RNA–Protein interactions for RNA: ENST00000470091.1

LINC00173-201, long intergenic non-protein coding RNA 173, humanhuman

TSL 1 (best) BASIC

Gene LINC00173, Length 435 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-201ENST00000470091 DOK5Q9P104 306 aa10.43□□□□□ -0.74
LINC00173-201ENST00000470091 SORL1Q92673 2214 aa10.43□□□□□ -0.74
LINC00173-201ENST00000470091 CTXND1A0A1B0GTU2 59 aa10.42□□□□□ -0.74
LINC00173-201ENST00000470091 MAP1LC3B2A6NCE7 125 aa10.42□□□□□ -0.74
LINC00173-201ENST00000470091 OR2T8A6NH00 312 aa10.42□□□□□ -0.74
LINC00173-201ENST00000470091 FAM223BA6NKX1 122 aa10.42□□□□□ -0.74
LINC00173-201ENST00000470091 H3BUA1 57 aa10.42□□□□□ -0.74
LINC00173-201ENST00000470091 HMGB3O15347 200 aaKnown RBP10.42□□□□□ -0.74
LINC00173-201ENST00000470091 GNG7O60262 68 aa10.42□□□□□ -0.74
LINC00173-201ENST00000470091 ATP6V1G1O75348 118 aa10.42□□□□□ -0.74
LINC00173-201ENST00000470091 IGLV1-40P01703 118 aa10.42□□□□□ -0.74
LINC00173-201ENST00000470091 NPBWR1P48145 328 aa10.42□□□□□ -0.74
LINC00173-201ENST00000470091 CDC34P49427 236 aaPredicted RBP10.42□□□□□ -0.74
LINC00173-201ENST00000470091 SELENOTP62341 195 aa10.42□□□□□ -0.74
LINC00173-201ENST00000470091 ATP5G2Q06055 141 aa10.42□□□□□ -0.74
LINC00173-201ENST00000470091 SPATA31B1PQ5VZV4 182 aa10.42□□□□□ -0.74
LINC00173-201ENST00000470091 SPSB3Q6PJ21 355 aa10.42□□□□□ -0.74
LINC00173-201ENST00000470091 FAM223AQ8IWN6 122 aa10.42□□□□□ -0.74
LINC00173-201ENST00000470091 SFT2D1Q8WV19 159 aa10.42□□□□□ -0.74
LINC00173-201ENST00000470091 EEF1AKMT3Q96AZ1 226 aa10.42□□□□□ -0.74
LINC00173-201ENST00000470091 CCDC140Q96MF4 163 aa10.42□□□□□ -0.74
LINC00173-201ENST00000470091 ACTR3CQ9C0K3 210 aaPredicted RBP10.42□□□□□ -0.74
LINC00173-201ENST00000470091 MAP1LC3BQ9GZQ8 125 aa10.42□□□□□ -0.74
LINC00173-201ENST00000470091 ZNF256Q9Y2P7 627 aaPredicted RBP10.42□□□□□ -0.74
LINC00173-201ENST00000470091 FCGR2BP31994 310 aaPredicted RBP10.41□□□□□ -0.74
LINC00173-201ENST00000470091 GPR183P32249 361 aa10.41□□□□□ -0.74
LINC00173-201ENST00000470091 FGF8P55075 233 aaPredicted RBP10.41□□□□□ -0.74
LINC00173-201ENST00000470091 KIAA0141Q14154 515 aaPredicted RBP10.41□□□□□ -0.74
LINC00173-201ENST00000470091 ZNF491Q8N8L2 437 aa10.41□□□□□ -0.74
LINC00173-201ENST00000470091 LYPD6BQ8NI32 183 aa10.41□□□□□ -0.74
LINC00173-201ENST00000470091 MBD3L1Q8WWY6 194 aa10.41□□□□□ -0.74
LINC00173-201ENST00000470091 RAB24Q969Q5 203 aa10.41□□□□□ -0.74
LINC00173-201ENST00000470091 HUWE1Q7Z6Z7 4374 aaKnown RBP10.4□□□□□ -0.74
LINC00173-201ENST00000470091 I3L521 148 aa10.4□□□□□ -0.74
LINC00173-201ENST00000470091 COX7A2P2O60397 106 aa10.4□□□□□ -0.74
LINC00173-201ENST00000470091 BRI3O95415 125 aa10.4□□□□□ -0.74
LINC00173-201ENST00000470091 PSG1P11464 419 aa10.4□□□□□ -0.74
LINC00173-201ENST00000470091 RAB9AP51151 201 aa10.4□□□□□ -0.74
LINC00173-201ENST00000470091 CCL20P78556 96 aa10.4□□□□□ -0.74
LINC00173-201ENST00000470091 FHL3Q13643 280 aa10.4□□□□□ -0.74
LINC00173-201ENST00000470091 IL34Q6ZMJ4 242 aa10.4□□□□□ -0.74
LINC00173-201ENST00000470091 MARC2Q969Z3 335 aa10.4□□□□□ -0.74
LINC00173-201ENST00000470091 UBE2E2Q96LR5 201 aa10.4□□□□□ -0.74
LINC00173-201ENST00000470091 TXN2Q99757 166 aa10.4□□□□□ -0.74
LINC00173-201ENST00000470091 DNAH7Q8WXX0 4024 aa10.39□□□□□ -0.75
LINC00173-201ENST00000470091 TRAV30A0A087WSZ9 112 aa10.39□□□□□ -0.75
LINC00173-201ENST00000470091 TRAV1-1A0A0B4J248 108 aa10.39□□□□□ -0.75
LINC00173-201ENST00000470091 A0A1W2PPV4 95 aa10.39□□□□□ -0.75
LINC00173-201ENST00000470091 TOMM40O96008 361 aa10.39□□□□□ -0.75
LINC00173-201ENST00000470091 HBE1P02100 147 aa10.39□□□□□ -0.75
LINC00173-201ENST00000470091 FABP1P07148 127 aa10.39□□□□□ -0.75
LINC00173-201ENST00000470091 OR5G3P0C626 314 aa10.39□□□□□ -0.75
LINC00173-201ENST00000470091 RD3LP0DJH9 198 aa10.39□□□□□ -0.75
LINC00173-201ENST00000470091 LYZP61626 148 aa10.39□□□□□ -0.75
LINC00173-201ENST00000470091 RHOBP62745 196 aa10.39□□□□□ -0.75
LINC00173-201ENST00000470091 CLEC19AQ6UXS0 136 aa10.39□□□□□ -0.75
LINC00173-201ENST00000470091 MIR17HGQ75NE6 70 aa10.39□□□□□ -0.75
LINC00173-201ENST00000470091 OR1L4Q8NGR5 311 aa10.39□□□□□ -0.75
LINC00173-201ENST00000470091 OR1B1Q8NGR6 318 aa10.39□□□□□ -0.75
LINC00173-201ENST00000470091 MYOZ3Q8TDC0 251 aa10.39□□□□□ -0.75
LINC00173-201ENST00000470091 TMEM37Q8WXS4 190 aa10.39□□□□□ -0.75
LINC00173-201ENST00000470091 CITED4Q96RK1 184 aa10.39□□□□□ -0.75
LINC00173-201ENST00000470091 CHRDL1Q9BU40 450 aa10.39□□□□□ -0.75
LINC00173-201ENST00000470091 TRBV7-1A0A0A6YYK4 115 aa10.38□□□□□ -0.75
LINC00173-201ENST00000470091 SCGB2A1O75556 95 aa10.38□□□□□ -0.75
LINC00173-201ENST00000470091 IGHV3-11P01762 117 aa10.38□□□□□ -0.75
LINC00173-201ENST00000470091 ORM2P19652 201 aa10.38□□□□□ -0.75
LINC00173-201ENST00000470091 ADMP35318 185 aa10.38□□□□□ -0.75
LINC00173-201ENST00000470091 YPEL3P61236 119 aaPredicted RBP10.38□□□□□ -0.75
LINC00173-201ENST00000470091 FAM78BQ5VT40 261 aa10.38□□□□□ -0.75
LINC00173-201ENST00000470091 C10orf113Q5VZT2 155 aa10.38□□□□□ -0.75
LINC00173-201ENST00000470091 PATE2Q6UY27 113 aa10.38□□□□□ -0.75
LINC00173-201ENST00000470091 IQCF2Q8IXL9 164 aa10.38□□□□□ -0.75
LINC00173-201ENST00000470091 USMG5Q96IX5 58 aa10.38□□□□□ -0.75
LINC00173-201ENST00000470091 SEPSECSQ9HD40 501 aaKnown RBP10.38□□□□□ -0.75
LINC00173-201ENST00000470091 FUT9Q9Y231 359 aa10.38□□□□□ -0.75
LINC00173-201ENST00000470091 SMAD5-AS1Q9Y6J3 95 aa10.38□□□□□ -0.75
LINC00173-201ENST00000470091 TENM2Q9NT68 2774 aa10.38□□□□□ -0.75
LINC00173-201ENST00000470091 PPP5D1E7EU14 171 aa10.37□□□□□ -0.75
LINC00173-201ENST00000470091 OVOL1O14753 267 aa10.37□□□□□ -0.75
LINC00173-201ENST00000470091 NUPL2O15504 423 aaKnown RBP10.37□□□□□ -0.75
LINC00173-201ENST00000470091 TGOLN2O43493 480 aa10.37□□□□□ -0.75
LINC00173-201ENST00000470091 HYPMO75409 117 aa10.37□□□□□ -0.75
LINC00173-201ENST00000470091 SAP30O75446 220 aa10.37□□□□□ -0.75
LINC00173-201ENST00000470091 CLEC3BP05452 202 aa10.37□□□□□ -0.75
LINC00173-201ENST00000470091 CTSGP08311 255 aa10.37□□□□□ -0.75
LINC00173-201ENST00000470091 SLURP1P55000 103 aa10.37□□□□□ -0.75
LINC00173-201ENST00000470091 PLP1P60201 277 aa10.37□□□□□ -0.75
LINC00173-201ENST00000470091 TOR2AQ5JU69 321 aa10.37□□□□□ -0.75
LINC00173-201ENST00000470091 MORN5Q5VZ52 161 aa10.37□□□□□ -0.75
LINC00173-201ENST00000470091 OR51G1Q8NGK1 321 aa10.37□□□□□ -0.75
LINC00173-201ENST00000470091 GATAD1Q8WUU5 269 aa10.37□□□□□ -0.75
LINC00173-201ENST00000470091 DLX4Q92988 240 aaPredicted RBP10.37□□□□□ -0.75
LINC00173-201ENST00000470091 ZNF414Q96IQ9 312 aa10.37□□□□□ -0.75
LINC00173-201ENST00000470091 UHRF2Q96PU4 802 aa10.37□□□□□ -0.75
LINC00173-201ENST00000470091 PFDN5Q99471 154 aa10.37□□□□□ -0.75
LINC00173-201ENST00000470091 PBDC1Q9BVG4 233 aa10.37□□□□□ -0.75
LINC00173-201ENST00000470091 MRPL32Q9BYC8 188 aaKnown RBP10.37□□□□□ -0.75
LINC00173-201ENST00000470091 TMPRSS5Q9H3S3 457 aa10.37□□□□□ -0.75
LINC00173-201ENST00000470091 TMEM231Q9H6L2 316 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms