RNA–Protein interactions for RNA: ENST00000469923.5

SHROOM3-203, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 764 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-203ENST00000469923 C7orf50Q9BRJ6 194 aaKnown RBP6.65□□□□□ -1.34
SHROOM3-203ENST00000469923 CCDC32Q9BV29 185 aa6.65□□□□□ -1.34
SHROOM3-203ENST00000469923 TMED3Q9Y3Q3 217 aa6.65□□□□□ -1.34
SHROOM3-203ENST00000469923 U3KQ87 197 aa6.65□□□□□ -1.34
SHROOM3-203ENST00000469923 TRAV30A0A087WSZ9 112 aa6.64□□□□□ -1.35
SHROOM3-203ENST00000469923 RPS10-NUDT3A0A1W2PQS6 291 aa6.64□□□□□ -1.35
SHROOM3-203ENST00000469923 ZFP92A6NM28 416 aa6.64□□□□□ -1.35
SHROOM3-203ENST00000469923 SOCS3O14543 225 aa6.64□□□□□ -1.35
SHROOM3-203ENST00000469923 SYNGR2O43760 224 aa6.64□□□□□ -1.35
SHROOM3-203ENST00000469923 ID3Q02535 119 aa6.64□□□□□ -1.35
SHROOM3-203ENST00000469923 C4orf46Q504U0 113 aa6.64□□□□□ -1.35
SHROOM3-203ENST00000469923 PATE2Q6UY27 113 aa6.64□□□□□ -1.35
SHROOM3-203ENST00000469923 SIGLEC15Q6ZMC9 328 aa6.64□□□□□ -1.35
SHROOM3-203ENST00000469923 OR4D5Q8NGN0 318 aa6.64□□□□□ -1.35
SHROOM3-203ENST00000469923 C11orf45Q8TAV5 145 aa6.64□□□□□ -1.35
SHROOM3-203ENST00000469923 SEC22CQ9BRL7 303 aa6.64□□□□□ -1.35
SHROOM3-203ENST00000469923 SLC35B3Q9H1N7 401 aa6.64□□□□□ -1.35
SHROOM3-203ENST00000469923 DOK5Q9P104 306 aa6.64□□□□□ -1.35
SHROOM3-203ENST00000469923 TBC1D24Q9ULP9 559 aa6.64□□□□□ -1.35
SHROOM3-203ENST00000469923 TRAV8-2A0A0B4J237 113 aa6.63□□□□□ -1.35
SHROOM3-203ENST00000469923 A0A1W2PS18 150 aa6.63□□□□□ -1.35
SHROOM3-203ENST00000469923 HELTA6NFD8 242 aa6.63□□□□□ -1.35
SHROOM3-203ENST00000469923 SLC25A6P12236 298 aa6.63□□□□□ -1.35
SHROOM3-203ENST00000469923 RRAS2P62070 204 aaPredicted RBP6.63□□□□□ -1.35
SHROOM3-203ENST00000469923 C12orf74Q32Q52 190 aa6.63□□□□□ -1.35
SHROOM3-203ENST00000469923 Q6ZTC4 211 aa6.63□□□□□ -1.35
SHROOM3-203ENST00000469923 RNF182Q8N6D2 247 aa6.63□□□□□ -1.35
SHROOM3-203ENST00000469923 THAP8Q8NA92 274 aa6.63□□□□□ -1.35
SHROOM3-203ENST00000469923 COQ8AQ8NI60 647 aa6.63□□□□□ -1.35
SHROOM3-203ENST00000469923 RSG1Q9BU20 258 aa6.63□□□□□ -1.35
SHROOM3-203ENST00000469923 C20orf85Q9H1P6 137 aa6.63□□□□□ -1.35
SHROOM3-203ENST00000469923 SLC25A32Q9H2D1 315 aa6.63□□□□□ -1.35
SHROOM3-203ENST00000469923 APLNQ9ULZ1 77 aa6.63□□□□□ -1.35
SHROOM3-203ENST00000469923 TRAV2A0A0B4J234 112 aa6.62□□□□□ -1.35
SHROOM3-203ENST00000469923 H3BTX0 84 aa6.62□□□□□ -1.35
SHROOM3-203ENST00000469923 H2AFB2P0C5Z0 115 aa6.62□□□□□ -1.35
SHROOM3-203ENST00000469923 METTL15P1P0C7V9 234 aa6.62□□□□□ -1.35
SHROOM3-203ENST00000469923 ORM2P19652 201 aa6.62□□□□□ -1.35
SHROOM3-203ENST00000469923 EIF2B2P49770 351 aaKnown RBP6.62□□□□□ -1.35
SHROOM3-203ENST00000469923 CMC4P56277 68 aaPredicted RBP6.62□□□□□ -1.35
SHROOM3-203ENST00000469923 MORN5Q5VZ52 161 aa6.62□□□□□ -1.35
SHROOM3-203ENST00000469923 OR8G2PQ6IF36 304 aa6.62□□□□□ -1.35
SHROOM3-203ENST00000469923 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.62□□□□□ -1.35
SHROOM3-203ENST00000469923 ACOT7LQ6ZUV0 252 aa6.62□□□□□ -1.35
SHROOM3-203ENST00000469923 C1orf158Q8N1D5 194 aa6.62□□□□□ -1.35
SHROOM3-203ENST00000469923 MITD1Q8WV92 249 aa6.62□□□□□ -1.35
SHROOM3-203ENST00000469923 GRAMD2BQ96HH9 432 aa6.62□□□□□ -1.35
SHROOM3-203ENST00000469923 KRTAP17-1Q9BYP8 105 aa6.62□□□□□ -1.35
SHROOM3-203ENST00000469923 NRN1Q9NPD7 142 aa6.62□□□□□ -1.35
SHROOM3-203ENST00000469923 GSKIPQ9P0R6 139 aa6.62□□□□□ -1.35
SHROOM3-203ENST00000469923 RYR1P21817 5038 aa6.61□□□□□ -1.35
SHROOM3-203ENST00000469923 IGHV3OR16-12A0A075B7B8 117 aa6.61□□□□□ -1.35
SHROOM3-203ENST00000469923 FAM240BA0A1B0GVZ2 78 aa6.61□□□□□ -1.35
SHROOM3-203ENST00000469923 ZNF98A6NK75 572 aa6.61□□□□□ -1.35
SHROOM3-203ENST00000469923 ZNF705EA8MWA4 302 aaPredicted RBP6.61□□□□□ -1.35
SHROOM3-203ENST00000469923 SNRPGP15A8MWD9 76 aa6.61□□□□□ -1.35
SHROOM3-203ENST00000469923 IGLL5B9A064 214 aa6.61□□□□□ -1.35
SHROOM3-203ENST00000469923 SSSCA1O60232 199 aa6.61□□□□□ -1.35
SHROOM3-203ENST00000469923 MED6O75586 246 aa6.61□□□□□ -1.35
SHROOM3-203ENST00000469923 JTBO76095 146 aa6.61□□□□□ -1.35
SHROOM3-203ENST00000469923 IFNA21P01568 189 aa6.61□□□□□ -1.35
SHROOM3-203ENST00000469923 MBPP02686 304 aaPredicted RBP6.61□□□□□ -1.35
SHROOM3-203ENST00000469923 EMP1P54849 157 aa6.61□□□□□ -1.35
SHROOM3-203ENST00000469923 DEFA1P59665 94 aa6.61□□□□□ -1.35
SHROOM3-203ENST00000469923 DEFA3P59666 94 aa6.61□□□□□ -1.35
SHROOM3-203ENST00000469923 KIR3DS1Q14943 382 aa6.61□□□□□ -1.35
SHROOM3-203ENST00000469923 RGS21Q2M5E4 152 aa6.61□□□□□ -1.35
SHROOM3-203ENST00000469923 ETFRF1Q6IPR1 90 aa6.61□□□□□ -1.35
SHROOM3-203ENST00000469923 NOXA1Q86UR1 476 aa6.61□□□□□ -1.35
SHROOM3-203ENST00000469923 ZNF709Q8N972 641 aa6.61□□□□□ -1.35
SHROOM3-203ENST00000469923 GATAD1Q8WUU5 269 aa6.61□□□□□ -1.35
SHROOM3-203ENST00000469923 SLC35E1Q96K37 410 aa6.61□□□□□ -1.35
SHROOM3-203ENST00000469923 UHRF2Q96PU4 802 aa6.61□□□□□ -1.35
SHROOM3-203ENST00000469923 TRGV9Q99603 122 aa6.61□□□□□ -1.35
SHROOM3-203ENST00000469923 TMEM231Q9H6L2 316 aa6.61□□□□□ -1.35
SHROOM3-203ENST00000469923 SLC25A22Q9H936 323 aa6.61□□□□□ -1.35
SHROOM3-203ENST00000469923 NUDT15Q9NV35 164 aa6.61□□□□□ -1.35
SHROOM3-203ENST00000469923 PSENENQ9NZ42 101 aa6.61□□□□□ -1.35
SHROOM3-203ENST00000469923 CACFD1Q9UGQ2 172 aa6.61□□□□□ -1.35
SHROOM3-203ENST00000469923 RCL1Q9Y2P8 373 aaKnown RBP6.61□□□□□ -1.35
SHROOM3-203ENST00000469923 TRAV5A0A0B4J249 113 aa6.6□□□□□ -1.35
SHROOM3-203ENST00000469923 PIGBOS1A0A0B4J2F0 54 aa6.6□□□□□ -1.35
SHROOM3-203ENST00000469923 SMCO3A2RU48 225 aa6.6□□□□□ -1.35
SHROOM3-203ENST00000469923 PRAC2D3DTV9 90 aa6.6□□□□□ -1.35
SHROOM3-203ENST00000469923 SCGB1D2O95969 90 aa6.6□□□□□ -1.35
SHROOM3-203ENST00000469923 NKX2-1P43699 371 aaPredicted RBP6.6□□□□□ -1.35
SHROOM3-203ENST00000469923 RAB11AP62491 216 aa6.6□□□□□ -1.35
SHROOM3-203ENST00000469923 ASAH1Q13510 395 aa6.6□□□□□ -1.35
SHROOM3-203ENST00000469923 FCN2Q15485 313 aa6.6□□□□□ -1.35
SHROOM3-203ENST00000469923 IAH1Q2TAA2 248 aaPredicted RBP6.6□□□□□ -1.35
SHROOM3-203ENST00000469923 FAM78BQ5VT40 261 aa6.6□□□□□ -1.35
SHROOM3-203ENST00000469923 TMEM14EPQ6UXP3 125 aa6.6□□□□□ -1.35
SHROOM3-203ENST00000469923 OR8I2Q8N0Y5 310 aa6.6□□□□□ -1.35
SHROOM3-203ENST00000469923 C12orf45Q8N5I9 185 aaPredicted RBP6.6□□□□□ -1.35
SHROOM3-203ENST00000469923 ZBTB8BQ8NAP8 495 aaPredicted RBP6.6□□□□□ -1.35
SHROOM3-203ENST00000469923 OR4B1Q8NGF8 309 aa6.6□□□□□ -1.35
SHROOM3-203ENST00000469923 OR1B1Q8NGR6 318 aa6.6□□□□□ -1.35
SHROOM3-203ENST00000469923 ZNF431Q8TF32 576 aaPredicted RBP6.6□□□□□ -1.35
SHROOM3-203ENST00000469923 PARD6GQ9BYG4 376 aaPredicted RBP6.6□□□□□ -1.35
SHROOM3-203ENST00000469923 C11orf1Q9H5F2 150 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms