBP7.51□□□□□ -1.21
CCM2-204ENST00000470837 PSMB3P49720 205 aa7.51□□□□□ -1.21
CCM2-204ENST00000470837 UBE2L3P68036 154 aaKnown RBP7.51□□□□□ -1.21
CCM2-204ENST00000470837 ZNF726P1Q15940 193 aa7.51□□□□□ -1.21
CCM2-204ENST00000470837 NSUN5P1Q3KNT7 163 aa7.51□□□□□ -1.21
CCM2-204ENST00000470837 SPATA31B1PQ5VZV4 182 aa7.51□□□□□ -1.21
CCM2-204ENST00000470837 PATE2Q6UY27 113 aa7.51□□□□□ -1.21
CCM2-204ENST00000470837 C8orf86Q6ZUL3 223 aa7.51□□□□□ -1.21
CCM2-204ENST00000470837 NDUFA11Q86Y39 141 aa7.51□□□□□ -1.21
CCM2-204ENST00000470837 C1QL4Q86Z23 238 aa7.51□□□□□ -1.21
CCM2-204ENST00000470837 WIPF2Q8TF74 440 aaPredicted RBP7.51□□□□□ -1.21
CCM2-204ENST00000470837 TMEM190Q8WZ59 177 aa7.51□□□□□ -1.21
CCM2-204ENST00000470837 MARC2Q969Z3 335 aa7.51□□□□□ -1.21
CCM2-204ENST00000470837 GPR82Q96P67 336 aa7.51□□□□□ -1.21
CCM2-204ENST00000470837 PAXXQ9BUH6 204 aa7.51□□□□□ -1.21
CCM2-204ENST00000470837 ELOVL1Q9BW60 279 aa7.51□□□□□ -1.21
CCM2-204ENST00000470837 EIF5A2Q9GZV4 153 aaKnown RBP7.51□□□□□ -1.21
CCM2-204ENST00000470837 OR51M1Q9H341 326 aa7.51□□□□□ -1.21
CCM2-204ENST00000470837 ZFAND3Q9H8U3 227 aa7.51□□□□□ -1.21
CCM2-204ENST00000470837 GNG13Q9P2W3 67 aa7.51□□□□□ -1.21
CCM2-204ENST00000470837 PEMTQ9UBM1 199 aa7.51□□□□□ -1.21
CCM2-204ENST00000470837 ZNF98A6NK75 572 aa7.5□□□□□ -1.21
CCM2-204ENST00000470837 K7EMT4 169 aa7.5□□□□□ -1.21
CCM2-204ENST00000470837 CCL24O00175 119 aa7.5□□□□□ -1.21
CCM2-204ENST00000470837 ZNF207O43670 478 aaKnown RBP7.5□□□□□ -1.21
CCM2-204ENST00000470837 ATF4P18848 351 aaPredicted RBP7.5□□□□□ -1.21
CCM2-204ENST00000470837 GCHFRP30047 84 aa7.5□□□□□ -1.21
CCM2-204ENST00000470837 GALR1P47211 349 aa7.5□□□□□ -1.21
CCM2-204ENST00000470837 SYNJ2BPP57105 145 aa7.5□□□□□ -1.21
CCM2-204ENST00000470837 PEA15Q15121 130 aa7.5□□□□□ -1.21
CCM2-204ENST00000470837 DEFB136Q30KP8 78 aa7.5□□□□□ -1.21
CCM2-204ENST00000470837 AWAT1Q58HT5 328 aa7.5□□□□□ -1.21
CCM2-204ENST00000470837 C1orf194Q5T5A4 169 aa7.5□□□□□ -1.21
CCM2-204ENST00000470837 LEMD1Q68G75 181 aa7.5□□□□□ -1.21
CCM2-204ENST00000470837 COMMD7Q86VX2 200 aa7.5□□□□□ -1.21
CCM2-204ENST00000470837 LURAP1LQ8IV03 231 aa7.5□□□□□ -1.21
CCM2-204ENST00000470837 TMEM158Q8WZ71 300 aa7.5□□□□□ -1.21
CCM2-204ENST00000470837 SCRT1Q9BWW7 348 aa7.5□□□□□ -1.21
CCM2-204ENST00000470837 MANBALQ9NQG1 85 aa7.5□□□□□ -1.21
CCM2-204ENST00000470837 TRAV5A0A0B4J249 113 aa7.49□□□□□ -1.21
CCM2-204ENST00000470837 RAB19A4D1S5 217 aa7.49□□□□□ -1.21
CCM2-204ENST00000470837 LINC00862A6NCI5 91 aa7.49□□□□□ -1.21
CCM2-204ENST00000470837 ZNF785A8K8V0 405 aa7.49□□□□□ -1.21
CCM2-204ENST00000470837 LGALS9O00182 355 aa7.49□□□□□ -1.21
CCM2-204ENST00000470837 EIF3GO75821 320 aaKnown RBP eCLIP7.49□□□□□ -1.21
CCM2-204ENST00000470837 PF4P02776 101 aa7.49□□□□□ -1.21
CCM2-204ENST00000470837 OR10J4P0C629 311 aa7.49□□□□□ -1.21
CCM2-204ENST00000470837 CRYBB3P26998 211 aa7.49□□□□□ -1.21
CCM2-204ENST00000470837 UNQ9165/PRO28630Q6UXU0 137 aa7.49□□□□□ -1.21
CCM2-204ENST00000470837 C18orf65Q6ZTR6 163 aa7.49□□□□□ -1.21
CCM2-204ENST00000470837 SSX7Q7RTT5 188 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms