RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 RFNGQ9Y644 331 aa15.06■□□□□ 0
COL9A3-207ENST00000467819 FABP12A6NFH5 140 aa15.05■□□□□ -0
COL9A3-207ENST00000467819 SMIM9A6NGZ8 99 aa15.05■□□□□ -0
COL9A3-207ENST00000467819 SNRPGP15A8MWD9 76 aa15.05■□□□□ -0
COL9A3-207ENST00000467819 F6UB75 175 aa15.05■□□□□ -0
COL9A3-207ENST00000467819 TNFSF8P32971 234 aa15.05■□□□□ -0
COL9A3-207ENST00000467819 TMBIM6P55061 237 aa15.05■□□□□ -0
COL9A3-207ENST00000467819 RAB11AP62491 216 aa15.05■□□□□ -0
COL9A3-207ENST00000467819 TRGV9Q99603 122 aa15.05■□□□□ -0
COL9A3-207ENST00000467819 PITX3O75364 302 aa15.04■□□□□ -0
COL9A3-207ENST00000467819 ZNF79Q15937 498 aa15.04■□□□□ -0
COL9A3-207ENST00000467819 FAM78BQ5VT40 261 aa15.04■□□□□ -0
COL9A3-207ENST00000467819 EBLN2Q6P2I7 272 aa15.04■□□□□ -0
COL9A3-207ENST00000467819 SOSTQ9BQB4 213 aa15.04■□□□□ -0
COL9A3-207ENST00000467819 BCL7BQ9BQE9 202 aa15.04■□□□□ -0
COL9A3-207ENST00000467819 SLIRPQ9GZT3 109 aaKnown RBP15.04■□□□□ -0
COL9A3-207ENST00000467819 IGKV1OR2-108A0A075B7D4 117 aa15.03■□□□□ -0
COL9A3-207ENST00000467819 DUXBA0A1W2PPF3 345 aa15.03■□□□□ -0
COL9A3-207ENST00000467819 ISLRO14498 428 aa15.03■□□□□ -0
COL9A3-207ENST00000467819 VAMP1P23763 118 aa15.03■□□□□ -0
COL9A3-207ENST00000467819 FAUP35544 74 aaKnown RBP15.03■□□□□ -0
COL9A3-207ENST00000467819 PSG9Q00887 426 aa15.03■□□□□ -0
COL9A3-207ENST00000467819 FAM222AQ5U5X8 452 aa15.03■□□□□ -0
COL9A3-207ENST00000467819 CLUHP3Q96NS8 147 aa15.03■□□□□ -0
COL9A3-207ENST00000467819 C7orf50Q9BRJ6 194 aaKnown RBP15.03■□□□□ -0
COL9A3-207ENST00000467819 PLA2G2EQ9NZK7 142 aa15.03■□□□□ -0
COL9A3-207ENST00000467819 DKK2Q9UBU2 259 aa15.03■□□□□ -0
COL9A3-207ENST00000467819 GOLT1BQ9Y3E0 138 aa15.03■□□□□ -0
COL9A3-207ENST00000467819 PIGBOS1A0A0B4J2F0 54 aa15.02■□□□□ -0
COL9A3-207ENST00000467819 NOL3O60936 208 aaKnown RBP15.02■□□□□ -0
COL9A3-207ENST00000467819 TMEM128Q5BJH2 165 aa15.02■□□□□ -0
COL9A3-207ENST00000467819 SPATA31B1PQ5VZV4 182 aa15.02■□□□□ -0
COL9A3-207ENST00000467819 UBE2DNLQ8IWF7 75 aa15.02■□□□□ -0
COL9A3-207ENST00000467819 THAP8Q8NA92 274 aa15.02■□□□□ -0
COL9A3-207ENST00000467819 MCFD2Q8NI22 146 aa15.02■□□□□ -0
COL9A3-207ENST00000467819 C16orf92Q96LL3 132 aa15.02■□□□□ -0
COL9A3-207ENST00000467819 NIPSNAP3BQ9BS92 247 aa15.02■□□□□ -0
COL9A3-207ENST00000467819 SLC25A22Q9H936 323 aa15.02■□□□□ -0
COL9A3-207ENST00000467819 A0A0J9YX75 114 aa15.01□□□□□ -0.01
COL9A3-207ENST00000467819 TEX48A0A1B0GUV7 120 aa15.01□□□□□ -0.01
COL9A3-207ENST00000467819 A0A1B0GVY2 172 aa15.01□□□□□ -0.01
COL9A3-207ENST00000467819 H3BMQ9 156 aa15.01□□□□□ -0.01
COL9A3-207ENST00000467819 HTN3P15516 51 aa15.01□□□□□ -0.01
COL9A3-207ENST00000467819 PAX9P55771 341 aa15.01□□□□□ -0.01
COL9A3-207ENST00000467819 C1orf158Q8N1D5 194 aa15.01□□□□□ -0.01
COL9A3-207ENST00000467819 C20orf173Q96LM9 149 aa15.01□□□□□ -0.01
COL9A3-207ENST00000467819 MAGT1Q9H0U3 335 aa15.01□□□□□ -0.01
COL9A3-207ENST00000467819 SLC25A32Q9H2D1 315 aa15.01□□□□□ -0.01
COL9A3-207ENST00000467819 RPRMQ9NS64 109 aa15.01□□□□□ -0.01
COL9A3-207ENST00000467819 NACAE9PAV3 2078 aa15.01□□□□□ -0.01
COL9A3-207ENST00000467819 PKD1P98161 4303 aa15□□□□□ -0.01
COL9A3-207ENST00000467819 LOC102723971A0A1B0GUV8 181 aa15□□□□□ -0.01
COL9A3-207ENST00000467819 PRSS29PA6NIE9 313 aa15□□□□□ -0.01
COL9A3-207ENST00000467819 RTL8CO15255 209 aa15□□□□□ -0.01
COL9A3-207ENST00000467819 MED6O75586 246 aa15□□□□□ -0.01
COL9A3-207ENST00000467819 HBE1P02100 147 aa15□□□□□ -0.01
COL9A3-207ENST00000467819 GALR1P47211 349 aa15□□□□□ -0.01
COL9A3-207ENST00000467819 MEOX2P50222 304 aa15□□□□□ -0.01
COL9A3-207ENST00000467819 PYDC2Q56P42 97 aa15□□□□□ -0.01
COL9A3-207ENST00000467819 TOMM5Q8N4H5 51 aa15□□□□□ -0.01
COL9A3-207ENST00000467819 TRIM63Q969Q1 353 aa15□□□□□ -0.01
COL9A3-207ENST00000467819 IGLV2-18A0A075B6J9 118 aa14.99□□□□□ -0.01
COL9A3-207ENST00000467819 WRBO00258 174 aa14.99□□□□□ -0.01
COL9A3-207ENST00000467819 IFNA21P01568 189 aa14.99□□□□□ -0.01
COL9A3-207ENST00000467819 SLC25A6P12236 298 aa14.99□□□□□ -0.01
COL9A3-207ENST00000467819 AP3S2P59780 193 aa14.99□□□□□ -0.01
COL9A3-207ENST00000467819 SAMD13Q5VXD3 122 aa14.99□□□□□ -0.01
COL9A3-207ENST00000467819 GGNBP1Q5YKI7 109 aa14.99□□□□□ -0.01
COL9A3-207ENST00000467819 LRTM2Q8N967 370 aa14.99□□□□□ -0.01
COL9A3-207ENST00000467819 CIB3Q96Q77 187 aaPredicted RBP14.99□□□□□ -0.01
COL9A3-207ENST00000467819 RSG1Q9BU20 258 aa14.99□□□□□ -0.01
COL9A3-207ENST00000467819 DOK5Q9P104 306 aa14.99□□□□□ -0.01
COL9A3-207ENST00000467819 YTHDF2Q9Y5A9 579 aaKnown RBP14.99□□□□□ -0.01
COL9A3-207ENST00000467819 DNAH11Q96DT5 4516 aa14.99□□□□□ -0.01
COL9A3-207ENST00000467819 DYNC1H1Q14204 4646 aaKnown RBP14.99□□□□□ -0.01
COL9A3-207ENST00000467819 PCLOQ9Y6V0 5065 aa14.98□□□□□ -0.01
COL9A3-207ENST00000467819 ZNF98A6NK75 572 aa14.98□□□□□ -0.01
COL9A3-207ENST00000467819 SYNGR2O43760 224 aa14.98□□□□□ -0.01
COL9A3-207ENST00000467819 CFDP00746 253 aaPredicted RBP14.98□□□□□ -0.01
COL9A3-207ENST00000467819 GATA2P23769 480 aaPredicted RBP14.98□□□□□ -0.01
COL9A3-207ENST00000467819 RRN3P1Q2M238 152 aa14.98□□□□□ -0.01
COL9A3-207ENST00000467819 FAM210BQ96KR6 192 aa14.98□□□□□ -0.01
COL9A3-207ENST00000467819 PRSS46E5RG02 174 aa14.97□□□□□ -0.01
COL9A3-207ENST00000467819 H3BP45 60 aa14.97□□□□□ -0.01
COL9A3-207ENST00000467819 HOXB5P09067 269 aa14.97□□□□□ -0.01
COL9A3-207ENST00000467819 ORM2P19652 201 aa14.97□□□□□ -0.01
COL9A3-207ENST00000467819 RPP30P78346 268 aaKnown RBP14.97□□□□□ -0.01
COL9A3-207ENST00000467819 LGALS9BQ3B8N2 356 aa14.97□□□□□ -0.01
COL9A3-207ENST00000467819 SPANXN5Q5MJ07 72 aa14.97□□□□□ -0.01
COL9A3-207ENST00000467819 BPIFCQ8NFQ6 507 aa14.97□□□□□ -0.01
COL9A3-207ENST00000467819 C17orf77Q96MU5 243 aa14.97□□□□□ -0.01
COL9A3-207ENST00000467819 TMEM208Q9BTX3 173 aa14.97□□□□□ -0.01
COL9A3-207ENST00000467819 TMED3Q9Y3Q3 217 aa14.97□□□□□ -0.01
COL9A3-207ENST00000467819 SFT2D2O95562 160 aa14.96□□□□□ -0.01
COL9A3-207ENST00000467819 AKR1C1Q04828 323 aa14.96□□□□□ -0.01
COL9A3-207ENST00000467819 PPP1R1AQ13522 171 aa14.96□□□□□ -0.01
COL9A3-207ENST00000467819 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.96□□□□□ -0.01
COL9A3-207ENST00000467819 TMEM182Q6ZP80 229 aaPredicted RBP14.96□□□□□ -0.01
COL9A3-207ENST00000467819 OR1B1Q8NGR6 318 aa14.96□□□□□ -0.01
COL9A3-207ENST00000467819 SLC45A2Q9UMX9 530 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms