RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 TMEM231Q9H6L2 316 aa13.46□□□□□ -0.25
RPL39-202ENST00000468844 UMAD1C9J7I0 102 aa13.45□□□□□ -0.26
RPL39-202ENST00000468844 AWAT1Q58HT5 328 aa13.45□□□□□ -0.26
RPL39-202ENST00000468844 RPP25LQ8N5L8 163 aaKnown RBP13.45□□□□□ -0.26
RPL39-202ENST00000468844 Q8WTZ3 238 aa13.45□□□□□ -0.26
RPL39-202ENST00000468844 RNF125Q96EQ8 232 aa13.45□□□□□ -0.26
RPL39-202ENST00000468844 RCC1LQ96I51 464 aaKnown RBP13.45□□□□□ -0.26
RPL39-202ENST00000468844 ZFAND3Q9H8U3 227 aa13.45□□□□□ -0.26
RPL39-202ENST00000468844 DOK5Q9P104 306 aa13.45□□□□□ -0.26
RPL39-202ENST00000468844 TSSC4Q9Y5U2 329 aaPredicted RBP13.45□□□□□ -0.26
RPL39-202ENST00000468844 IGHV4OR15-8A0A075B7B6 117 aa13.45□□□□□ -0.26
RPL39-202ENST00000468844 A0A087WW49 117 aa13.45□□□□□ -0.26
RPL39-202ENST00000468844 H2AFB1P0C5Y9 115 aa13.45□□□□□ -0.26
RPL39-202ENST00000468844 PLP1P60201 277 aa13.45□□□□□ -0.26
RPL39-202ENST00000468844 LYZP61626 148 aa13.45□□□□□ -0.26
RPL39-202ENST00000468844 RELQ04864 619 aaPredicted RBP13.45□□□□□ -0.26
RPL39-202ENST00000468844 USF2Q15853 346 aaPredicted RBP13.45□□□□□ -0.26
RPL39-202ENST00000468844 TMEM41BQ5BJD5 291 aa13.45□□□□□ -0.26
RPL39-202ENST00000468844 TOMM20LQ6UXN7 152 aa13.45□□□□□ -0.26
RPL39-202ENST00000468844 PATE2Q6UY27 113 aa13.45□□□□□ -0.26
RPL39-202ENST00000468844 IGHV3OR16-8A0A075B7F1 116 aa13.44□□□□□ -0.26
RPL39-202ENST00000468844 WI2-2373I1.2A0A1W2PRP0 233 aa13.44□□□□□ -0.26
RPL39-202ENST00000468844 GGCTO75223 188 aaKnown RBP13.44□□□□□ -0.26
RPL39-202ENST00000468844 MBP02144 154 aa13.44□□□□□ -0.26
RPL39-202ENST00000468844 ORM2P19652 201 aa13.44□□□□□ -0.26
RPL39-202ENST00000468844 ACOT6Q3I5F7 207 aaPredicted RBP13.44□□□□□ -0.26
RPL39-202ENST00000468844 C8orf86Q6ZUL3 223 aa13.44□□□□□ -0.26
RPL39-202ENST00000468844 OR10G4Q8NGN3 311 aa13.44□□□□□ -0.26
RPL39-202ENST00000468844 OR10G9Q8NGN4 311 aa13.44□□□□□ -0.26
RPL39-202ENST00000468844 OR10G7Q8NGN6 311 aa13.44□□□□□ -0.26
RPL39-202ENST00000468844 OR1B1Q8NGR6 318 aa13.44□□□□□ -0.26
RPL39-202ENST00000468844 PBDC1Q9BVG4 233 aa13.44□□□□□ -0.26
RPL39-202ENST00000468844 A0A1W2PRX2 142 aa13.43□□□□□ -0.26
RPL39-202ENST00000468844 SNAPINO95295 136 aa13.43□□□□□ -0.26
RPL39-202ENST00000468844 OR11H1Q8NG94 326 aa13.43□□□□□ -0.26
RPL39-202ENST00000468844 LYPD6BQ8NI32 183 aa13.43□□□□□ -0.26
RPL39-202ENST00000468844 UHRF2Q96PU4 802 aa13.43□□□□□ -0.26
RPL39-202ENST00000468844 SEPSECSQ9HD40 501 aaKnown RBP13.43□□□□□ -0.26
RPL39-202ENST00000468844 CMYA5Q8N3K9 4069 aa13.43□□□□□ -0.26
RPL39-202ENST00000468844 ADARB2-AS1A8MUL3 147 aa13.43□□□□□ -0.26
RPL39-202ENST00000468844 EIF3GO75821 320 aaKnown RBP eCLIP13.43□□□□□ -0.26
RPL39-202ENST00000468844 CD5P06127 495 aa13.43□□□□□ -0.26
RPL39-202ENST00000468844 RAB5CP51148 216 aa13.43□□□□□ -0.26
RPL39-202ENST00000468844 UNQ9165/PRO28630Q6UXU0 137 aa13.43□□□□□ -0.26
RPL39-202ENST00000468844 SSX7Q7RTT5 188 aa13.43□□□□□ -0.26
RPL39-202ENST00000468844 NDUFA4O00483 81 aa13.42□□□□□ -0.26
RPL39-202ENST00000468844 HSPB1P04792 205 aaKnown RBP13.42□□□□□ -0.26
RPL39-202ENST00000468844 ZNF726P1Q15940 193 aa13.42□□□□□ -0.26
RPL39-202ENST00000468844 FAM213BQ8TBF2 198 aa13.42□□□□□ -0.26
RPL39-202ENST00000468844 DUX3Q96PT4 197 aa13.42□□□□□ -0.26
RPL39-202ENST00000468844 PFDN5Q99471 154 aa13.42□□□□□ -0.26
RPL39-202ENST00000468844 C19orf24Q9BVV8 132 aa13.42□□□□□ -0.26
RPL39-202ENST00000468844 DNAJC4Q9NNZ3 241 aa13.42□□□□□ -0.26
RPL39-202ENST00000468844 COX7A2P2O60397 106 aa13.41□□□□□ -0.26
RPL39-202ENST00000468844 OR5G3P0C626 314 aa13.41□□□□□ -0.26
RPL39-202ENST00000468844 RPEL1Q2QD12 228 aa13.41□□□□□ -0.26
RPL39-202ENST00000468844 FAM78BQ5VT40 261 aa13.41□□□□□ -0.26
RPL39-202ENST00000468844 TMEM88Q6PEY1 159 aa13.41□□□□□ -0.26
RPL39-202ENST00000468844 OR1L4Q8NGR5 311 aa13.41□□□□□ -0.26
RPL39-202ENST00000468844 GATAD1Q8WUU5 269 aa13.41□□□□□ -0.26
RPL39-202ENST00000468844 SLC25A22Q9H936 323 aa13.41□□□□□ -0.26
RPL39-202ENST00000468844 MRPL27Q9P0M9 148 aaKnown RBP13.41□□□□□ -0.26
RPL39-202ENST00000468844 ELOA3CA0A087WX78 387 aaPredicted RBP13.41□□□□□ -0.26
RPL39-202ENST00000468844 HYPMO75409 117 aa13.41□□□□□ -0.26
RPL39-202ENST00000468844 HOXD3P31249 432 aaPredicted RBP13.41□□□□□ -0.26
RPL39-202ENST00000468844 MORN5Q5VZ52 161 aa13.41□□□□□ -0.26
RPL39-202ENST00000468844 C10orf113Q5VZT2 155 aa13.41□□□□□ -0.26
RPL39-202ENST00000468844 SPATA31B1PQ5VZV4 182 aa13.41□□□□□ -0.26
RPL39-202ENST00000468844 LINC00305Q7Z4B0 112 aa13.41□□□□□ -0.26
RPL39-202ENST00000468844 PRELID1Q9Y255 219 aa13.41□□□□□ -0.26
RPL39-202ENST00000468844 SEC14L6B5MCN3 397 aa13.4□□□□□ -0.26
RPL39-202ENST00000468844 CDC34P49427 236 aaPredicted RBP13.4□□□□□ -0.26
RPL39-202ENST00000468844 DPPA3Q6W0C5 159 aa13.4□□□□□ -0.26
RPL39-202ENST00000468844 GPHB5Q86YW7 130 aa13.4□□□□□ -0.26
RPL39-202ENST00000468844 TMEM190Q8WZ59 177 aa13.4□□□□□ -0.26
RPL39-202ENST00000468844 RAX2Q96IS3 184 aa13.4□□□□□ -0.26
RPL39-202ENST00000468844 PKD1L1Q8TDX9 2849 aa13.4□□□□□ -0.26
RPL39-202ENST00000468844 NOTCH3Q9UM47 2321 aa13.4□□□□□ -0.27
RPL39-202ENST00000468844 LINC01619G3V211 115 aa13.39□□□□□ -0.27
RPL39-202ENST00000468844 SFTA3P0C7M3 94 aa13.39□□□□□ -0.27
RPL39-202ENST00000468844 FHL3Q13643 280 aa13.39□□□□□ -0.27
RPL39-202ENST00000468844 CBLN2Q8IUK8 224 aa13.39□□□□□ -0.27
RPL39-202ENST00000468844 OR1N2Q8NGR9 330 aa13.39□□□□□ -0.27
RPL39-202ENST00000468844 CITED1Q99966 193 aa13.39□□□□□ -0.27
RPL39-202ENST00000468844 C20orf24Q9BUV8 137 aa13.39□□□□□ -0.27
RPL39-202ENST00000468844 HIGD1AQ9Y241 93 aa13.39□□□□□ -0.27
RPL39-202ENST00000468844 HMGB3O15347 200 aaKnown RBP13.39□□□□□ -0.27
RPL39-202ENST00000468844 SLURP1P55000 103 aa13.39□□□□□ -0.27
RPL39-202ENST00000468844 RHOBP62745 196 aa13.39□□□□□ -0.27
RPL39-202ENST00000468844 FLI1Q01543 452 aaPredicted RBP13.39□□□□□ -0.27
RPL39-202ENST00000468844 NSUN5P1Q3KNT7 163 aa13.39□□□□□ -0.27
RPL39-202ENST00000468844 MIR17HGQ75NE6 70 aa13.39□□□□□ -0.27
RPL39-202ENST00000468844 RAB24Q969Q5 203 aa13.39□□□□□ -0.27
RPL39-202ENST00000468844 SLC25A39Q9BZJ4 359 aaPredicted RBP13.39□□□□□ -0.27
RPL39-202ENST00000468844 FUT9Q9Y231 359 aa13.39□□□□□ -0.27
RPL39-202ENST00000468844 CTXND1A0A1B0GTU2 59 aa13.38□□□□□ -0.27
RPL39-202ENST00000468844 A0A1W2PPV4 95 aa13.38□□□□□ -0.27
RPL39-202ENST00000468844 C9JQL5 133 aa13.38□□□□□ -0.27
RPL39-202ENST00000468844 ZNF207O43670 478 aaKnown RBP13.38□□□□□ -0.27
RPL39-202ENST00000468844 ACTR3CQ9C0K3 210 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms