RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 ESDP10768 282 aa7.59□□□□□ -1.19
TOP3A-203ENST00000469739 ZNF672Q499Z4 452 aaPredicted RBP7.59□□□□□ -1.19
TOP3A-203ENST00000469739 SHISA2Q6UWI4 295 aa7.59□□□□□ -1.19
TOP3A-203ENST00000469739 BAGE3Q86Y29 109 aa7.59□□□□□ -1.19
TOP3A-203ENST00000469739 BAGE2Q86Y30 109 aa7.59□□□□□ -1.19
TOP3A-203ENST00000469739 SIGLECL1Q8N7X8 197 aa7.59□□□□□ -1.19
TOP3A-203ENST00000469739 OR1L8Q8NGR8 309 aa7.59□□□□□ -1.19
TOP3A-203ENST00000469739 SGMS2Q8NHU3 365 aa7.59□□□□□ -1.19
TOP3A-203ENST00000469739 FBXL7Q9UJT9 491 aa7.59□□□□□ -1.19
TOP3A-203ENST00000469739 PPIAL4CA0A0B4J2A2 164 aa7.59□□□□□ -1.2
TOP3A-203ENST00000469739 CLEC3BP05452 202 aa7.59□□□□□ -1.2
TOP3A-203ENST00000469739 PPIAL4GP0DN37 164 aa7.59□□□□□ -1.2
TOP3A-203ENST00000469739 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.59□□□□□ -1.2
TOP3A-203ENST00000469739 ZNF586Q9NXT0 402 aa7.59□□□□□ -1.2
TOP3A-203ENST00000469739 A0A1W2PPI3 338 aa7.58□□□□□ -1.2
TOP3A-203ENST00000469739 CGB1A6NKQ9 187 aa7.58□□□□□ -1.2
TOP3A-203ENST00000469739 CA1P00915 261 aaPredicted RBP7.58□□□□□ -1.2
TOP3A-203ENST00000469739 PPOXP50336 477 aa7.58□□□□□ -1.2
TOP3A-203ENST00000469739 ADORA2A-AS1P86434 159 aa7.58□□□□□ -1.2
TOP3A-203ENST00000469739 HES1Q14469 280 aa7.58□□□□□ -1.2
TOP3A-203ENST00000469739 KLF17Q5JT82 389 aaPredicted RBP7.58□□□□□ -1.2
TOP3A-203ENST00000469739 OR5AN1Q8NGI8 311 aa7.58□□□□□ -1.2
TOP3A-203ENST00000469739 TMEM133Q9H2Q1 129 aa7.58□□□□□ -1.2
TOP3A-203ENST00000469739 SERTAD4Q9NUC0 356 aa7.58□□□□□ -1.2
TOP3A-203ENST00000469739 WASHC3Q9Y3C0 194 aa7.58□□□□□ -1.2
TOP3A-203ENST00000469739 IGHV2-26A0A0B4J1V2 119 aa7.58□□□□□ -1.2
TOP3A-203ENST00000469739 TSPOP30536 169 aa7.58□□□□□ -1.2
TOP3A-203ENST00000469739 MEF2CQ06413 473 aaPredicted RBP7.58□□□□□ -1.2
TOP3A-203ENST00000469739 FOXL1Q12952 345 aa7.58□□□□□ -1.2
TOP3A-203ENST00000469739 TMEM155Q4W5P6 130 aa7.58□□□□□ -1.2
TOP3A-203ENST00000469739 KLHDC1Q8N7A1 406 aa7.58□□□□□ -1.2
TOP3A-203ENST00000469739 ASCL2Q99929 193 aa7.58□□□□□ -1.2
TOP3A-203ENST00000469739 RNASE7Q9H1E1 156 aaKnown RBP7.58□□□□□ -1.2
TOP3A-203ENST00000469739 RNF114Q9Y508 228 aa7.58□□□□□ -1.2
TOP3A-203ENST00000469739 MPDU1O75352 247 aa7.57□□□□□ -1.2
TOP3A-203ENST00000469739 CA7P43166 264 aa7.57□□□□□ -1.2
TOP3A-203ENST00000469739 YPEL3P61236 119 aaPredicted RBP7.57□□□□□ -1.2
TOP3A-203ENST00000469739 PRR27Q6MZM9 219 aa7.57□□□□□ -1.2
TOP3A-203ENST00000469739 PQLC2Q6ZP29 291 aa7.57□□□□□ -1.2
TOP3A-203ENST00000469739 Q8N976 141 aa7.57□□□□□ -1.2
TOP3A-203ENST00000469739 TMEM116Q8NCL8 245 aa7.57□□□□□ -1.2
TOP3A-203ENST00000469739 OR1B1Q8NGR6 318 aa7.57□□□□□ -1.2
TOP3A-203ENST00000469739 OSR1Q8TAX0 266 aaPredicted RBP7.57□□□□□ -1.2
TOP3A-203ENST00000469739 RPEQ96AT9 228 aa7.57□□□□□ -1.2
TOP3A-203ENST00000469739 SLC25A33Q9BSK2 321 aa7.57□□□□□ -1.2
TOP3A-203ENST00000469739 MDFIC2A0A1B0GVS7 189 aa7.57□□□□□ -1.2
TOP3A-203ENST00000469739 UQCRFS1P47985 274 aa7.57□□□□□ -1.2
TOP3A-203ENST00000469739 CD69Q07108 199 aa7.57□□□□□ -1.2
TOP3A-203ENST00000469739 NDUFA4L2Q9NRX3 87 aa7.57□□□□□ -1.2
TOP3A-203ENST00000469739 MRPS16Q9Y3D3 137 aaKnown RBP7.57□□□□□ -1.2
TOP3A-203ENST00000469739 CCDC168Q8NDH2 2452 aa7.57□□□□□ -1.2
TOP3A-203ENST00000469739 LOC102724200A0A096LPH7 203 aaPredicted RBP7.57□□□□□ -1.2
TOP3A-203ENST00000469739 FAM90A9PA6NNJ1 464 aa7.57□□□□□ -1.2
TOP3A-203ENST00000469739 CNIH1O95406 144 aa7.57□□□□□ -1.2
TOP3A-203ENST00000469739 UBE2L3P68036 154 aaKnown RBP7.57□□□□□ -1.2
TOP3A-203ENST00000469739 OR5B3Q8NH48 314 aa7.57□□□□□ -1.2
TOP3A-203ENST00000469739 ZNF503Q96F45 646 aa7.57□□□□□ -1.2
TOP3A-203ENST00000469739 IGHV3OR16-8A0A075B7F1 116 aa7.56□□□□□ -1.2
TOP3A-203ENST00000469739 K7EN84 100 aa7.56□□□□□ -1.2
TOP3A-203ENST00000469739 COX7A2P2O60397 106 aa7.56□□□□□ -1.2
TOP3A-203ENST00000469739 CD99P14209 185 aa7.56□□□□□ -1.2
TOP3A-203ENST00000469739 CBLN1P23435 193 aa7.56□□□□□ -1.2
TOP3A-203ENST00000469739 GNG5P63218 68 aa7.56□□□□□ -1.2
TOP3A-203ENST00000469739 PRR20EP86478 221 aa7.56□□□□□ -1.2
TOP3A-203ENST00000469739 PRR20CP86479 221 aa7.56□□□□□ -1.2
TOP3A-203ENST00000469739 PRR20DP86480 221 aa7.56□□□□□ -1.2
TOP3A-203ENST00000469739 PRR20BP86481 221 aa7.56□□□□□ -1.2
TOP3A-203ENST00000469739 PRR20AP86496 221 aa7.56□□□□□ -1.2
TOP3A-203ENST00000469739 SMIM12Q96EX1 92 aa7.56□□□□□ -1.2
TOP3A-203ENST00000469739 SSBP3Q9BWW4 388 aaPredicted RBP7.56□□□□□ -1.2
TOP3A-203ENST00000469739 IGHV3-35A0A0C4DH35 117 aa7.56□□□□□ -1.2
TOP3A-203ENST00000469739 A0A1W2PPR1 153 aa7.56□□□□□ -1.2
TOP3A-203ENST00000469739 F2Z2F3 143 aa7.56□□□□□ -1.2
TOP3A-203ENST00000469739 K7ERU9 68 aa7.56□□□□□ -1.2
TOP3A-203ENST00000469739 PDE6DO43924 150 aa7.56□□□□□ -1.2
TOP3A-203ENST00000469739 IGLV2-23P01705 113 aa7.56□□□□□ -1.2
TOP3A-203ENST00000469739 GPX1P07203 203 aa7.56□□□□□ -1.2
TOP3A-203ENST00000469739 USF1P22415 310 aaPredicted RBP7.56□□□□□ -1.2
TOP3A-203ENST00000469739 VMA21Q3ZAQ7 101 aa7.56□□□□□ -1.2
TOP3A-203ENST00000469739 ST6GALNAC6Q969X2 333 aa7.56□□□□□ -1.2
TOP3A-203ENST00000469739 TMEM186Q96B77 213 aa7.56□□□□□ -1.2
TOP3A-203ENST00000469739 SFRP2Q96HF1 295 aa7.56□□□□□ -1.2
TOP3A-203ENST00000469739 KCNIP2Q9NS61 270 aa7.56□□□□□ -1.2
TOP3A-203ENST00000469739 ZNF355PQ9NSJ1 428 aa7.56□□□□□ -1.2
TOP3A-203ENST00000469739 SONP18583 2426 aaKnown RBP7.56□□□□□ -1.2
TOP3A-203ENST00000469739 GGTLC3B5MD39 225 aa7.55□□□□□ -1.2
TOP3A-203ENST00000469739 PSG1P11464 419 aa7.55□□□□□ -1.2
TOP3A-203ENST00000469739 MFAP2P55001 183 aa7.55□□□□□ -1.2
TOP3A-203ENST00000469739 DLX6P56179 175 aa7.55□□□□□ -1.2
TOP3A-203ENST00000469739 KLRB1Q12918 225 aa7.55□□□□□ -1.2
TOP3A-203ENST00000469739 CENPWQ5EE01 88 aa7.55□□□□□ -1.2
TOP3A-203ENST00000469739 HIST2H2BCQ6DN03 193 aa7.55□□□□□ -1.2
TOP3A-203ENST00000469739 HIST2H2BDQ6DRA6 164 aa7.55□□□□□ -1.2
TOP3A-203ENST00000469739 WNT10AQ9GZT5 417 aa7.55□□□□□ -1.2
TOP3A-203ENST00000469739 MRPL18Q9H0U6 180 aaKnown RBP7.55□□□□□ -1.2
TOP3A-203ENST00000469739 TBL2Q9Y4P3 447 aaKnown RBP7.55□□□□□ -1.2
TOP3A-203ENST00000469739 TIMM23O14925 209 aa7.55□□□□□ -1.2
TOP3A-203ENST00000469739 ZNF253O75346 499 aa7.55□□□□□ -1.2
TOP3A-203ENST00000469739 IGHV3-23P01764 117 aa7.55□□□□□ -1.2
TOP3A-203ENST00000469739 RPS20P60866 119 aaKnown RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms