RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 LTC4SQ16873 150 aa1.48□□□□□ -2.17
VPS13A-209ENST00000467124 Q6ZSA8 131 aa1.48□□□□□ -2.17
VPS13A-209ENST00000467124 FAM24BQ8N5W8 94 aa1.48□□□□□ -2.17
VPS13A-209ENST00000467124 YPEL2Q96QA6 119 aa1.48□□□□□ -2.17
VPS13A-209ENST00000467124 GPX7Q96SL4 187 aaPredicted RBP1.48□□□□□ -2.17
VPS13A-209ENST00000467124 GPER1Q99527 375 aa1.48□□□□□ -2.17
VPS13A-209ENST00000467124 PCBD2Q9H0N5 130 aa1.48□□□□□ -2.17
VPS13A-209ENST00000467124 MED11Q9P086 117 aa1.48□□□□□ -2.17
VPS13A-209ENST00000467124 ARFGEF3Q5TH69 2177 aa1.47□□□□□ -2.17
VPS13A-209ENST00000467124 INTS1Q8N201 2190 aaKnown RBP1.47□□□□□ -2.17
VPS13A-209ENST00000467124 ANAPC1Q9H1A4 1944 aa1.47□□□□□ -2.17
VPS13A-209ENST00000467124 TRAV12-1A0A0B4J245 112 aa1.47□□□□□ -2.17
VPS13A-209ENST00000467124 B4DSR2 109 aa1.47□□□□□ -2.17
VPS13A-209ENST00000467124 F8W036 122 aa1.47□□□□□ -2.17
VPS13A-209ENST00000467124 PGRMC1O00264 195 aaKnown RBP1.47□□□□□ -2.17
VPS13A-209ENST00000467124 EIF5AL1Q6IS14 154 aaKnown RBP1.47□□□□□ -2.17
VPS13A-209ENST00000467124 GRINAQ7Z429 371 aa1.47□□□□□ -2.17
VPS13A-209ENST00000467124 IFT20Q8IY31 132 aa1.47□□□□□ -2.17
VPS13A-209ENST00000467124 OR10K1Q8NGX5 313 aa1.47□□□□□ -2.17
VPS13A-209ENST00000467124 OR4K15Q8NH41 348 aa1.47□□□□□ -2.17
VPS13A-209ENST00000467124 PPTC7Q8NI37 304 aa1.47□□□□□ -2.17
VPS13A-209ENST00000467124 ZNF714Q96N38 554 aa1.47□□□□□ -2.17
VPS13A-209ENST00000467124 BIN3Q9NQY0 253 aa1.47□□□□□ -2.17
VPS13A-209ENST00000467124 IGKV3D-7A0A0C4DH55 119 aa1.46□□□□□ -2.18
VPS13A-209ENST00000467124 IGKV3OR2-268A0A0C4DH90 116 aa1.46□□□□□ -2.18
VPS13A-209ENST00000467124 CCDC160A6NGH7 325 aa1.46□□□□□ -2.18
VPS13A-209ENST00000467124 APOA2P02652 100 aa1.46□□□□□ -2.18
VPS13A-209ENST00000467124 LYNX1P0DP58 116 aa1.46□□□□□ -2.18
VPS13A-209ENST00000467124 IDO1P14902 403 aa1.46□□□□□ -2.18
VPS13A-209ENST00000467124 OGNP20774 298 aaKnown RBP1.46□□□□□ -2.18
VPS13A-209ENST00000467124 PDE6HQ13956 83 aa1.46□□□□□ -2.18
VPS13A-209ENST00000467124 SCGB2B2Q4G0G5 96 aa1.46□□□□□ -2.18
VPS13A-209ENST00000467124 CANT1Q8WVQ1 401 aa1.46□□□□□ -2.18
VPS13A-209ENST00000467124 HS3ST2Q9Y278 367 aa1.46□□□□□ -2.18
VPS13A-209ENST00000467124 DOCK4Q8N1I0 1966 aa1.46□□□□□ -2.18
VPS13A-209ENST00000467124 MYH7BA7E2Y1 1941 aa1.46□□□□□ -2.18
VPS13A-209ENST00000467124 ARHGEF28Q8N1W1 1705 aaKnown RBP1.46□□□□□ -2.18
VPS13A-209ENST00000467124 HCRTO43612 131 aa1.45□□□□□ -2.18
VPS13A-209ENST00000467124 MRPS14O60783 128 aaKnown RBP1.45□□□□□ -2.18
VPS13A-209ENST00000467124 GGCTO75223 188 aaKnown RBP1.45□□□□□ -2.18
VPS13A-209ENST00000467124 TRGC2P03986 189 aa1.45□□□□□ -2.18
VPS13A-209ENST00000467124 CD2P06729 351 aa1.45□□□□□ -2.18
VPS13A-209ENST00000467124 TEX261Q6UWH6 196 aa1.45□□□□□ -2.18
VPS13A-209ENST00000467124 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.45□□□□□ -2.18
VPS13A-209ENST00000467124 C12orf29Q8N999 325 aa1.45□□□□□ -2.18
VPS13A-209ENST00000467124 RETNLBQ9BQ08 111 aa1.45□□□□□ -2.18
VPS13A-209ENST00000467124 POPDC3Q9HBV1 291 aa1.45□□□□□ -2.18
VPS13A-209ENST00000467124 C14orf132Q9NPU4 83 aa1.45□□□□□ -2.18
VPS13A-209ENST00000467124 U3KQ87 197 aa1.45□□□□□ -2.18
VPS13A-209ENST00000467124 V9GYQ6 96 aa1.45□□□□□ -2.18
VPS13A-209ENST00000467124 PRRC2BQ5JSZ5 2229 aaKnown RBP1.45□□□□□ -2.18
VPS13A-209ENST00000467124 DIDO1Q9BTC0 2240 aaKnown RBP1.44□□□□□ -2.18
VPS13A-209ENST00000467124 CEP164Q9UPV0 1460 aa1.44□□□□□ -2.18
VPS13A-209ENST00000467124 OBSL1O75147 1896 aa1.44□□□□□ -2.18
VPS13A-209ENST00000467124 PPP5D1E7EU14 171 aa1.44□□□□□ -2.18
VPS13A-209ENST00000467124 GPR31O00270 319 aa1.44□□□□□ -2.18
VPS13A-209ENST00000467124 HLA-EP13747 358 aa1.44□□□□□ -2.18
VPS13A-209ENST00000467124 CNBPP62633 177 aaKnown RBP1.44□□□□□ -2.18
VPS13A-209ENST00000467124 MYL5Q02045 173 aa1.44□□□□□ -2.18
VPS13A-209ENST00000467124 FKBP1CQ5VVH2 108 aa1.44□□□□□ -2.18
VPS13A-209ENST00000467124 DCUN1D2Q6PH85 259 aa1.44□□□□□ -2.18
VPS13A-209ENST00000467124 UNQ6190/PRO20217Q6UXQ8 127 aa1.44□□□□□ -2.18
VPS13A-209ENST00000467124 OR4C6Q8NH72 309 aa1.44□□□□□ -2.18
VPS13A-209ENST00000467124 C10orf105Q8TEF2 133 aa1.44□□□□□ -2.18
VPS13A-209ENST00000467124 MALSU1Q96EH3 234 aa1.44□□□□□ -2.18
VPS13A-209ENST00000467124 CARD19Q96LW7 228 aa1.44□□□□□ -2.18
VPS13A-209ENST00000467124 PBOV1Q9GZY1 135 aa1.44□□□□□ -2.18
VPS13A-209ENST00000467124 BOLA2Q9H3K6 86 aa1.44□□□□□ -2.18
VPS13A-209ENST00000467124 MRPL40Q9NQ50 206 aaKnown RBP1.44□□□□□ -2.18
VPS13A-209ENST00000467124 TAS2R7Q9NYW3 318 aa1.44□□□□□ -2.18
VPS13A-209ENST00000467124 OR52A1Q9UKL2 312 aa1.44□□□□□ -2.18
VPS13A-209ENST00000467124 KLK9Q9UKQ9 250 aa1.44□□□□□ -2.18
VPS13A-209ENST00000467124 TAF1LQ8IZX4 1826 aa1.43□□□□□ -2.18
VPS13A-209ENST00000467124 UHRF1BP1Q6BDS2 1440 aa1.43□□□□□ -2.18
VPS13A-209ENST00000467124 ALPK2Q86TB3 2170 aa1.43□□□□□ -2.18
VPS13A-209ENST00000467124 IGKV3-7A0A075B6H7 116 aa1.43□□□□□ -2.18
VPS13A-209ENST00000467124 IGKV2-40A0A087WW87 121 aaPredicted RBP1.43□□□□□ -2.18
VPS13A-209ENST00000467124 IGKV2D-26A0A0A0MRZ7 120 aa1.43□□□□□ -2.18
VPS13A-209ENST00000467124 MAP1LC3B2A6NCE7 125 aa1.43□□□□□ -2.18
VPS13A-209ENST00000467124 A8MWV9 139 aa1.43□□□□□ -2.18
VPS13A-209ENST00000467124 IFNA14P01570 189 aa1.43□□□□□ -2.18
VPS13A-209ENST00000467124 IGKV2D-40P01614 121 aaPredicted RBP1.43□□□□□ -2.18
VPS13A-209ENST00000467124 C1orf137Q5JT78 98 aa1.43□□□□□ -2.18
VPS13A-209ENST00000467124 CROCCP2Q86T23 111 aa1.43□□□□□ -2.18
VPS13A-209ENST00000467124 ANGPTL5Q86XS5 388 aa1.43□□□□□ -2.18
VPS13A-209ENST00000467124 DEFB119Q8N690 84 aa1.43□□□□□ -2.18
VPS13A-209ENST00000467124 GRPEL2Q8TAA5 225 aa1.43□□□□□ -2.18
VPS13A-209ENST00000467124 TEX47Q8TBZ9 253 aa1.43□□□□□ -2.18
VPS13A-209ENST00000467124 TMEM70Q9BUB7 260 aa1.43□□□□□ -2.18
VPS13A-209ENST00000467124 GGACTQ9BVM4 153 aa1.43□□□□□ -2.18
VPS13A-209ENST00000467124 MAP1LC3BQ9GZQ8 125 aa1.43□□□□□ -2.18
VPS13A-209ENST00000467124 RNF11Q9Y3C5 154 aa1.43□□□□□ -2.18
VPS13A-209ENST00000467124 SOX21Q9Y651 276 aaPredicted RBP1.43□□□□□ -2.18
VPS13A-209ENST00000467124 DENND4CQ5VZ89 1909 aa1.42□□□□□ -2.18
VPS13A-209ENST00000467124 HYPMO75409 117 aa1.42□□□□□ -2.18
VPS13A-209ENST00000467124 C1orf134Q5TEV5 83 aa1.42□□□□□ -2.18
VPS13A-209ENST00000467124 PATE2Q6UY27 113 aa1.42□□□□□ -2.18
VPS13A-209ENST00000467124 OR5D14Q8NGL3 314 aa1.42□□□□□ -2.18
VPS13A-209ENST00000467124 TMEM254Q8TBM7 123 aa1.42□□□□□ -2.18
VPS13A-209ENST00000467124 CHCHD1Q96BP2 118 aaKnown RBP1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms