RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 FKBP1CQ5VVH2 108 aa1.68□□□□□ -2.14
SMC4-208ENST00000467468 EIF5AL1Q6IS14 154 aaKnown RBP1.68□□□□□ -2.14
SMC4-208ENST00000467468 RPS19BP1Q86WX3 136 aaKnown RBP1.68□□□□□ -2.14
SMC4-208ENST00000467468 LINC00311Q8N616 119 aa1.68□□□□□ -2.14
SMC4-208ENST00000467468 PPTC7Q8NI37 304 aa1.68□□□□□ -2.14
SMC4-208ENST00000467468 ZNF418Q8TF45 676 aaPredicted RBP1.68□□□□□ -2.14
SMC4-208ENST00000467468 SLC25A21Q9BQT8 299 aaPredicted RBP1.68□□□□□ -2.14
SMC4-208ENST00000467468 NDUFAF1Q9Y375 327 aa1.68□□□□□ -2.14
SMC4-208ENST00000467468 ICE1Q9Y2F5 2266 aa1.68□□□□□ -2.14
SMC4-208ENST00000467468 TRBV6-5A0A0K0K1A5 114 aa1.67□□□□□ -2.14
SMC4-208ENST00000467468 E7EQ34 232 aa1.67□□□□□ -2.14
SMC4-208ENST00000467468 H3BQV1 296 aa1.67□□□□□ -2.14
SMC4-208ENST00000467468 PROSCO94903 275 aa1.67□□□□□ -2.14
SMC4-208ENST00000467468 GADD45GO95257 159 aa1.67□□□□□ -2.14
SMC4-208ENST00000467468 PLCXD2Q0VAA5 305 aa1.67□□□□□ -2.14
SMC4-208ENST00000467468 PDE6HQ13956 83 aa1.67□□□□□ -2.14
SMC4-208ENST00000467468 RTL8BQ17RB0 113 aa1.67□□□□□ -2.14
SMC4-208ENST00000467468 Q8IYB0 196 aa1.67□□□□□ -2.14
SMC4-208ENST00000467468 TEX47Q8TBZ9 253 aa1.67□□□□□ -2.14
SMC4-208ENST00000467468 CARD19Q96LW7 228 aa1.67□□□□□ -2.14
SMC4-208ENST00000467468 CCDC32Q9BV29 185 aa1.67□□□□□ -2.14
SMC4-208ENST00000467468 C14orf132Q9NPU4 83 aa1.67□□□□□ -2.14
SMC4-208ENST00000467468 NUBP2Q9Y5Y2 271 aa1.67□□□□□ -2.14
SMC4-208ENST00000467468 ANKRD30AQ9BXX3 1397 aa1.67□□□□□ -2.14
SMC4-208ENST00000467468 FBN1P35555 2871 aaKnown RBP1.67□□□□□ -2.14
SMC4-208ENST00000467468 MDC1Q14676 2089 aaKnown RBP1.67□□□□□ -2.14
SMC4-208ENST00000467468 CD109Q6YHK3 1445 aa1.66□□□□□ -2.14
SMC4-208ENST00000467468 ZCCHC11Q5TAX3 1644 aaKnown RBP1.66□□□□□ -2.14
SMC4-208ENST00000467468 TRAV14DV4A0A0A6YYC5 116 aa1.66□□□□□ -2.14
SMC4-208ENST00000467468 TRAV12-1A0A0B4J245 112 aa1.66□□□□□ -2.14
SMC4-208ENST00000467468 TRAV5A0A0B4J249 113 aa1.66□□□□□ -2.14
SMC4-208ENST00000467468 C2orf70A6NJV1 201 aa1.66□□□□□ -2.14
SMC4-208ENST00000467468 LYZL6O75951 148 aa1.66□□□□□ -2.14
SMC4-208ENST00000467468 CXCL1P09341 107 aa1.66□□□□□ -2.14
SMC4-208ENST00000467468 NBEAP1P0C6P0 100 aa1.66□□□□□ -2.14
SMC4-208ENST00000467468 TMBIM6P55061 237 aa1.66□□□□□ -2.14
SMC4-208ENST00000467468 TOMM20LQ6UXN7 152 aa1.66□□□□□ -2.14
SMC4-208ENST00000467468 PATE2Q6UY27 113 aa1.66□□□□□ -2.14
SMC4-208ENST00000467468 IFT20Q8IY31 132 aa1.66□□□□□ -2.14
SMC4-208ENST00000467468 LINC00301Q8NCQ3 95 aa1.66□□□□□ -2.14
SMC4-208ENST00000467468 RMND5BQ96G75 393 aaPredicted RBP1.66□□□□□ -2.14
SMC4-208ENST00000467468 ADAT1Q9BUB4 502 aaKnown RBP1.66□□□□□ -2.14
SMC4-208ENST00000467468 OR5AC2Q9NZP5 309 aa1.66□□□□□ -2.14
SMC4-208ENST00000467468 CAMSAP2Q08AD1 1489 aa1.66□□□□□ -2.14
SMC4-208ENST00000467468 OBSL1O75147 1896 aa1.66□□□□□ -2.14
SMC4-208ENST00000467468 SBF1O95248 1867 aa1.66□□□□□ -2.14
SMC4-208ENST00000467468 GBF1Q92538 1859 aa1.66□□□□□ -2.14
SMC4-208ENST00000467468 CUL9Q8IWT3 2517 aa1.66□□□□□ -2.14
SMC4-208ENST00000467468 COL5A3P25940 1745 aaPredicted RBP1.66□□□□□ -2.14
SMC4-208ENST00000467468 UBR2Q8IWV8 1755 aa1.65□□□□□ -2.14
SMC4-208ENST00000467468 CEP164Q9UPV0 1460 aa1.65□□□□□ -2.15
SMC4-208ENST00000467468 PRORSD1PA6NEY8 169 aa1.65□□□□□ -2.15
SMC4-208ENST00000467468 J3QKU1 62 aa1.65□□□□□ -2.15
SMC4-208ENST00000467468 OR1I1O60431 355 aa1.65□□□□□ -2.15
SMC4-208ENST00000467468 ARPP19P56211 112 aa1.65□□□□□ -2.15
SMC4-208ENST00000467468 TMEM128Q5BJH2 165 aa1.65□□□□□ -2.15
SMC4-208ENST00000467468 C10orf55Q5SWW7 151 aa1.65□□□□□ -2.15
SMC4-208ENST00000467468 PHF5AQ7RTV0 110 aaKnown RBP1.65□□□□□ -2.15
SMC4-208ENST00000467468 PRR15Q8IV56 129 aa1.65□□□□□ -2.15
SMC4-208ENST00000467468 SFT2D1Q8WV19 159 aa1.65□□□□□ -2.15
SMC4-208ENST00000467468 ISOC1Q96CN7 298 aa1.65□□□□□ -2.15
SMC4-208ENST00000467468 C6orf62Q9GZU0 229 aaPredicted RBP1.65□□□□□ -2.15
SMC4-208ENST00000467468 MYH7BA7E2Y1 1941 aa1.64□□□□□ -2.15
SMC4-208ENST00000467468 MYH2Q9UKX2 1941 aa1.64□□□□□ -2.15
SMC4-208ENST00000467468 BAHCC1Q9P281 2608 aa1.64□□□□□ -2.15
SMC4-208ENST00000467468 ODAMA1E959 279 aa1.64□□□□□ -2.15
SMC4-208ENST00000467468 TSTD3H0UI37 97 aa1.64□□□□□ -2.15
SMC4-208ENST00000467468 BRS3P32247 399 aa1.64□□□□□ -2.15
SMC4-208ENST00000467468 MSMO1Q15800 293 aa1.64□□□□□ -2.15
SMC4-208ENST00000467468 DEFB113Q30KQ7 82 aa1.64□□□□□ -2.15
SMC4-208ENST00000467468 CROCCP2Q86T23 111 aa1.64□□□□□ -2.15
SMC4-208ENST00000467468 ZNF563Q8TA94 476 aa1.64□□□□□ -2.15
SMC4-208ENST00000467468 GRPEL2Q8TAA5 225 aa1.64□□□□□ -2.15
SMC4-208ENST00000467468 BORCS8Q96FH0 119 aa1.64□□□□□ -2.15
SMC4-208ENST00000467468 EFCAB11Q9BUY7 163 aa1.64□□□□□ -2.15
SMC4-208ENST00000467468 LRTM1Q9HBL6 345 aa1.64□□□□□ -2.15
SMC4-208ENST00000467468 OTORQ9NRC9 128 aa1.64□□□□□ -2.15
SMC4-208ENST00000467468 RNF11Q9Y3C5 154 aa1.64□□□□□ -2.15
SMC4-208ENST00000467468 ASB4Q9Y574 426 aa1.64□□□□□ -2.15
SMC4-208ENST00000467468 SOX21Q9Y651 276 aaPredicted RBP1.64□□□□□ -2.15
SMC4-208ENST00000467468 NUMA1Q14980 2115 aa1.64□□□□□ -2.15
SMC4-208ENST00000467468 COL4A5P29400 1685 aa1.64□□□□□ -2.15
SMC4-208ENST00000467468 MYH3P11055 1940 aa1.64□□□□□ -2.15
SMC4-208ENST00000467468 OTOGLQ3ZCN5 2332 aa1.63□□□□□ -2.15
SMC4-208ENST00000467468 NCAPD3P42695 1498 aa1.63□□□□□ -2.15
SMC4-208ENST00000467468 CACNA1GO43497 2377 aa1.63□□□□□ -2.15
SMC4-208ENST00000467468 TRDV1A0A1B0GX56 115 aa1.63□□□□□ -2.15
SMC4-208ENST00000467468 MRPS14O60783 128 aaKnown RBP1.63□□□□□ -2.15
SMC4-208ENST00000467468 CST7O76096 145 aa1.63□□□□□ -2.15
SMC4-208ENST00000467468 DHFRP00374 187 aa1.63□□□□□ -2.15
SMC4-208ENST00000467468 BCL2P10415 239 aa1.63□□□□□ -2.15
SMC4-208ENST00000467468 RNASE3P12724 160 aaKnown RBP1.63□□□□□ -2.15
SMC4-208ENST00000467468 S100GP29377 79 aa1.63□□□□□ -2.15
SMC4-208ENST00000467468 ROMO1P60602 79 aa1.63□□□□□ -2.15
SMC4-208ENST00000467468 KRTAP21-2Q3LI59 83 aa1.63□□□□□ -2.15
SMC4-208ENST00000467468 ANGPTL5Q86XS5 388 aa1.63□□□□□ -2.15
SMC4-208ENST00000467468 Q8N2B8 174 aa1.63□□□□□ -2.15
SMC4-208ENST00000467468 C12orf29Q8N999 325 aa1.63□□□□□ -2.15
SMC4-208ENST00000467468 OR2T35Q8NGX2 323 aa1.63□□□□□ -2.15
SMC4-208ENST00000467468 THEM6Q8WUY1 208 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms