RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 CD55P08174 381 aa2.43□□□□□ -2.02
VPS13D-203ENST00000466732 MRPL3P09001 348 aaKnown RBP2.43□□□□□ -2.02
VPS13D-203ENST00000466732 H2BFMP0C1H6 154 aa2.43□□□□□ -2.02
VPS13D-203ENST00000466732 FAM236CP0DP71 79 aa2.43□□□□□ -2.02
VPS13D-203ENST00000466732 IGFBP3P17936 291 aaPredicted RBP2.43□□□□□ -2.02
VPS13D-203ENST00000466732 LOXP28300 417 aaPredicted RBP2.43□□□□□ -2.02
VPS13D-203ENST00000466732 MAGEA5P43359 124 aa2.43□□□□□ -2.02
VPS13D-203ENST00000466732 DLX1P56177 255 aa2.43□□□□□ -2.02
VPS13D-203ENST00000466732 CAV3P56539 151 aa2.43□□□□□ -2.02
VPS13D-203ENST00000466732 KRTAP10-1P60331 282 aa2.43□□□□□ -2.02
VPS13D-203ENST00000466732 SNRPFP62306 86 aaKnown RBP2.43□□□□□ -2.02
VPS13D-203ENST00000466732 SNRPGP62308 76 aaKnown RBP2.43□□□□□ -2.02
VPS13D-203ENST00000466732 HERVK_113P63121 156 aa2.43□□□□□ -2.02
VPS13D-203ENST00000466732 EGFEM1PQ0D2K5 195 aa2.43□□□□□ -2.02
VPS13D-203ENST00000466732 GTF3C1Q12789 2109 aa2.43□□□□□ -2.02
VPS13D-203ENST00000466732 IGFBP7Q16270 282 aa2.43□□□□□ -2.02
VPS13D-203ENST00000466732 DMRTC1Q5HYR2 192 aa2.43□□□□□ -2.02
VPS13D-203ENST00000466732 Q5XG85 94 aa2.43□□□□□ -2.02
VPS13D-203ENST00000466732 SLC25A34Q6PIV7 304 aa2.43□□□□□ -2.02
VPS13D-203ENST00000466732 MOB3BQ86TA1 216 aa2.43□□□□□ -2.02
VPS13D-203ENST00000466732 ATOH7Q8N100 152 aa2.43□□□□□ -2.02
VPS13D-203ENST00000466732 C1orf158Q8N1D5 194 aa2.43□□□□□ -2.02
VPS13D-203ENST00000466732 TMEM256Q8N2U0 113 aa2.43□□□□□ -2.02
VPS13D-203ENST00000466732 NPWQ8N729 165 aa2.43□□□□□ -2.02
VPS13D-203ENST00000466732 ZNF615Q8N8J6 731 aa2.43□□□□□ -2.02
VPS13D-203ENST00000466732 WDR31Q8NA23 367 aa2.43□□□□□ -2.02
VPS13D-203ENST00000466732 OR5H2Q8NGV7 314 aa2.43□□□□□ -2.02
VPS13D-203ENST00000466732 SCGB1C1Q8TD33 95 aa2.43□□□□□ -2.02
VPS13D-203ENST00000466732 C2orf15Q8WU43 125 aaKnown RBP2.43□□□□□ -2.02
VPS13D-203ENST00000466732 PPP1R1CQ8WVI7 109 aa2.43□□□□□ -2.02
VPS13D-203ENST00000466732 NEURL3Q96EH8 262 aa2.43□□□□□ -2.02
VPS13D-203ENST00000466732 ADAT3Q96EY9 351 aaPredicted RBP2.43□□□□□ -2.02
VPS13D-203ENST00000466732 SMIM14Q96QK8 99 aa2.43□□□□□ -2.02
VPS13D-203ENST00000466732 ZNF670Q9BS34 389 aa2.43□□□□□ -2.02
VPS13D-203ENST00000466732 AGMATQ9BSE5 352 aa2.43□□□□□ -2.02
VPS13D-203ENST00000466732 COMMD5Q9GZQ3 224 aa2.43□□□□□ -2.02
VPS13D-203ENST00000466732 TMEM191AQ9H0A3 160 aa2.43□□□□□ -2.02
VPS13D-203ENST00000466732 FBXL15Q9H469 300 aa2.43□□□□□ -2.02
VPS13D-203ENST00000466732 GLIPR2Q9H4G4 154 aa2.43□□□□□ -2.02
VPS13D-203ENST00000466732 REEP1Q9H902 201 aa2.43□□□□□ -2.02
VPS13D-203ENST00000466732 FGF20Q9NP95 211 aaPredicted RBP2.43□□□□□ -2.02
VPS13D-203ENST00000466732 MANBALQ9NQG1 85 aa2.43□□□□□ -2.02
VPS13D-203ENST00000466732 TAAR3PQ9P1P4 343 aa2.43□□□□□ -2.02
VPS13D-203ENST00000466732 SPRR3Q9UBC9 169 aa2.43□□□□□ -2.02
VPS13D-203ENST00000466732 RABAC1Q9UI14 185 aa2.43□□□□□ -2.02
VPS13D-203ENST00000466732 POLR1DQ9Y2S0 133 aa2.43□□□□□ -2.02
VPS13D-203ENST00000466732 MPC1Q9Y5U8 109 aa2.43□□□□□ -2.02
VPS13D-203ENST00000466732 KIAA1549Q9HCM3 1950 aa2.43□□□□□ -2.02
VPS13D-203ENST00000466732 DOCK9Q9BZ29 2069 aa2.43□□□□□ -2.02
VPS13D-203ENST00000466732 DOCK8Q8NF50 2099 aa2.42□□□□□ -2.02
VPS13D-203ENST00000466732 PTPRBP23467 1997 aa2.42□□□□□ -2.02
VPS13D-203ENST00000466732 hCG_1818297A0A087WSY0 165 aa2.42□□□□□ -2.02
VPS13D-203ENST00000466732 A0A1B0GV50 99 aa2.42□□□□□ -2.02
VPS13D-203ENST00000466732 EEF1E1-BLOC1S5C9J1V9 151 aa2.42□□□□□ -2.02
VPS13D-203ENST00000466732 H0YL77 283 aa2.42□□□□□ -2.02
VPS13D-203ENST00000466732 H3BTX0 84 aa2.42□□□□□ -2.02
VPS13D-203ENST00000466732 H3BUT2 72 aa2.42□□□□□ -2.02
VPS13D-203ENST00000466732 OVOL1O14753 267 aa2.42□□□□□ -2.02
VPS13D-203ENST00000466732 PITX3O75364 302 aa2.42□□□□□ -2.02
VPS13D-203ENST00000466732 DPM2O94777 84 aa2.42□□□□□ -2.02
VPS13D-203ENST00000466732 LSM8O95777 96 aaKnown RBP2.42□□□□□ -2.02
VPS13D-203ENST00000466732 IGHMP01871 453 aa2.42□□□□□ -2.02
VPS13D-203ENST00000466732 APOC2P02655 101 aa2.42□□□□□ -2.02
VPS13D-203ENST00000466732 MT-ND6P03923 174 aa2.42□□□□□ -2.02
VPS13D-203ENST00000466732 IGF1P05019 195 aa2.42□□□□□ -2.02
VPS13D-203ENST00000466732 SLC25A5P05141 298 aaKnown RBP2.42□□□□□ -2.02
VPS13D-203ENST00000466732 LGALS1P09382 135 aaKnown RBP2.42□□□□□ -2.02
VPS13D-203ENST00000466732 ZNF708P17019 499 aa2.42□□□□□ -2.02
VPS13D-203ENST00000466732 GABRG2P18507 467 aa2.42□□□□□ -2.02
VPS13D-203ENST00000466732 VDAC1P21796 283 aa2.42□□□□□ -2.02
VPS13D-203ENST00000466732 OPRK1P41145 380 aa2.42□□□□□ -2.02
VPS13D-203ENST00000466732 PPICP45877 212 aa2.42□□□□□ -2.02
VPS13D-203ENST00000466732 NMUP48645 174 aa2.42□□□□□ -2.02
VPS13D-203ENST00000466732 EMDP50402 254 aa2.42□□□□□ -2.02
VPS13D-203ENST00000466732 KRTDAPP60985 99 aa2.42□□□□□ -2.02
VPS13D-203ENST00000466732 GGTLC2Q14390 218 aa2.42□□□□□ -2.02
VPS13D-203ENST00000466732 ATXN7L3Q14CW9 347 aaPredicted RBP2.42□□□□□ -2.02
VPS13D-203ENST00000466732 ZNF141Q15928 474 aa2.42□□□□□ -2.02
VPS13D-203ENST00000466732 CLEC12BQ2HXU8 276 aa2.42□□□□□ -2.02
VPS13D-203ENST00000466732 LCE1CQ5T751 118 aa2.42□□□□□ -2.02
VPS13D-203ENST00000466732 LCE1BQ5T7P3 118 aa2.42□□□□□ -2.02
VPS13D-203ENST00000466732 MORN3Q6PF18 240 aaPredicted RBP2.42□□□□□ -2.02
VPS13D-203ENST00000466732 ZNF322Q6U7Q0 402 aaPredicted RBP2.42□□□□□ -2.02
VPS13D-203ENST00000466732 AMTNQ6UX39 209 aa2.42□□□□□ -2.02
VPS13D-203ENST00000466732 SLC25A48Q6ZT89 311 aaKnown RBP2.42□□□□□ -2.02
VPS13D-203ENST00000466732 ANKRD37Q7Z713 158 aa2.42□□□□□ -2.02
VPS13D-203ENST00000466732 EXOC3-AS1Q8N2X6 119 aa2.42□□□□□ -2.02
VPS13D-203ENST00000466732 CYB561D1Q8N8Q1 229 aa2.42□□□□□ -2.02
VPS13D-203ENST00000466732 NFAM1Q8NET5 270 aaPredicted RBP2.42□□□□□ -2.02
VPS13D-203ENST00000466732 OR4X2Q8NGF9 303 aa2.42□□□□□ -2.02
VPS13D-203ENST00000466732 OR2T10Q8NGZ9 312 aa2.42□□□□□ -2.02
VPS13D-203ENST00000466732 OR4K13Q8NH42 304 aa2.42□□□□□ -2.02
VPS13D-203ENST00000466732 CT55Q8WUE5 264 aa2.42□□□□□ -2.02
VPS13D-203ENST00000466732 AQP3Q92482 292 aa2.42□□□□□ -2.02
VPS13D-203ENST00000466732 AMELYQ99218 206 aa2.42□□□□□ -2.02
VPS13D-203ENST00000466732 C20orf78Q9BR46 151 aa2.42□□□□□ -2.02
VPS13D-203ENST00000466732 NMES1Q9C002 83 aa2.42□□□□□ -2.02
VPS13D-203ENST00000466732 CHST6Q9GZX3 395 aa2.42□□□□□ -2.02
VPS13D-203ENST00000466732 CST11Q9H112 138 aa2.42□□□□□ -2.02
VPS13D-203ENST00000466732 PLEKHF2Q9H8W4 249 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms