RNA–Protein interactions for RNA: ENST00000469534.1

ITGA6-208, Transcript of integrin subunit alpha 6, humanhuman

TSL 2

Gene ITGA6, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-208ENST00000469534 PUS1Q9Y606 427 aaKnown RBP eCLIP4.03□□□□□ -1.76
ITGA6-208ENST00000469534 MXRA5Q9NR99 2828 aa4.02□□□□□ -1.77
ITGA6-208ENST00000469534 ZNF320A2RRD8 509 aa4.02□□□□□ -1.77
ITGA6-208ENST00000469534 CLPSL1A2RUU4 121 aa4.02□□□□□ -1.77
ITGA6-208ENST00000469534 FAM223BA6NKX1 122 aa4.02□□□□□ -1.77
ITGA6-208ENST00000469534 BMPR1BO00238 502 aa4.02□□□□□ -1.77
ITGA6-208ENST00000469534 NUPL2O15504 423 aaKnown RBP4.02□□□□□ -1.77
ITGA6-208ENST00000469534 TGOLN2O43493 480 aa4.02□□□□□ -1.77
ITGA6-208ENST00000469534 IL4P05112 153 aa4.02□□□□□ -1.77
ITGA6-208ENST00000469534 CTSGP08311 255 aa4.02□□□□□ -1.77
ITGA6-208ENST00000469534 SEC11BP0C7V7 166 aa4.02□□□□□ -1.77
ITGA6-208ENST00000469534 RD3LP0DJH9 198 aa4.02□□□□□ -1.77
ITGA6-208ENST00000469534 SULT1A2P50226 295 aa4.02□□□□□ -1.77
ITGA6-208ENST00000469534 ATP5IP56385 69 aaPredicted RBP4.02□□□□□ -1.77
ITGA6-208ENST00000469534 RPL15P61313 204 aaKnown RBP4.02□□□□□ -1.77
ITGA6-208ENST00000469534 CCL20P78556 96 aa4.02□□□□□ -1.77
ITGA6-208ENST00000469534 FOXE3Q13461 319 aa4.02□□□□□ -1.77
ITGA6-208ENST00000469534 USF2Q15853 346 aaPredicted RBP4.02□□□□□ -1.77
ITGA6-208ENST00000469534 ACOT6Q3I5F7 207 aaPredicted RBP4.02□□□□□ -1.77
ITGA6-208ENST00000469534 KRTAP24-1Q3LI83 254 aa4.02□□□□□ -1.77
ITGA6-208ENST00000469534 TMEM41BQ5BJD5 291 aa4.02□□□□□ -1.77
ITGA6-208ENST00000469534 PXDC1Q5TGL8 231 aa4.02□□□□□ -1.77
ITGA6-208ENST00000469534 FAM78BQ5VT40 261 aa4.02□□□□□ -1.77
ITGA6-208ENST00000469534 TEX38Q6PEX7 206 aa4.02□□□□□ -1.77
ITGA6-208ENST00000469534 UNQ9165/PRO28630Q6UXU0 137 aa4.02□□□□□ -1.77
ITGA6-208ENST00000469534 PATE2Q6UY27 113 aa4.02□□□□□ -1.77
ITGA6-208ENST00000469534 FAM223AQ8IWN6 122 aa4.02□□□□□ -1.77
ITGA6-208ENST00000469534 SLC7A5P1Q8MH63 180 aa4.02□□□□□ -1.77
ITGA6-208ENST00000469534 Q8N1X5 172 aa4.02□□□□□ -1.77
ITGA6-208ENST00000469534 ZNF491Q8N8L2 437 aa4.02□□□□□ -1.77
ITGA6-208ENST00000469534 TMEM116Q8NCL8 245 aa4.02□□□□□ -1.77
ITGA6-208ENST00000469534 OR4F5Q8NH21 305 aa4.02□□□□□ -1.77
ITGA6-208ENST00000469534 VN1R17PQ8TDU5 208 aa4.02□□□□□ -1.77
ITGA6-208ENST00000469534 GATAD1Q8WUU5 269 aa4.02□□□□□ -1.77
ITGA6-208ENST00000469534 GNPNAT1Q96EK6 184 aaPredicted RBP4.02□□□□□ -1.77
ITGA6-208ENST00000469534 WWC2-AS2Q96NR7 200 aa4.02□□□□□ -1.77
ITGA6-208ENST00000469534 TRGV9Q99603 122 aa4.02□□□□□ -1.77
ITGA6-208ENST00000469534 SCRT1Q9BWW7 348 aa4.02□□□□□ -1.77
ITGA6-208ENST00000469534 HRH4Q9H3N8 390 aa4.02□□□□□ -1.77
ITGA6-208ENST00000469534 TMEM231Q9H6L2 316 aa4.02□□□□□ -1.77
ITGA6-208ENST00000469534 IGKV3-7A0A075B6H7 116 aa4.01□□□□□ -1.77
ITGA6-208ENST00000469534 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.01□□□□□ -1.77
ITGA6-208ENST00000469534 TRBV7-1A0A0A6YYK4 115 aa4.01□□□□□ -1.77
ITGA6-208ENST00000469534 A0A1W2PPV4 95 aa4.01□□□□□ -1.77
ITGA6-208ENST00000469534 MAP1LC3B2A6NCE7 125 aa4.01□□□□□ -1.77
ITGA6-208ENST00000469534 FNDC10F2Z333 226 aa4.01□□□□□ -1.77
ITGA6-208ENST00000469534 H3BUA1 57 aa4.01□□□□□ -1.77
ITGA6-208ENST00000469534 SCAF4O95104 1147 aaKnown RBP4.01□□□□□ -1.77
ITGA6-208ENST00000469534 NDUFA7O95182 113 aa4.01□□□□□ -1.77
ITGA6-208ENST00000469534 TOMM40O96008 361 aa4.01□□□□□ -1.77
ITGA6-208ENST00000469534 APOHP02749 345 aaPredicted RBP4.01□□□□□ -1.77
ITGA6-208ENST00000469534 ELANEP08246 267 aa4.01□□□□□ -1.77
ITGA6-208ENST00000469534 NMBP08949 121 aa4.01□□□□□ -1.77
ITGA6-208ENST00000469534 LGALS1P09382 135 aaKnown RBP4.01□□□□□ -1.77
ITGA6-208ENST00000469534 OR10J4P0C629 311 aa4.01□□□□□ -1.77
ITGA6-208ENST00000469534 PYYP10082 97 aa4.01□□□□□ -1.77
ITGA6-208ENST00000469534 M6PRP20645 277 aa4.01□□□□□ -1.77
ITGA6-208ENST00000469534 FCGR2BP31994 310 aaPredicted RBP4.01□□□□□ -1.77
ITGA6-208ENST00000469534 RPL29P47914 159 aaKnown RBP4.01□□□□□ -1.77
ITGA6-208ENST00000469534 CDC34P49427 236 aaPredicted RBP4.01□□□□□ -1.77
ITGA6-208ENST00000469534 UBE2G2P60604 165 aa4.01□□□□□ -1.77
ITGA6-208ENST00000469534 RAB14P61106 215 aa4.01□□□□□ -1.77
ITGA6-208ENST00000469534 HAGHQ16775 308 aa4.01□□□□□ -1.77
ITGA6-208ENST00000469534 TM4SF20Q53R12 229 aa4.01□□□□□ -1.77
ITGA6-208ENST00000469534 C10orf113Q5VZT2 155 aa4.01□□□□□ -1.77
ITGA6-208ENST00000469534 ZNF343Q6P1L6 599 aa4.01□□□□□ -1.77
ITGA6-208ENST00000469534 TOMM20LQ6UXN7 152 aa4.01□□□□□ -1.77
ITGA6-208ENST00000469534 ZNF600Q6ZNG1 722 aa4.01□□□□□ -1.77
ITGA6-208ENST00000469534 ZNF767PQ75MW2 155 aa4.01□□□□□ -1.77
ITGA6-208ENST00000469534 RPP25LQ8N5L8 163 aaKnown RBP4.01□□□□□ -1.77
ITGA6-208ENST00000469534 Q8WTZ3 238 aa4.01□□□□□ -1.77
ITGA6-208ENST00000469534 SFT2D1Q8WV19 159 aa4.01□□□□□ -1.77
ITGA6-208ENST00000469534 TMEM37Q8WXS4 190 aa4.01□□□□□ -1.77
ITGA6-208ENST00000469534 RAB24Q969Q5 203 aa4.01□□□□□ -1.77
ITGA6-208ENST00000469534 RNF125Q96EQ8 232 aa4.01□□□□□ -1.77
ITGA6-208ENST00000469534 PSMG3Q9BT73 122 aaPredicted RBP4.01□□□□□ -1.77
ITGA6-208ENST00000469534 PARD6GQ9BYG4 376 aaPredicted RBP4.01□□□□□ -1.77
ITGA6-208ENST00000469534 ACTR3CQ9C0K3 210 aaPredicted RBP4.01□□□□□ -1.77
ITGA6-208ENST00000469534 MAP1LC3BQ9GZQ8 125 aa4.01□□□□□ -1.77
ITGA6-208ENST00000469534 C16orf95Q9H693 158 aa4.01□□□□□ -1.77
ITGA6-208ENST00000469534 SEPSECSQ9HD40 501 aaKnown RBP4.01□□□□□ -1.77
ITGA6-208ENST00000469534 PEF1Q9UBV8 284 aaKnown RBP4.01□□□□□ -1.77
ITGA6-208ENST00000469534 TIMM9Q9Y5J7 89 aa4.01□□□□□ -1.77
ITGA6-208ENST00000469534 NSD1Q96L73 2696 aaPredicted RBP4.01□□□□□ -1.77
ITGA6-208ENST00000469534 C2CD3Q4AC94 2353 aa4□□□□□ -1.77
ITGA6-208ENST00000469534 CUBNO60494 3623 aa4□□□□□ -1.77
ITGA6-208ENST00000469534 TRAV30A0A087WSZ9 112 aa4□□□□□ -1.77
ITGA6-208ENST00000469534 A0A0G2JLM5 398 aa4□□□□□ -1.77
ITGA6-208ENST00000469534 CTXND1A0A1B0GTU2 59 aa4□□□□□ -1.77
ITGA6-208ENST00000469534 WI2-2373I1.2A0A1W2PRP0 233 aa4□□□□□ -1.77
ITGA6-208ENST00000469534 OR7C2O60412 319 aa4□□□□□ -1.77
ITGA6-208ENST00000469534 MPDU1O75352 247 aa4□□□□□ -1.77
ITGA6-208ENST00000469534 HYPMO75409 117 aa4□□□□□ -1.77
ITGA6-208ENST00000469534 ARL14EPLP0DKL9 152 aa4□□□□□ -1.77
ITGA6-208ENST00000469534 SYNJ2BPP57105 145 aa4□□□□□ -1.77
ITGA6-208ENST00000469534 PROK1P58294 105 aa4□□□□□ -1.77
ITGA6-208ENST00000469534 RPEL1Q2QD12 228 aa4□□□□□ -1.77
ITGA6-208ENST00000469534 AWAT1Q58HT5 328 aa4□□□□□ -1.77
ITGA6-208ENST00000469534 EIF5AL1Q6IS14 154 aaKnown RBP4□□□□□ -1.77
ITGA6-208ENST00000469534 SPSB3Q6PJ21 355 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms