RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 DYNLRB2Q8TF09 96 aa6.24□□□□□ -1.41
HDAC6-216ENST00000468949 TMEM190Q8WZ59 177 aa6.24□□□□□ -1.41
HDAC6-216ENST00000468949 GRAMD2BQ96HH9 432 aa6.24□□□□□ -1.41
HDAC6-216ENST00000468949 WFDC1Q9HC57 220 aa6.24□□□□□ -1.41
HDAC6-216ENST00000468949 DAZ1Q9NQZ3 744 aaKnown RBP6.24□□□□□ -1.41
HDAC6-216ENST00000468949 SLC39A9Q9NUM3 307 aa6.24□□□□□ -1.41
HDAC6-216ENST00000468949 HIGD1AQ9Y241 93 aa6.24□□□□□ -1.41
HDAC6-216ENST00000468949 LSM4Q9Y4Z0 139 aaKnown RBP6.24□□□□□ -1.41
HDAC6-216ENST00000468949 TIMM9Q9Y5J7 89 aa6.24□□□□□ -1.41
HDAC6-216ENST00000468949 A0A1W2PS18 150 aa6.23□□□□□ -1.41
HDAC6-216ENST00000468949 LGALS9O00182 355 aa6.23□□□□□ -1.41
HDAC6-216ENST00000468949 WIPF1O43516 503 aa6.23□□□□□ -1.41
HDAC6-216ENST00000468949 ZNF207O43670 478 aaKnown RBP6.23□□□□□ -1.41
HDAC6-216ENST00000468949 HYPMO75409 117 aa6.23□□□□□ -1.41
HDAC6-216ENST00000468949 NPPCP23582 126 aa6.23□□□□□ -1.41
HDAC6-216ENST00000468949 GATA2P23769 480 aaPredicted RBP6.23□□□□□ -1.41
HDAC6-216ENST00000468949 FHL3Q13643 280 aa6.23□□□□□ -1.41
HDAC6-216ENST00000468949 C10orf113Q5VZT2 155 aa6.23□□□□□ -1.41
HDAC6-216ENST00000468949 TOMM20LQ6UXN7 152 aa6.23□□□□□ -1.41
HDAC6-216ENST00000468949 TMEM182Q6ZP80 229 aaPredicted RBP6.23□□□□□ -1.41
HDAC6-216ENST00000468949 REC114Q7Z4M0 266 aa6.23□□□□□ -1.41
HDAC6-216ENST00000468949 BAP18Q8IXM2 172 aa6.23□□□□□ -1.41
HDAC6-216ENST00000468949 OR9G4Q8NGQ1 327 aa6.23□□□□□ -1.41
HDAC6-216ENST00000468949 STOML3Q8TAV4 291 aa6.23□□□□□ -1.41
HDAC6-216ENST00000468949 RCC1LQ96I51 464 aaKnown RBP6.23□□□□□ -1.41
HDAC6-216ENST00000468949 PSMG3Q9BT73 122 aaPredicted RBP6.23□□□□□ -1.41
HDAC6-216ENST00000468949 SLC25A32Q9H2D1 315 aa6.23□□□□□ -1.41
HDAC6-216ENST00000468949 SLC45A2Q9UMX9 530 aa6.23□□□□□ -1.41
HDAC6-216ENST00000468949 NBEAL1Q6ZS30 2694 aa6.22□□□□□ -1.41
HDAC6-216ENST00000468949 A0A1W2PPV4 95 aa6.22□□□□□ -1.41
HDAC6-216ENST00000468949 A8MWP6 167 aa6.22□□□□□ -1.41
HDAC6-216ENST00000468949 SAP30O75446 220 aa6.22□□□□□ -1.41
HDAC6-216ENST00000468949 TAS2R45P59539 299 aa6.22□□□□□ -1.41
HDAC6-216ENST00000468949 SERF2P84101 59 aa6.22□□□□□ -1.41
HDAC6-216ENST00000468949 KLF5Q13887 457 aaPredicted RBP6.22□□□□□ -1.41
HDAC6-216ENST00000468949 UNQ9165/PRO28630Q6UXU0 137 aa6.22□□□□□ -1.41
HDAC6-216ENST00000468949 ST8SIA2Q92186 375 aa6.22□□□□□ -1.41
HDAC6-216ENST00000468949 DLX4Q92988 240 aaPredicted RBP6.22□□□□□ -1.41
HDAC6-216ENST00000468949 MARC2Q969Z3 335 aa6.22□□□□□ -1.41
HDAC6-216ENST00000468949 RNF2Q99496 336 aa6.22□□□□□ -1.41
HDAC6-216ENST00000468949 MCRIP2Q9BUT9 160 aaKnown RBP6.22□□□□□ -1.41
HDAC6-216ENST00000468949 SH3BGRL3Q9H299 93 aa6.22□□□□□ -1.41
HDAC6-216ENST00000468949 ARV1Q9H2C2 271 aa6.22□□□□□ -1.41
HDAC6-216ENST00000468949 SLC25A22Q9H936 323 aa6.22□□□□□ -1.41
HDAC6-216ENST00000468949 WI2-2373I1.2A0A1W2PRP0 233 aa6.21□□□□□ -1.42
HDAC6-216ENST00000468949 UMAD1C9J7I0 102 aa6.21□□□□□ -1.42
HDAC6-216ENST00000468949 K7EMT4 169 aa6.21□□□□□ -1.42
HDAC6-216ENST00000468949 SEC11BP0C7V7 166 aa6.21□□□□□ -1.42
HDAC6-216ENST00000468949 SPP1P10451 314 aa6.21□□□□□ -1.42
HDAC6-216ENST00000468949 M6PRP20645 277 aa6.21□□□□□ -1.42
HDAC6-216ENST00000468949 LORP23490 312 aaPredicted RBP6.21□□□□□ -1.42
HDAC6-216ENST00000468949 RHOBP62745 196 aa6.21□□□□□ -1.42
HDAC6-216ENST00000468949 RPL11P62913 178 aaKnown RBP6.21□□□□□ -1.42
HDAC6-216ENST00000468949 USF2Q15853 346 aaPredicted RBP6.21□□□□□ -1.42
HDAC6-216ENST00000468949 TMEM41BQ5BJD5 291 aa6.21□□□□□ -1.42
HDAC6-216ENST00000468949 LAMTOR1Q6IAA8 161 aa6.21□□□□□ -1.42
HDAC6-216ENST00000468949 FAM122CQ6P4D5 195 aa6.21□□□□□ -1.42
HDAC6-216ENST00000468949 LINC00305Q7Z4B0 112 aa6.21□□□□□ -1.42
HDAC6-216ENST00000468949 IQCF2Q8IXL9 164 aa6.21□□□□□ -1.42
HDAC6-216ENST00000468949 OR10G4Q8NGN3 311 aa6.21□□□□□ -1.42
HDAC6-216ENST00000468949 OR10G9Q8NGN4 311 aa6.21□□□□□ -1.42
HDAC6-216ENST00000468949 OR10G7Q8NGN6 311 aa6.21□□□□□ -1.42
HDAC6-216ENST00000468949 GATAD1Q8WUU5 269 aa6.21□□□□□ -1.42
HDAC6-216ENST00000468949 TMED6Q8WW62 240 aa6.21□□□□□ -1.42
HDAC6-216ENST00000468949 PHYHIPLQ96FC7 376 aa6.21□□□□□ -1.42
HDAC6-216ENST00000468949 MRPL32Q9BYC8 188 aaKnown RBP6.21□□□□□ -1.42
HDAC6-216ENST00000468949 GPR61Q9BZJ8 451 aa6.21□□□□□ -1.42
HDAC6-216ENST00000468949 DNAJC4Q9NNZ3 241 aa6.21□□□□□ -1.42
HDAC6-216ENST00000468949 CYTL1Q9NRR1 136 aa6.21□□□□□ -1.42
HDAC6-216ENST00000468949 IGHV3-49A0A0A0MS15 119 aa6.2□□□□□ -1.42
HDAC6-216ENST00000468949 IGHV3-66A0A0C4DH42 116 aa6.2□□□□□ -1.42
HDAC6-216ENST00000468949 IGHV7-4-1A0A0J9YVY3 117 aa6.2□□□□□ -1.42
HDAC6-216ENST00000468949 C2orf70A6NJV1 201 aa6.2□□□□□ -1.42
HDAC6-216ENST00000468949 SEC14L6B5MCN3 397 aa6.2□□□□□ -1.42
HDAC6-216ENST00000468949 TEX46H3BTG2 121 aa6.2□□□□□ -1.42
HDAC6-216ENST00000468949 ATF4P18848 351 aaPredicted RBP6.2□□□□□ -1.42
HDAC6-216ENST00000468949 GALR1P47211 349 aa6.2□□□□□ -1.42
HDAC6-216ENST00000468949 CDC34P49427 236 aaPredicted RBP6.2□□□□□ -1.42
HDAC6-216ENST00000468949 RAB5CP51148 216 aa6.2□□□□□ -1.42
HDAC6-216ENST00000468949 PLP1P60201 277 aa6.2□□□□□ -1.42
HDAC6-216ENST00000468949 RAB2AP61019 212 aa6.2□□□□□ -1.42
HDAC6-216ENST00000468949 TM4SF20Q53R12 229 aa6.2□□□□□ -1.42
HDAC6-216ENST00000468949 KHDC3LQ587J8 217 aa6.2□□□□□ -1.42
HDAC6-216ENST00000468949 FAM78BQ5VT40 261 aa6.2□□□□□ -1.42
HDAC6-216ENST00000468949 OR8I2Q8N0Y5 310 aa6.2□□□□□ -1.42
HDAC6-216ENST00000468949 LINC00482Q8N8I6 264 aa6.2□□□□□ -1.42
HDAC6-216ENST00000468949 FAM213BQ8TBF2 198 aa6.2□□□□□ -1.42
HDAC6-216ENST00000468949 GPR82Q96P67 336 aa6.2□□□□□ -1.42
HDAC6-216ENST00000468949 UHRF2Q96PU4 802 aa6.2□□□□□ -1.42
HDAC6-216ENST00000468949 SLC25A39Q9BZJ4 359 aaPredicted RBP6.2□□□□□ -1.42
HDAC6-216ENST00000468949 ACTR3CQ9C0K3 210 aaPredicted RBP6.2□□□□□ -1.42
HDAC6-216ENST00000468949 MRPL27Q9P0M9 148 aaKnown RBP6.2□□□□□ -1.42
HDAC6-216ENST00000468949 IGHV3OR16-13A0A075B7E8 117 aa6.19□□□□□ -1.42
HDAC6-216ENST00000468949 IGHV3-74A0A0B4J1X5 117 aa6.19□□□□□ -1.42
HDAC6-216ENST00000468949 TMEM213A2RRL7 107 aa6.19□□□□□ -1.42
HDAC6-216ENST00000468949 HELTA6NFD8 242 aa6.19□□□□□ -1.42
HDAC6-216ENST00000468949 FAM229AH3BQW9 127 aa6.19□□□□□ -1.42
HDAC6-216ENST00000468949 H3BRN7 92 aa6.19□□□□□ -1.42
HDAC6-216ENST00000468949 OR7C2O60412 319 aa6.19□□□□□ -1.42
HDAC6-216ENST00000468949 IFNA7P01567 189 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms