RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 PSMB3P49720 205 aa8.67□□□□□ -1.02
HDAC3-204ENST00000469207 CCR6P51684 374 aa8.67□□□□□ -1.02
HDAC3-204ENST00000469207 SSBP1Q04837 148 aaKnown RBP8.67□□□□□ -1.02
HDAC3-204ENST00000469207 IL18Q14116 193 aa8.67□□□□□ -1.02
HDAC3-204ENST00000469207 SMCO1Q147U7 214 aa8.67□□□□□ -1.02
HDAC3-204ENST00000469207 TMEM182Q6ZP80 229 aaPredicted RBP8.67□□□□□ -1.02
HDAC3-204ENST00000469207 NOXA1Q86UR1 476 aa8.67□□□□□ -1.02
HDAC3-204ENST00000469207 OR8I2Q8N0Y5 310 aa8.67□□□□□ -1.02
HDAC3-204ENST00000469207 C15orf40Q8WUR7 153 aa8.67□□□□□ -1.02
HDAC3-204ENST00000469207 SMIM4Q8WVI0 70 aa8.67□□□□□ -1.02
HDAC3-204ENST00000469207 PPP1R14BQ96C90 147 aa8.67□□□□□ -1.02
HDAC3-204ENST00000469207 KCNIP3Q9Y2W7 256 aa8.67□□□□□ -1.02
HDAC3-204ENST00000469207 ZNF705GA8MUZ8 300 aaPredicted RBP8.66□□□□□ -1.02
HDAC3-204ENST00000469207 SNRPGP15A8MWD9 76 aa8.66□□□□□ -1.02
HDAC3-204ENST00000469207 IAPPP10997 89 aa8.66□□□□□ -1.02
HDAC3-204ENST00000469207 GPX4P36969 197 aaPredicted RBP8.66□□□□□ -1.02
HDAC3-204ENST00000469207 PAX9P55771 341 aa8.66□□□□□ -1.02
HDAC3-204ENST00000469207 FCN2Q15485 313 aa8.66□□□□□ -1.02
HDAC3-204ENST00000469207 C1orf134Q5TEV5 83 aa8.66□□□□□ -1.02
HDAC3-204ENST00000469207 OR8G2PQ6IF36 304 aa8.66□□□□□ -1.02
HDAC3-204ENST00000469207 EBLN2Q6P2I7 272 aa8.66□□□□□ -1.02
HDAC3-204ENST00000469207 OR1S1Q8NH92 325 aa8.66□□□□□ -1.02
HDAC3-204ENST00000469207 IL22RA2Q969J5 263 aa8.66□□□□□ -1.02
HDAC3-204ENST00000469207 DIRAS2Q96HU8 199 aa8.66□□□□□ -1.02
HDAC3-204ENST00000469207 SLC35E1Q96K37 410 aa8.66□□□□□ -1.02
HDAC3-204ENST00000469207 PRRT1Q99946 306 aa8.66□□□□□ -1.02
HDAC3-204ENST00000469207 RSG1Q9BU20 258 aa8.66□□□□□ -1.02
HDAC3-204ENST00000469207 MAGT1Q9H0U3 335 aa8.66□□□□□ -1.02
HDAC3-204ENST00000469207 PAIP2BQ9ULR5 123 aaKnown RBP8.66□□□□□ -1.02
HDAC3-204ENST00000469207 GOLT1BQ9Y3E0 138 aa8.66□□□□□ -1.02
HDAC3-204ENST00000469207 A0A0B4J2A0 478 aa8.65□□□□□ -1.02
HDAC3-204ENST00000469207 ANKRD20A5PA0PJZ0 165 aa8.65□□□□□ -1.02
HDAC3-204ENST00000469207 DAD1P61803 113 aa8.65□□□□□ -1.02
HDAC3-204ENST00000469207 TNP2Q05952 138 aa8.65□□□□□ -1.02
HDAC3-204ENST00000469207 RRN3P1Q2M238 152 aa8.65□□□□□ -1.02
HDAC3-204ENST00000469207 RNF212Q495C1 297 aa8.65□□□□□ -1.02
HDAC3-204ENST00000469207 AMTNQ6UX39 209 aa8.65□□□□□ -1.02
HDAC3-204ENST00000469207 FAM210BQ96KR6 192 aa8.65□□□□□ -1.02
HDAC3-204ENST00000469207 C16orf92Q96LL3 132 aa8.65□□□□□ -1.02
HDAC3-204ENST00000469207 CLUHP3Q96NS8 147 aa8.65□□□□□ -1.02
HDAC3-204ENST00000469207 SLC25A32Q9H2D1 315 aa8.65□□□□□ -1.02
HDAC3-204ENST00000469207 SLC25A22Q9H936 323 aa8.65□□□□□ -1.02
HDAC3-204ENST00000469207 MCUBQ9NWR8 336 aa8.65□□□□□ -1.02
HDAC3-204ENST00000469207 SHPKQ9UHJ6 478 aa8.65□□□□□ -1.02
HDAC3-204ENST00000469207 M0R2Z0 102 aa8.64□□□□□ -1.03
HDAC3-204ENST00000469207 ISLRO14498 428 aa8.64□□□□□ -1.03
HDAC3-204ENST00000469207 CRXO43186 299 aaPredicted RBP8.64□□□□□ -1.03
HDAC3-204ENST00000469207 PITX3O75364 302 aa8.64□□□□□ -1.03
HDAC3-204ENST00000469207 AZU1P20160 251 aa8.64□□□□□ -1.03
HDAC3-204ENST00000469207 MRPS10P82664 201 aaKnown RBP8.64□□□□□ -1.03
HDAC3-204ENST00000469207 OXA1LQ15070 435 aa8.64□□□□□ -1.03
HDAC3-204ENST00000469207 SPINK13Q1W4C9 94 aa8.64□□□□□ -1.03
HDAC3-204ENST00000469207 C1orf194Q5T5A4 169 aa8.64□□□□□ -1.03
HDAC3-204ENST00000469207 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.64□□□□□ -1.03
HDAC3-204ENST00000469207 TRGV9Q99603 122 aa8.64□□□□□ -1.03
HDAC3-204ENST00000469207 RPRMQ9NS64 109 aa8.64□□□□□ -1.03
HDAC3-204ENST00000469207 DOK5Q9P104 306 aa8.64□□□□□ -1.03
HDAC3-204ENST00000469207 PFDN2Q9UHV9 154 aa8.64□□□□□ -1.03
HDAC3-204ENST00000469207 TRAV8-2A0A0B4J237 113 aa8.63□□□□□ -1.03
HDAC3-204ENST00000469207 ZNF98A6NK75 572 aa8.63□□□□□ -1.03
HDAC3-204ENST00000469207 CTDSPLO15194 276 aa8.63□□□□□ -1.03
HDAC3-204ENST00000469207 DEFB130BP0DP73 79 aa8.63□□□□□ -1.03
HDAC3-204ENST00000469207 DEFB130AP0DP74 79 aa8.63□□□□□ -1.03
HDAC3-204ENST00000469207 ORM2P19652 201 aa8.63□□□□□ -1.03
HDAC3-204ENST00000469207 RNF182Q8N6D2 247 aa8.63□□□□□ -1.03
HDAC3-204ENST00000469207 IGF2BP2-AS1Q96M15 143 aa8.63□□□□□ -1.03
HDAC3-204ENST00000469207 TMEM208Q9BTX3 173 aa8.63□□□□□ -1.03
HDAC3-204ENST00000469207 SCP2D1Q9UJQ7 156 aa8.63□□□□□ -1.03
HDAC3-204ENST00000469207 APOBP04114 4563 aaKnown RBP8.62□□□□□ -1.03
HDAC3-204ENST00000469207 TRAV12-2A0A075B6T6 113 aa8.62□□□□□ -1.03
HDAC3-204ENST00000469207 WRBO00258 174 aa8.62□□□□□ -1.03
HDAC3-204ENST00000469207 NUP62P37198 522 aaPredicted RBP8.62□□□□□ -1.03
HDAC3-204ENST00000469207 CNN1P51911 297 aaKnown RBP8.62□□□□□ -1.03
HDAC3-204ENST00000469207 FGL1Q08830 312 aa8.62□□□□□ -1.03
HDAC3-204ENST00000469207 SPATA31B1PQ5VZV4 182 aa8.62□□□□□ -1.03
HDAC3-204ENST00000469207 THAP8Q8NA92 274 aa8.62□□□□□ -1.03
HDAC3-204ENST00000469207 OR11H7Q8NGC8 314 aa8.62□□□□□ -1.03
HDAC3-204ENST00000469207 CACFD1Q9UGQ2 172 aa8.62□□□□□ -1.03
HDAC3-204ENST00000469207 TEX48A0A1B0GUV7 120 aa8.61□□□□□ -1.03
HDAC3-204ENST00000469207 PLAC8L1A1L4L8 177 aa8.61□□□□□ -1.03
HDAC3-204ENST00000469207 A8MTW9 85 aa8.61□□□□□ -1.03
HDAC3-204ENST00000469207 PRSS46E5RG02 174 aa8.61□□□□□ -1.03
HDAC3-204ENST00000469207 NUDT3O95989 172 aa8.61□□□□□ -1.03
HDAC3-204ENST00000469207 ALDH3B2P48448 385 aa8.61□□□□□ -1.03
HDAC3-204ENST00000469207 ATP5IP56385 69 aaPredicted RBP8.61□□□□□ -1.03
HDAC3-204ENST00000469207 RAB11AP62491 216 aa8.61□□□□□ -1.03
HDAC3-204ENST00000469207 SOHLH1Q5JUK2 328 aa8.61□□□□□ -1.03
HDAC3-204ENST00000469207 TMED4Q7Z7H5 227 aa8.61□□□□□ -1.03
HDAC3-204ENST00000469207 BAP18Q8IXM2 172 aa8.61□□□□□ -1.03
HDAC3-204ENST00000469207 SCGB3A2Q96PL1 93 aa8.61□□□□□ -1.03
HDAC3-204ENST00000469207 SLC25A39Q9BZJ4 359 aaPredicted RBP8.61□□□□□ -1.03
HDAC3-204ENST00000469207 TMED3Q9Y3Q3 217 aa8.61□□□□□ -1.03
HDAC3-204ENST00000469207 DNAH5Q8TE73 4624 aa8.6□□□□□ -1.03
HDAC3-204ENST00000469207 F5H768 121 aa8.6□□□□□ -1.03
HDAC3-204ENST00000469207 FABP1P07148 127 aa8.6□□□□□ -1.03
HDAC3-204ENST00000469207 TNFSF8P32971 234 aa8.6□□□□□ -1.03
HDAC3-204ENST00000469207 GALR1P47211 349 aa8.6□□□□□ -1.03
HDAC3-204ENST00000469207 GPR141Q7Z602 305 aa8.6□□□□□ -1.03
HDAC3-204ENST00000469207 OR1B1Q8NGR6 318 aa8.6□□□□□ -1.03
HDAC3-204ENST00000469207 ZNRF2Q8NHG8 242 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms